Search results for "INOS"

showing 10 items of 2075 documents

Intracellular signal transduction pathways in sponges.

1990

Abstract Sponges are the lowest multicellular eukaryotic organisms. Due to the relatively low specialization, and concomitantly the high differentiation and dedifferentiation potency of their cells, the sponge cell system has proven to be a useful model to study the mechanism of cell-cell adhesion on molecular levels. Results of detailed biochemical and cell biological studies with the main cell adhesion molecules, the aggregation factor (AF) and the aggregation receptor, led to the formation of the modulation theory of cell adhesion. The events of cell adhesion are contigent on a multiplicity of precisely coordinated intracellular signal transduction pathways. Using the marine sponge Geodi…

DNA synthesisCell adhesion moleculeCellMembrane ProteinsGeneral MedicineBiologyCell biologyPoriferaIntracellular signal transductionchemistry.chemical_compoundMicroscopy Electronmedicine.anatomical_structurechemistryLectinsmedicineCell AdhesionPhosphorylationAnimalsPhosphatidylinositolCell adhesionProtein kinase CProtein Kinase CSignal TransductionElectron microscopy reviews
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Bronchial microbiome, PA biofilm-forming capacity and exacerbation in severe COPD patients colonized by P. aeruginosa

2017

Aim: The bronchial microbiome of severe chronic obstructive pulmonary disease patients colonized by Pseudomonas aeruginosa was analyzed using 16S rRNA gene sequencing to identify differences related to biofilm-forming capacity. Patients & methods: Patient sputum samples from 21 patients were studied. Results: Statistically significant differences related to biofilm-forming capacity were only found for genera with relative abundances <1%, and Fusobacterium was over-represented when biofilm-forming capacity was high. Genera with relative abundances >50% which increased from baseline were observed in 10/14 exacerbations, but corresponded to Pseudomonas only in three episodes, while …

DNA Bacterial0301 basic medicineMicrobiology (medical)Lung microbiomeExacerbation030106 microbiologyBronchiSevere copdmedicine.disease_causeDNA RibosomalMicrobiologyMicrobiologyPulmonary Disease Chronic Obstructive03 medical and health sciences0302 clinical medicineRNA Ribosomal 16SmedicineHumansPseudomonas InfectionsMicrobiomebiologyPseudomonas aeruginosaMicrobiotaPseudomonasSputumBiofilmSequence Analysis DNAbiology.organism_classification030228 respiratory systemBiofilmsPseudomonas aeruginosaSputummedicine.symptomFuture Microbiology
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Long-term effects of crop management on Rhizobium leguminosarum biovar viciae populations.

2004

Little is known about factors that affect the indigenous populations of rhizobia in soils. We compared the abundance, diversity and genetic structure of Rhizobium leguminosarum biovar viciae populations in soils under different crop managements, i.e., wheat and maize monocultures, crop rotation, and permanent grassland. Rhizobial populations were sampled from nodules of pea- or vetch plants grown in soils collected at three geographically distant sites in France, each site comprising a plot under long-term maize monoculture. Molecular characterization of isolates was performed by PCR-restriction fragment length polymorphism of 16S-23S rDNA intergenic spacer as a neutral marker of the genomi…

DNA BacterialBiovarPopulation Dynamicsmedicine.disease_causePoaceaeApplied Microbiology and BiotechnologyMicrobiologyPolymerase Chain ReactionZea maysRhizobium leguminosarumRhizobiaCrop03 medical and health sciencesRNA Ribosomal 16SBotanymedicinePoaceae[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyComputingMilieux_MISCELLANEOUSSoil MicrobiologyTriticum030304 developmental biology2. Zero hunger0303 health sciencesGenetic diversityRhizobium leguminosarumEcologybiologyfood and beveragesAgriculture04 agricultural and veterinary sciencesBiodiversity15. Life on landbiology.organism_classification[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyAgronomy040103 agronomy & agricultureNitrogen fixation0401 agriculture forestry and fisheriesMonocultureFEMS microbiology ecology
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Biodiversity and dairy traits of lactic acid bacteria from foliage of aromatic plants before and after dehydration process monitored by a smart senso…

2020

ABSTRACT The main hypothesis of this work was to evaluate the presence of lactic acid bacteria (LAB) intrinsically resistant to plant essential oils in sage (Salvia officinalis L.) and laurel (Laurus nobilis), for future applications in functional cheese production by addition of aromatic herbs. The effect of the drying process on the viability of LAB was evaluated with three biomass densities (3, 4 and 5 kg/m2). The drying densities did not affect weight loss, but influenced the levels of LAB of sage and laurel. A total of 10 different strains of Enterococcus faecium, Enterococcus mundtii, Enterococcus raffinosus and Leuconostoc mesenteroides were identified from laurel, while sage did not…

DNA BacterialHot TemperatureEnterococcus mundtiived/biology.organism_classification_rank.speciesMicrobial Sensitivity TestsMicrobiologyLauraceaefoodLaurus nobilisCheeseLactobacillalesRNA Ribosomal 16Ssmart systemGeneticsdryingFood scienceDesiccationSalvia officinalisMolecular BiologyPhylogenyMicrobial Viabilitybiologyved/biologyChemistryEnterococcus raffinosusSAGESalvia officinalisSettore AGR/09 - Meccanica Agrariafood and beveragesBiodiversitybiology.organism_classificationfood.foodAnti-Bacterial AgentsRandom Amplified Polymorphic DNA Techniquelactic acid bacterialaurelsageEnterococcusLeuconostoc mesenteroidesFood Microbiologydairy potentialSettore AGR/16 - Microbiologia AgrariaEnterococcus faeciumFEMS Microbiology Letters
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Bronchial microbiome of severe COPD patients colonised by Pseudomonas aeruginosa

2014

The bronchial microbiome in severe COPD during stability and exacerbation in patients chronically colonised by Pseudomonas aeruginosa (PA), has not been defined. Our objective was to determine the characteristics of the bronchial microbiome of severe COPD patients colonised and not colonised by P. aeruginosa and its changes during exacerbation. COPD patients with severe disease and frequent exacerbations were categorised according to chronic colonisation by P. aeruginosa. Sputum samples were obtained in stability and exacerbation, cultured, and analysed by 16S rRNA gene amplification and pyrosequencing. Sixteen patients were included, 5 of them showing chronic colonisation by P. aeruginosa.…

DNA BacterialMaleMicrobiology (medical)ExacerbationMolecular Sequence DataBronchiBiologymedicine.disease_causeDNA RibosomalArticleMicrobiologyCohort StudiesPulmonary Disease Chronic ObstructiveRNA Ribosomal 16SHaemophilusmedicineCluster AnalysisHumansMicrobiomeMoraxellaPhylogenyAgedAged 80 and overStreptococcusPseudomonas aeruginosaMicrobiotaSputumGeneral MedicineSequence Analysis DNAMiddle Agedbiology.organism_classificationrespiratory tract diseasesColonisationInfectious DiseasesSputumFemalemedicine.symptomEuropean Journal of Clinical Microbiology & Infectious Diseases
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A novel VIM‐type metallo‐beta‐lactamase (VIM‐14) in a Pseudomonas aeruginosa clinical isolate from a neonatal intensive care unit

2011

AbstractA Pseudomonas aeruginosa highly resistant to carbapenems was isolated in a neonatal intensive care unit in Palermo, Italy. The strain was found to carry a novel VIM‐type enzyme, classified as VIM‐14. The novel enzyme differs from VIM‐4 in a G31S mutation. VIM‐14 was harboured in a class 1 integron with a new organization. The integron carried the genes aac7, blaVIM‐14, blaOXA‐20 and aac4 in that order.

DNA BacterialMicrobiology (medical)Settore MED/07 - Microbiologia E Microbiologia ClinicaNeonatal intensive care unitSettore MED/17 - Malattie Infettivemetallo-b-lactamaseAntibiotic resistancemetallo-β-lactamasemedicine.medical_treatmentMolecular Sequence DataMicrobial Sensitivity TestsBiologySettore MED/42 - Igiene Generale E Applicatamedicine.disease_causeIntegronbeta-LactamasesIntegronscarbapenemlaw.inventionMicrobiologyAntibiotic resistancelawDrug Resistance Multiple BacterialIntensive Care Units Neonatalpolycyclic compoundsmedicineHumansVIM-14Antibacterial agentBase SequencePseudomonas aeruginosaInfant Newbornmetallo‐β‐lactamaseAntibiotic resistance; carbapenems; metallo-b-lactamase; Pseudomonas aeruginosa; VIM-14Sequence Analysis DNAGeneral Medicinebiochemical phenomena metabolism and nutritionbacterial infections and mycosesbiology.organism_classificationIntensive care unitInfectious DiseasesPseudomonas aeruginosaBeta-lactamasebiology.proteinbacteriacarbapenemsVIM‐14PseudomonadaceaeClinical Microbiology and Infection
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Role of two operators in regulating the plasmid-borne raf operon of Escherichia coli

1994

The plasmid-borne raf operon encodes functions required for the inducible uptake and utilization of raffinose in Escherichia coli K12. The expression of three structural genes for alpha-galactosidase (rafA), Raf permease (rafB) and sucrose hydrolase (rafD) is negatively controlled by the binding of RafR repressor (rafR) to two operator sites, O1 and O2, that flank the -35 sequence of the raf promoter, PA. In vitro, O1 and O2 are occupied on increasing the concentration of RafR, without detectable preference for one site or the other or any indication of cooperative binding. Nucleotide substitutions at positions 3, 4 or 5 in an operator half-site prevented repressor binding, supporting a mod…

DNA BacterialOperator Regions GeneticOperonBase pairMolecular Sequence DataRepressorBiologyBinding CompetitiveRaffinoseTranscription (biology)OperonEscherichia coliGeneticsBinding siteSite-directed mutagenesisMolecular BiologyBase SequenceHelix-Loop-Helix MotifsStructural geneCooperative bindingGene Expression Regulation BacterialDNA-Binding ProteinsRepressor ProteinsBiochemistryGenes Bacterialalpha-GalactosidaseMutagenesis Site-DirectedAutoradiographyElectrophoresis Polyacrylamide GelPlasmidsMolecular and General Genetics MGG
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Use of nodulation pattern, stress tolerance, nodC gene amplification, RAPD-PCR and RFLP-16S rDNA analysis to discriminate genotypes of Rhizobium legu…

2005

Twenty-seven new Rhizobium isolates were obtained from root nodules of wild and crop legumes belonging to the genera Vicia, Lathyrus and Pisum from different agroecological areas in central and southern Italy. A polyphasic approach including phenotypic and genotypic techniques was used to study their diversity and their relationships with other biovars and species of rhizobia. Analysis of symbiotic properties and stress tolerance tests revealed that wild isolates, showed a wide spectrum of nodulation and a marked variation in stress tolerance compared with reference strains tested in this study. All rhizobial isolates (except for the isolate CG4 from Galega officinalis) were presumptively i…

DNA BacterialRoot noduleGenotypeStress toleranceBiologymedicine.disease_causeN-AcetylglucosaminyltransferasesApplied Microbiology and BiotechnologyMicrobiologyDNA RibosomalPolymerase Chain ReactionMediterranean areaRhizobium leguminosarumRhizobiaBacterial ProteinsRhizobium leguninosarumNodC geneStress toleranceWild legumesStrains diversityMediterranean areaSymbiotic characteristicsRNA Ribosomal 16SmedicineSymbiosisEcology Evolution Behavior and SystematicsGeneticsPrincipal Component AnalysisRhizobium leguminosarumfood and beveragesFabaceaeNucleic acid amplification techniqueNodC geneHydrogen-Ion ConcentrationRhizobium leguninosarum16S ribosomal RNAbiology.organism_classificationStrains diversitySymbiotic characteristicsRAPDBacterial Typing TechniquesRandom Amplified Polymorphic DNA TechniqueRhizobiumWild legumeRestriction fragment length polymorphismNucleic Acid Amplification TechniquesPolymorphism Restriction Fragment LengthSettore AGR/16 - Microbiologia Agraria
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The rise and the fall of a Pseudomonas aeruginosa endemic lineage in a hospital

2021

The biological features that allow a pathogen to survive in the hospital environment are mostly unknown. The extinction of bacterial epidemics in hospitals is mostly attributed to changes in medical practice, including infection control, but the role of bacterial adaptation has never been documented. We analysed a collection of Pseudomonas aeruginosa isolates belonging to the Besançon Epidemic Strain (BES), responsible for a 12year nosocomial outbreak, using a genotype-to-phenotype approach. Bayesian analysis estimated the emergence of the clone in the hospital 5 years before its opening, during the creation of its water distribution network made of copper. BES survived better than the refe…

DNA Bacterialparallel evolutionLineage (genetic)Genomic IslandsPathogens and EpidemiologyBiologymedicine.disease_causeAmoeba (operating system)Disease OutbreaksMicrobiology03 medical and health sciencesAntibiotic resistanceDrug Resistance Multiple BacterialGenomic islandbacterial pathogensmedicineHumansPseudomonas InfectionsPathogenGenome size[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyResearch Articles030304 developmental biology0303 health sciencesoutbreak030306 microbiologyPseudomonas aeruginosahigh-risk cloneOutbreakBayes TheoremSequence Analysis DNAGeneral MedicineHospitals3. Good healthPhenotype[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyPseudomonas aeruginosa
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Analysis of the Ush2a Gene in Medaka Fish (Oryzias latipes)

2013

Patients suffering from Usher syndrome (USH) exhibit sensorineural hearing loss, retinitis pigmentosa (RP) and, in some cases, vestibular dysfunction. USH is the most common genetic disorder affecting hearing and vision and is included in a group of hereditary pathologies associated with defects in ciliary function known as ciliopathies. This syndrome is clinically classified into three types: USH1, USH2 and USH3. USH2 accounts for well over one-half of all Usher cases and mutations in the USH2A gene are responsible for the majority of USH2 cases, but also for atypical Usher syndrome and recessive non-syndromic RP. Because medaka fish (Oryzias latypes) is an attractive model organism for ge…

DNA ComplementaryEmbryo NonmammalianTime FactorsUsher syndromeOryziasved/biology.organism_classification_rank.speciesMolecular Sequence DataOryziaslcsh:MedicineCiliopathiesRetinaMorpholinosEvolution MolecularRetinitis pigmentosamedicineotorhinolaryngologic diseasesAnimalsHumansAmino Acid SequenceModel organismlcsh:ScienceZebrafishIn Situ HybridizationRegulation of gene expressionGeneticsExtracellular Matrix ProteinsMultidisciplinarybiologyved/biologylcsh:RGenetic disorderGene Expression Regulation Developmentalmedicine.diseasebiology.organism_classificationPhenotypeEar Innerlcsh:Qsense organsResearch ArticlePLoS ONE
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