Search results for "INTERFACE"

showing 10 items of 2139 documents

Characterization of isomeric 1,2,4-oxadiazolyl-N-methylpyridinium salts by electrospray ionization tandem mass spectrometry.

2007

The mass spectrometric behavior of 1,2,4-oxadiazolyl- N-methylpyridinium salts has been investigated. These substances are of current interest as perspective ionic liquids, compounds used as green solvents for synthesis, and for their catalytic properties. The studies have been developed through electrospray ionization tandem mass spectrometry (ESI-MS/MS) experiments. The obtained results demonstrate a ready distinction between the two isomeric classes, 3- N-methylpyridinium- and 5- N-methylpyridinium-1,2,4-oxadiazoles, is possible through ESI-MS/MS experiments. A deeper investigation on the principal fragmentation pathways of characteristic ions has been also developed.

Models MolecularSpectrometry Mass Electrospray IonizationProtein mass spectrometry020209 energyElectrospray ionizationIonic Liquids02 engineering and technologyTandem mass spectrometrySample preparation in mass spectrometrychemistry.chemical_compoundIsomerismESI-MS ionic kiquids oxadiazolylpyridiniumComputational chemistry0202 electrical engineering electronic engineering information engineeringDirect electron ionization liquid chromatography–mass spectrometry interfaceSpectroscopyChromatographySelected reaction monitoringExtractive electrospray ionizationGeneral MedicineAtomic and Molecular Physics and OpticschemistryModels ChemicalSpectrometry Mass Matrix-Assisted Laser Desorption-IonizationIonic liquidSaltsEuropean journal of mass spectrometry (Chichester, England)
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Application of molecular topology to the prediction of the antimalarial activity of a group of uracil-based acyclic and deoxyuridine compounds.

2008

A topological-mathematical model has been arranged to search for new derivatives of deoxyuridine and related compounds acting as antimalarials against Plasmodium falciparum. By using linear discriminant and multilinear regression analysis a model with two functions was capable to predict adequately the IC(50) for each compound of the training and test series. After carrying out a virtual screening based upon such a model, new structures potentially active against P. falciparum are proposed.

Models MolecularStereochemistryChemistry PharmaceuticalPlasmodium falciparumPharmaceutical ScienceQuantitative Structure-Activity Relationshipchemistry.chemical_compoundAntimalarialsUser-Computer Interfaceparasitic diseasesAnimalsTechnology PharmaceuticalComputer SimulationUracilTopology (chemistry)Virtual screeningbiologyMolecular StructureDiscriminant AnalysisUracilPlasmodium falciparumLinear discriminant analysisbiology.organism_classificationDeoxyuridineDeoxyuridinechemistryDrug DesignComputer-Aided DesignRegression AnalysisMultiple linear regression analysisMolecular topologyInternational journal of pharmaceutics
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Delivery modulation in silica mesoporous supports via alkyl chain pore outlet decoration

2012

This article focuses on the study of the release rate in a family of modified silica mesoporous supports. A collection of solids containing ethyl, butyl, hexyl, octyl, decyl, octadecyl, docosyl, and triacontyl groups anchored on the pore outlets of mesoporous MCM-41 has been prepared and characterized. Controlled release from pore voids has been studied through the delivery of the dye complex tris(2,2¿-bipyridyl)ruthenium(II). Delivery rates were found to be dependent on the alkyl chain length anchored on the pore outlets of the mesoporous scaffolding. Moreover, release rates follow a Higuchi diffusion model, and Higuchi constants for the different hybrid solids have been calculated. A decr…

Models MolecularTrisINGENIERIA DE LA CONSTRUCCIONSurface Propertieschemistry.chemical_elementMolecular Dynamics SimulationMolecular dynamicschemistry.chemical_compoundQUIMICA ORGANICAOrganometallic CompoundsElectrochemistryOrganic chemistryGeneral Materials ScienceParticle SizePorositySpectroscopyAlkylchemistry.chemical_classificationQUIMICA INORGANICASurfaces and InterfacesSilicon DioxideCondensed Matter PhysicsControlled releaseRutheniumChemical engineeringchemistryParticle sizeMesoporous materialPorosity
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Efficient virtual screening using multiple protein conformations described as negative images of the ligand-binding site.

2010

The protein structure-based virtual screening is typically accomplished using a molecular docking procedure. However, docking is a fairly slow process that is limited by the available scoring functions that cannot reliably distinguish between active and inactive ligands. In contrast, the ligand-based screening methods that are based on shape similarity identify the active ligands with high accuracy. Here, we show that the usage of negative images of the ligand-binding site, together with shape comparison tools, which are typically used in ligand-based virtual screening, improve the discrimination of active molecules from inactives. In contrast to ligand-based shape comparison, the negative …

Models MolecularVirtual screeningBinding SitesChemistryProtein ConformationGeneral Chemical EngineeringDrug Evaluation PreclinicalProteinsHydrogen BondingGeneral ChemistryComputational biologyLibrary and Information SciencesLigandsComputer Science ApplicationsUser-Computer InterfaceProtein structureBiochemistryROC CurveDocking (molecular)Computer GraphicsBinding siteDatabases ProteinSoftwareProtein BindingJournal of chemical information and modeling
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Protein knot server: detection of knots in protein structures

2007

KNOTS (http://knots.mit.edu) is a web server that detects knots in protein structures. Several protein structures have been reported to contain intricate knots. The physiological role of knots and their effect on folding and evolution is an area of active research. The user submits a PDB id or uploads a 3D protein structure in PDB or mmCIF format. The current implementation of the server uses the Alexander polynomial to detect knots. The results of the analysis that are presented to the user are the location of the knot in the structure, the type of the knot and an interactive visualization of the knot. The results can also be downloaded and viewed offline. The server also maintains a regul…

Models MolecularWeb serverProtein FoldingTheoretical computer scienceProtein ConformationProtein Data Bank (RCSB PDB)MathematicsofComputing_NUMERICALANALYSISAlexander polynomialBiologyBioinformaticscomputer.software_genreUploadUser-Computer InterfaceKnot (unit)Protein structureTheoryofComputation_ANALYSISOFALGORITHMSANDPROBLEMCOMPLEXITYComputingMethodologies_SYMBOLICANDALGEBRAICMANIPULATIONGeneticsComputer SimulationSurgical knotsDatabases ProteinInteractive visualizationComputingMethodologies_COMPUTERGRAPHICSInternetQuantitative Biology::BiomoleculesModels StatisticalComputational BiologyProteinsArticlesHaemophilus influenzaeMathematics::Geometric TopologycomputerAlgorithmsSoftwareMathematicsofComputing_DISCRETEMATHEMATICS
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Dynamical Properties of Self-Assembled Surfactant-Based Mixtures: Triggering of One-Dimensional Anomalous Diffusion in Bis(2-ethylhexyl)phosphoric Ac…

2013

The dynamic features of bis(2-ethylhexyl)phosphoric acid (HDEHP)/n-octylamine (NOA) mixtures have been investigated as a function of the NOA mole fraction and temperature by (1)H NMR spectroscopy and rheometry. All data consistently suggest a composition-induced glass-forming behavior. The microscopic factors responsible for this behavior have been highlighted and have been explained in terms of driving forces given by HDEHP-to-NOA proton transfer, the tendency of the resulting species to establish H bonds and to spatially segregate the alkyl chains. The study sheds light on the molecular mechanism responsible for the peculiar behavior of transport properties in such systems and furnishes b…

Models Molecularsurfactant mixtures self-assembly dynamical propertiesProtonAnomalous diffusionMole fractionSelf assembledDiffusionSurface-Active Agentschemistry.chemical_compoundPulmonary surfactantElectrochemistryOrganic chemistryGeneral Materials ScienceAminesPhosphoric acidSpectroscopyAlkylSettore CHIM/02 - Chimica Fisicachemistry.chemical_classificationMolecular StructureRheometryChemistrySurfaces and InterfacesCondensed Matter PhysicsOrganophosphatesThermodynamicsPhysical chemistryRheologyLangmuir
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Enhancing dynamic graphical analysis with the Lisp-Stat language and the ViSta statistical program

2005

Presented is a sample of computerized methods aimed at multidimensional scaling and psychometric item analysis that offer a dynamic graphical interface to execute analyses and help visualize the results. These methods show how the Lisp-Stat programming language and the ViSta statistical program can be jointly applied to develop powerful computer applications that enhance dynamic graphical analysis methods. The feasibility of this combined strategy relies on two main features: (1) The programming architecture of ViSta enables users to add new statistical methods as plug-ins, which are integrated into the program environment and can make use of all the functions already available in ViSta (e.…

Models StatisticalComputer programbusiness.industryComputer scienceProgramming languageComputer ApplicationsData manipulation languageExperimental and Cognitive PsychologySample (statistics)computer.software_genreSet (abstract data type)Arts and Humanities (miscellaneous)Computer GraphicsDevelopmental and Educational PsychologyHumansPsychology (miscellaneous)LispGraphicsbusinesscomputerGeneral PsychologyLanguageGraphical user interfacecomputer.programming_languageBehavior Research Methods
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Quasi‐digital front‐ends for current measurement in integrated circuits with giant magnetoresistance technology

2014

In this study, the authors report on two different electronic interfaces for low-power integrated circuits electric current monitoring through current-to-frequency (I-f) conversion schemes. This proposal displays the intrinsic advantages of the quasi-digital systems regarding direct interfacing and self-calibrating capabilities. In addition, as current-sensing devices, they have made use of the giant magnetoresistance (GMR) technology because of its high sensitivity and compatibility with standard complementary metal oxide semiconductor processes. Single elements and Wheatstone bridges based on spin-valves and magnetic tunnel junctions have been considered. In this sense, schematic-level si…

ModulationResistive sensorsEngineeringWheatstone bridgebusiness.industryElectrical engineeringControl and Systems Engineering; Electrical and Electronic EngineeringIntegrated circuitsGiant magnetoresistance:Enginyeria electrònica::Microelectrònica::Circuits integrats [Àrees temàtiques de la UPC]Integrated circuitInterfacelaw.inventionPrinted circuit boardCMOSControl and Systems EngineeringlawInterfacingLow-power electronicsLow-powerCircuits integratsElectrical and Electronic EngineeringElectric currentbusinessIET Circuits, Devices & Systems
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Demixing of Mixed Micelles. Thermodynamics of Sodium Perfluorooctanoate−Sodium Dodecanoate Mixtures in Water

1997

Conductivity, density, heat capacity, enthalpy of dilution, and osmotic coefficient measurements of water−sodium perfluorooctanoate (NaPFO)−sodium dodecanoate systems were carried out as functions of the surfactants' total molality (mt) at different mole fractions (XNaPFO). From conductivity data, the critical micelle concentration (cmc) and the degree of ionization (β) of the micelles were derived. The cmc's of the micelles are higher than those of the pure surfactants while β depends linearly on XNaPFO. At a given mole fraction, the apparent molar volume (VΦ) and heat capacity (CΦ) of the mixture increases and decreases monotonically with mt, respectively. From data in the premicellar reg…

MolalityChemistryThermodynamicsPartial molar propertySurfaces and InterfacesCondensed Matter PhysicsMole fractionHeat capacityMicelleMolar volumeCritical micelle concentrationElectrochemistryGeneral Materials ScienceOsmotic coefficientSpectroscopyLangmuir
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Molecular Association of a Nonionic and an Ionic-Induced Surfactant:  Cryptand (221D) NaCl in Water

2003

The cryptand 5-decyl-4,7,13,16,21-pentaoxa-1,10-diazabicyclo-[8.8.5] tricosane [221D] strongly resembles a surfactant in its characteristics:  it contains a hydrophilic headgroup, the cryptand unit, and a hydrophobic unit, the decyl chain. It is insoluble in water, but in the presence of an appropriate amount of NaCl, as a consequence of the complex formation between 221D and Na+, it becomes soluble and forms aggregates. The aggregates, depending on the NaCl-221D molar ratio, can be considered as mixed ionic nonionic micelles or ionic micelles. The evolution of the aggregate dimensions and their shape has already been studied at two NaCl-221D molar ratios as a function of the 221D concentra…

MolarAggregation numberChemistryComplex formationCryptandInorganic chemistryIonic bondingSurfaces and InterfacesNeutron scatteringCondensed Matter PhysicsMicellePulmonary surfactantElectrochemistryGeneral Materials ScienceSpectroscopyLangmuir
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