Search results for "ICO"

showing 10 items of 30544 documents

Reconstruction and analysis of genome-scale metabolic model of a photosynthetic bacterium

2010

Abstract Background Synechocystis sp. PCC6803 is a cyanobacterium considered as a candidate photo-biological production platform - an attractive cell factory capable of using CO2 and light as carbon and energy source, respectively. In order to enable efficient use of metabolic potential of Synechocystis sp. PCC6803, it is of importance to develop tools for uncovering stoichiometric and regulatory principles in the Synechocystis metabolic network. Results We report the most comprehensive metabolic model of Synechocystis sp. PCC6803 available, iSyn669, which includes 882 reactions, associated with 669 genes, and 790 metabolites. The model includes a detailed biomass equation which encompasses…

0106 biological sciencesSystems biologyIn silicoMetabolic networkComputational biologyBiologyModels Biological01 natural sciencesMetabolic engineeringGene Knockout Techniques03 medical and health sciencesStructural BiologyModelling and Simulation010608 biotechnologyBotanyBiomassPhotosynthesislcsh:QH301-705.5Molecular Biology030304 developmental biologyAutotrophic Processes0303 health sciencesGene Expression ProfilingApplied MathematicsSynechocystisSynechocystisGenomicsDarknessbiology.organism_classificationComputer Science ApplicationsFlux balance analysislcsh:Biology (General)Genes BacterialAutotrophic ProcessesModeling and SimulationEnergy sourceGenome BacterialResearch ArticleBMC Systems Biology
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Arbuscular mycorrhiza and fungal root endophytes of weeds in an altitudinal gradient in the Pamir Alai Mountains of Central Asia

2014

Arbuscular mycorrhiza and fungal root endophytes of three weeds, Galium tricornutum, Lycopsis orientalis and Scandix pecten-veneris, were studied in an altitudinal gradient of the Pamir Alai Mountains. Colonisation by arbuscular mycorrhizal fungi (AMF) was found in all species. Only in the case of G. tricornutum was there a rise in mycorrhizal parameters values found for the medium altitude range. Similar tendencies were observed in the case of the AMF colonisation potential assessment. This suggests that plant species' identity, dependency on symbiosis and interactions with soil properties determine root colonisation and the abundance of AMF in soils at the elevations in question. Four AMF…

0106 biological sciencesTajikistanGalium tricornutumdark septate endophytesRange (biology)arbuscular mycorrhizal fungiPlant Science01 natural sciencesGlomeromycotaSymbiosisBotanyOlpidiumGlomeromycotaarbuscular mycorrhizal fungi species diversityEcology Evolution Behavior and Systematicsbiology04 agricultural and veterinary sciencesbiology.organism_classificationarable soilLycopsisArbuscular mycorrhizaColonisation040103 agronomy & agriculture0401 agriculture forestry and fisheriesOlpidiumArable soil010606 plant biology & botanyPlant Biosystems : An International Journal Dealing with all Aspects of Plant Biology : Official Journal of the Societa Botanica Italiana
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An account on the taxonomy and molecular diversity of a marine rock-pool dweller, Tigriopus fulvus (Copepoda, Harpacticoida)

2019

[ES] El género de copépodos Tigriopus Norman, 1869 se distribuye en todo el mundo en charcas de rocas costeras y se considera que actualmente incluye 14 especies válidas. Tigriopus fulvus (Fischer 1860), con sus subespecies Tigriopus fulvus adriaticus Van Douwe 1913 y Tigriopus fulvus algiricus Monard 1935, y Tigriopus minutus Bozic 1960 han sido descritos para el área del Mediterráneo, pero la diversidad real del género es desconocida actualmente. El objetivo de este estudio fue evaluar la identidad real de las poblaciones mediterráneas de Tigriopus y dilucidar su taxonomía y patrón de diversidad genética. Con este fin, se secuenció un fragmento del gen de ADN mitocondrial (citocromo c oxi…

0106 biological sciencesTigriopusZOOLOGIATaxonomía basada en ADNSettore BIO/05 - ZoologiaZoologyMonopolización periódicaAquatic ScienceSubspecies01 natural sciencesHarpacticoidaDNA taxonomyTECNOLOGIA DEL MEDIO AMBIENTEgeographyGenetic diversitygeography.geographical_feature_categorybiologyGenetic structuring010604 marine biology & hydrobiologyCytochrome c oxidase subunit Igenetic structuring clockwork monopolization rocky shore communities cryptic species DNA taxonomyComunidades de costas rocosasbiology.organism_classificationEstructuración genéticaRocky shore communitiesGenetic structureCryptic speciesClockwork monopolizationTaxonomy (biology)Especies crípticasestructuración genética monopolización periódica comunidades de costas rocosas especies crípticas taxonomía basada en ADNTide pool
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The plasma membrane oxidase NtrbohD is responsible for AOS production in elicited tobacco cells

2002

Summary A cDNA encoding a protein, NtrbohD, located on the plasma membrane and homologue to the flavocytochrome of the neutrophil NADPH oxidase, was cloned in tobacco. The corresponding mRNA was accumulated when tobacco leaves and cells were treated with the fungal elicitor cryptogein. After elicitation with cryptogein, tobacco cells transformed with antisense constructs of NtrbohD showed the same extracellular alkalinization as the control, but no longer produced active oxygen species (AOS). This work represents the first demonstration of the function of a homologue of gp91–phox in AOS production in elicited tobacco cells.

0106 biological sciencesTime FactorsNicotiana tabacumMolecular Sequence DataPlant ScienceBiologyGenes Plant01 natural sciencesFungal Proteins[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciences[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants geneticsComplementary DNATobaccoGene expressionGeneticsExtracellularAOSAmino Acid SequenceRNA MessengerCells CulturedComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesOxidase testNADPH oxidaseGene Expression ProfilingAlgal ProteinsCell MembraneHydrogen PeroxideCell BiologyHydrogen-Ion ConcentrationPlants Genetically Modifiedbiology.organism_classification3. Good healthElicitorCell biologyPlant LeavesProtein TransportBiochemistryCell culturebiology.proteinOxidoreductasesReactive Oxygen Species010606 plant biology & botany
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Cytosolic calcium rises and related events in ergosterol-treated Nicotiana cells

2011

International audience; The typical fungal membrane component ergosterol was previously shown to trigger defence responses and protect plants against pathogens. Most of the elicitors mobilize the second messenger calcium, to trigger plant defences. We checked the involvement of calcium in response to ergosterol using Nicotiana plumbaginifolia and Nicotiana tabacum cv Xanthi cells expressing apoaequorin in the cytosol. First, it was verified if ergosterol was efficient in these cells inducing modifications of proton fluxes and increased expression of defence-related genes. Then, it was shown that ergosterol induced a rapid and transient biphasic increase of free [Ca2þ]cyt which intensity dep…

0106 biological sciencesTime FactorsPhysiologyNicotiana tabacumPlant SciencesterolsSecond Messenger Systemstobacco01 natural scienceschemistry.chemical_compoundCytosolpolycyclic compoundsPhosphorylationCalcium signalingreactive oxygen species0303 health sciencesErgosterolelicitorbiologyergosterolHydrogen-Ion ConcentrationPlants Genetically ModifiedRecombinant ProteinsCell biologyBiochemistrySecond messenger systemReactive oxygen species; Calcium signature; Elicitor; Signal transduction; MAPKs; tobaccolipids (amino acids peptides and proteins)Protonssignal transductionCell Survivalnicotiana plumbaginifoliachemistry.chemical_elementnicotiana tabacumoxydantCalciumcalcium signature03 medical and health sciencesAequorinMAPKsBAPTAGenetics[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyCalcium Signaling030304 developmental biologyMitogen-Activated Protein Kinase KinasesCalcium metabolismHydrogen Peroxidebiochemical phenomena metabolism and nutritionbiology.organism_classificationCytosolchemistryCalciumApoproteins010606 plant biology & botany
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Effects of gellan-based coating application on litchi fruit quality traits

2018

The use of gellan-based coating formulation on litchi (Litchi chinensis Sonn. ‘Wai Chee’) fruit was investigated in order to determine its ability to improve color conservation and to maintain the overall quality. Fruits were treated with gellanbased coating (0.5% w/v) and glycerol (3% w/v) after dipping in ascorbic acid (1.5% w/v) and then stored at 5°C and 90% relative humidity for 15 days. Changes in peel color, soluble solid content, tritatable acidity, weight loss, antioxidant activity and phenolic content, were measured. Formulations containing gellan-based coating exhibited slightly improved water barrier properties and showed their active role in maintaining color characteristics an…

0106 biological sciencesTitratable acid04 agricultural and veterinary sciencesHorticultureengineering.materialAscorbic acid01 natural sciencesGellan gumSettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboreechemistry.chemical_compoundLitchi fruitLitchi chinensis ‘Wai Chee’ color phenolic content ascorbic acid antioxidant activitychemistryCoatingSoluble solidsSettore BIO/10 - Biochimica040103 agronomy & agricultureGlycerolengineering0401 agriculture forestry and fisheriesRelative humidityFood science010606 plant biology & botanyActa Horticulturae
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Hydrology Affects Environmental and Spatial Structuring of Microalgal Metacommunities in Tropical Pacific Coast Wetlands

2016

The alternating climate between wet and dry periods has important effects on the hydrology and therefore on niche-based processes of water bodies in tropical areas. Additionally, assemblages of microorganism can show spatial patterns, in the form of a distance decay relationship due to their size or life form. We aimed to test spatial and environmental effects, modulated by a seasonal flooding climatic pattern, on the distribution of microalgae in 30 wetlands of a tropical dry forest region: the Pacific coast of Costa Rica and Nicaragua. Three surveys were conducted corresponding to the beginning, the highest peak, and the end of the hydrological year during the wet season, and species abun…

0106 biological sciencesTopographyMarine and Aquatic Scienceslcsh:MedicineWetlandNicaragua01 natural sciencesGeographical locationsFloodingTropical climateMicroalgaelcsh:ScienceMultidisciplinarygeography.geographical_feature_categoryGeographyEcologyPlantsPlanktonPlanktonGeography551.48 HidrologíaSeasonsResearch ArticleFreshwater EnvironmentsWet seasonTropical and subtropical dry broadleaf forestsCosta RicaHidrologíaAlgaePacífico tropical010603 evolutionary biologySurface WaterAnimalsRelative species abundanceHydrologyDistance decayLandformsTropical ClimatePacific Ocean010604 marine biology & hydrobiologyEcology and Environmental Scienceslcsh:ROrganismsAquatic EnvironmentsBiology and Life SciencesGeomorphologyCentral AmericaInvertebratesWetlandsPhytoplanktonNorth AmericaEarth SciencesSpatial ecologylcsh:QHydrologyPeople and places
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Trace element storage capacity of sediments in deadPosidonia oceanicamat from a chronically contaminated marine ecosystem

2016

Posidonia oceanica mat is considered a long-term bioindicator of contamination. Storage and sequestration of trace elements and organic carbon (Corg) were assessed in dead P. oceanica mat and bare sediments from a highly polluted coastal marine area (Augusta Bay, central Mediterranean). Sediment elemental composition and sources of organic matter have been altered since the 1950s. Dead P. oceanica mat displayed a greater ability to bury and store trace elements and Corg than nearby bare sediments, acting as a long-term contaminant sink over the past 120?yr. Trace elements, probably associated with the mineral fraction, were stabilized and trapped despite die-off of the overlying P. oceanica…

0106 biological sciencesTotal organic carbonchemistry.chemical_classificationbiologyEcology010604 marine biology & hydrobiologyHealth Toxicology and MutagenesisTrace elementSediment010501 environmental sciencesbiology.organism_classification01 natural sciencesDredgingchemistryPosidonia oceanicaEnvironmental chemistryEnvironmental ChemistryEnvironmental scienceOrganic matterBioindicatorBay0105 earth and related environmental sciencesEnvironmental Toxicology and Chemistry
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Co-inertia multivariate approach for the evaluation of anthropogenic impact on two commercial fish along Tyrrhenian coasts

2019

Abstract Aliphatic hydrocarbon levels were determined by the GC/MS technique in fish livers of Engraulis encrasicolus (Ee) and Trachurus trachurus (Tt), collected from a particular area of the Mediterranean Sea, called GSA 10, which is located exactly in Tyrrhenian Sea between Campania coast and North Sicily coast. The aim was to evaluate their potential use as specific bioindicators towards this class of contaminants. Both Tt and Ee are considered to be pollution monitoring bioindicators, due to their dominance in marine communities and economic fishing interest. Ee showed a higher tendency to bioaccumulate TAHs, due to the lower quantity of fatty acids in liver tissues with respect to Tt.…

0106 biological sciencesTrachurus trachurusHealth Toxicology and MutagenesisTotal aliphatic hydrocarbonFisheries010501 environmental sciencesEcotoxicology01 natural sciencesMediterranean seaWater columnEngraulisMediterranean SeaAnimalsEcotoxicologyDominance (ecology)Settore CHIM/01 - Chimica Analitica14. Life underwaterSicily0105 earth and related environmental sciencesEnvironmental Biomarkersbiology010604 marine biology & hydrobiologyWater PollutionPublic Health Environmental and Occupational HealthGeneral MedicineBiomarkerbiology.organism_classificationCo-inertia analysis (CIA)PollutionSalinitySeafood13. Climate actionEnvironmental chemistryBioaccumulationMultivariate AnalysisEnvironmental scienceBioindicatorEngraulis encrasicoluEnvironmental Monitoring
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Characterization of Legal Psychology through psychology journals included in Criminology & Penology and Law categories of Web of Science

2017

The objective of this work is to learn about the most relevant aspects that characterize contemporary Legal Psychology throughout the study of journals included in the WoS between the years 2009 and 2014 related with the area of Psychology. The number of selected publications is 16, mainly from the USA and Great Britain. The results show an increase in the number of works and authors, a greater collaboration and a growth in medium productors. It exists a major presence of men in editorial boards and as authors, outstanding the figures of T. Ward in 2009 and A. Vrij in 2014. According to the analysis of key words the most relevant themes during these years have been Crime, Conduct, Woman and…

0106 biological sciencesTypologyResearch topicsSexual violenceGender violenceWeb of scienceBibliometry05 social sciencesGenderCriminology01 natural sciences050105 experimental psychologyTemas de investigaciónLegal psychologyLegal Psychology010608 biotechnologyBibliometríaWeb of ScienceGénero0501 psychology and cognitive sciencesPsychologyPsicología JurídicaGeneral PsychologyPenologyAnales de Psicología
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