Search results for "IOS"

showing 10 items of 8115 documents

Late Cretaceous-Early Eocene origin of yams (Dioscorea, Dioscoreaceae) in the Laurasian Palaearctic and their subsequent Oligocene-Miocene diversific…

2015

Aim: Dioscorea (Dioscoreaceae) is a predominantly pantropical genus (< 600 species) that includes the third most important tropical tuber crop and species of pharmacological value. Fossil records from both the Northern and Southern Hemispheres were used to test hypotheses about the origin of the genus Dioscorea, and to examine potential macroevolutionary processes that led to its current distribution. Location: Pantropical distribution. Methods: Divergence times were estimated using the most comprehensive phylogeny of the group published to date based on plastid sequences and fossil calibrations, applying a relaxed-clock model approach. Ancestral areas and range shifts were reconstructed us…

0106 biological sciencesRange (biology)Thulean – Beringian land bridgesBiogeographyDispersal-extinction-cladogenesis modelPantropicalBiologySoutheast asianN-S American Long-Distance Dispersal010603 evolutionary biology01 natural sciencesPalaearctic – Nearctic colonizationPaleontologyLaurasian originEcology Evolution Behavior and SystematicsEcologyEcologyLand bridgePantropical distributionFossil constrainsWestern Palaearcticbiology.organism_classificationYamsPhylogenetic datingBiogeographyBiological dispersalDioscorea010606 plant biology & botany
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Combined phosphate and nitrogen limitation generates a nutrient stress transcriptome favorable for arbuscular mycorrhizal symbiosis in M edicago trun…

2013

International audience; Arbuscular mycorrhizal (AM) symbiosis is stimulated by phosphorus (P) limitation and contributes to P and nitrogen (N) acquisition. However, the effects of combined P and N limitation on AM formation are largely unknown. Medicago truncatula plants were cultivated in the presence or absence of Rhizophagus irregularis (formerly Glomus intraradices) in P-limited (LP), N-limited (LN) or combined P- and N-limited (LPN) conditions, and compared with plants grown in sufficient P and N. The highest AM formation was observed in LPN, linked to systemic signaling by the plant nutrient status. Plant free phosphate concentrations were higher in LPN than in LP, as a result of cros…

0106 biological sciencesRhizophagus irregularisNitrogenPhysiologyPlant SciencePlant Roots01 natural sciencesPhosphatesPhosphorus metabolismTranscriptome03 medical and health scienceschemistry.chemical_compoundNutrientSymbiosisGene Expression Regulation PlantStress PhysiologicalMycorrhizaeMedicago truncatulaBotanyPlant defense against herbivory[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyPhosphate Transport ProteinsGlomeromycotaSymbiosisPlant Proteins030304 developmental biology2. Zero hunger0303 health sciencesbiologyTerpenesfungifood and beveragesPhosphorusPhosphatebiology.organism_classificationMedicago truncatulaErythritolchemistrySugar PhosphatesTranscriptomeSignal Transduction010606 plant biology & botanyNew Phytologist
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Transcriptional responses of Medicago truncatula upon sulfur deficiency stress and arbuscular mycorrhizal symbiosis

2014

International audience; Sulfur plays an essential role in plants' growth and development and in their response to various abiotic and biotic stresses despite its leachability and its very low abundance in the only form that plant roots can uptake (sulfate). It is part of amino acids, glutathione (GSH), thiols of proteins and peptides, membrane sulfolipids, cell walls and secondary products, so reduced availability can drastically alter plant growth and development. The nutritional benefits of symbiotic interactions can help the plant in case of S deficiency. In particular the arbuscular mycorrhizal (AM) interaction improves N, P and S plant nutrition, but the mechanisms behind these exchang…

0106 biological sciencesRhizophagus irregularisS deficiencyTranscription Genetic[SDV]Life Sciences [q-bio]FungusPlant Sciencelcsh:Plant culture01 natural sciencesAM interactionrhizophagus irregularissulfur deficiencyTranscriptomeCell wall03 medical and health sciencesBotanymedicago truncatula;transcriptome;S deficiency;AM interaction;rhizophagus irregularis[SDV.BV]Life Sciences [q-bio]/Vegetal Biologylcsh:SB1-1110Original Research ArticleGene030304 developmental biology2. Zero hungerAbiotic component0303 health sciencescarencebiologyarbuscular mycorrhizafungifood and beveragesmedicago truncatulabiology.organism_classificationMedicago truncatulaArbuscular Mycorrhizal Symbiosis[SDE]Environmental SciencesPlant nutritionnutrition soufréetranscriptome010606 plant biology & botany
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Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis

2013

International audience; The mutualistic symbiosis involving Glomeromycota, a distinctive phylum of early diverging Fungi, is widely hypothesized to have promoted the evolution of land plants during the middle Paleozoic. These arbuscular mycorrhizal fungi (AMF) perform vital functions in the phosphorus cycle that are fundamental to sustainable crop plant productivity. The unusual biological features of AMF have long fascinated evolutionary biologists. The coenocytic hyphae host a community of hundreds of nuclei and reproduce clonally through large multinucleated spores. It has been suggested that the AMF maintain a stable assemblage of several different genomes during the life cycle, but thi…

0106 biological sciencesRhizophagus irregularismutualism[SDV]Life Sciences [q-bio]Molecular Sequence DataFungus01 natural sciencesGenomecarbohydrate-active enzymes; effector; fungal evolution; glomales; mutualismGlomeromycotaEvolution Molecular03 medical and health sciencesSymbiosisMycorrhizaeBotanyGlomeromycotaSymbiosisGenefungal evolution030304 developmental biologyGenomic organizationMucoromycotina0303 health sciencesMultidisciplinarybiology[ SDV ] Life Sciences [q-bio]Base SequencefungiglomalesSequence Analysis DNA15. Life on landPlantsBiological Sciencesbiology.organism_classificationeffectorEvolutionary biologycarbohydrate-active enzymesGenome Fungal010606 plant biology & botany
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Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula

2004

To construct macro- and microarray tools suitable for expression profiling in root endosymbioses of the model legume Medicago truncatula, we PCR-amplified a total of 6048 cDNA probes representing genes expressed in uninfected roots, mycorrhizal roots and young root nodules [Nucleic Acids Res. 30 (2002) 5579]. Including additional probes for either tissue-specific or constitutively expressed control genes, 5651 successfully amplified gene-specific probes were used to grid macro- and to spot microarrays designated Mt6k-RIT (M. truncatula 6k root interaction transcriptome). Subsequent to a technical validation of microarray printing, we performed two pilot expression profiling experiments usin…

0106 biological sciencesRoot nodule[SDV]Life Sciences [q-bio]Plant Roots01 natural sciencesApplied Microbiology and BiotechnologyTranscriptomeADNCGene Expression Regulation PlantGene Expression Regulation FungalMycorrhizaeMedicagoPCR-basedComputingMilieux_MISCELLANEOUSOligonucleotide Array Sequence AnalysisPlant ProteinsExpressed Sequence Tags2. Zero hunger0303 health sciencesnodulin genesroot nodule symbiosisarbuscular mycorrhizafood and beveragesEquipment DesignGeneral MedicineMedicago truncatulaArbuscular mycorrhiza[SDV] Life Sciences [q-bio]expression profilingDNA microarrayBiotechnologyBioengineeringComputational biologyBiologySensitivity and Specificity03 medical and health sciencesComplementary DNABotanySymbiosisLeghemoglobin030304 developmental biologyGene Expression ProfilingfungiReproducibility of Resultsbiology.organism_classificationEquipment Failure AnalysisGene expression profilingphosphate transportercDNA array010606 plant biology & botany
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Acclimatised rumen culture for raw microalgae conversion into biogas: Linking microbial community structure and operational parameters in anaerobic m…

2019

[EN] Ruminal fluid was inoculated in an Anaerobic Membrane Reactor (AnMBR) to produce biogas from raw Scenedesmus. This work explores the microbial ecology of the system during stable operation at different solids retention times (SRT). The 16S rRNA amplicon analysis revealed that the acclimatised community was mainly composed of Anaerolineaceae, Spirochaetaceae, Lentimicrobiaceae and Cloacimonetes fermentative and hydrolytic members. During the highest biodegradability achieved in the AnMBR (62%) the dominant microorganisms were Fervidobacterium and Methanosaeta. Different microbial community clusters were observed at different SRT conditions. Interestingly, syntrophic bacteria Gelria and …

0106 biological sciencesRumenEnvironmental EngineeringMicroorganismBioengineering010501 environmental sciencesWaste Disposal Fluid01 natural sciencesMethanosaetaBioreactorsBiogasMicrobial ecologyBioenergyRNA Ribosomal 16S010608 biotechnologyMicroalgaeBioreactorAnimalsAnaerobiosisWaste Management and DisposalTECNOLOGIA DEL MEDIO AMBIENTE0105 earth and related environmental sciencesbiologyAnaerobic membrane bioreactor (AnMBR)Renewable Energy Sustainability and the EnvironmentChemistryMicrobiotaGeneral MedicineBiogasMicroalgaeBiodegradationbiology.organism_classificationPulp and paper industryMicrobial population biologyBiofuels16S rRNA geneMethaneBioresource Technology
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Implications of the EFSA Scientific Opinion on Site Directed Nucleases 1 and 2 for Risk Assessment of Genome-Edited Plants in the EU

2021

Genome editing is a set of techniques for introducing targeted changes in genomes. It may be achieved by enzymes collectively called site-directed nucleases (SDN). Site-specificity of SDNs is provided either by the DNA binding domain of the protein molecule itself or by RNA molecule(s) that direct SDN to a specific site in the genome. In contrast to transgenesis resulting in the insertion of exogenous DNA, genome editing only affects specific endogenous sequences. Therefore, multiple jurisdictions around the world have exempted certain types of genome-edited organisms from national biosafety regulations completely, or on a case-by-case basis. In the EU, however, the ruling of the Court of J…

0106 biological sciencesSDN-2SDN-1Mutagenesis (molecular biology technique)Computational biology01 natural sciencesGenomegenome-edited organismlcsh:Agriculture03 medical and health sciencesBiosafetyGenome editingsite-directed nucleasegenetically modified organismJustice (ethics)EFSA opinion030304 developmental biology0303 health sciencesScope (project management)business.industrylcsh:SFood safetyDirectiveBusinessAgronomy and Crop Science010606 plant biology & botanyAgronomy
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Tackling invasive alien species in Europe II: threats and opportunities until 2020

2017

2nd Freshwater Invasives - Networking for Strategy II (FINS-II) Conference -- JUL 11-14, 2016 -- Zagreb, CROATIA Skora, Michal Edward/0000-0002-9121-1318; Groom, Quentin/0000-0002-0596-5376; Lukas, Juliane/0000-0003-3336-847X; Skora, Michal/0000-0002-9121-1318; Piria, Marina/0000-0001-6324-9282; Smith, Emily/0000-0003-2767-9933; Simonovic, Predrag/0000-0002-4819-4962; Pastorino, Paolo/0000-0002-0585-1168; Koutsikos, Nicholas/0000-0003-0680-4504; Vilizzi, Lorenzo/0000-0001-8103-885X; Dobrzycka-Krahel, Aldona/0000-0002-4252-895X; Tarkan, Ali Serhan/0000-0001-8628-0514 WOS: 000412582000002 Invasive alien species (IAS) are a significant and growing problem worldwide. In Europe, some aspects of …

0106 biological sciencesScoring systemStandardizationympäristöympäristöoikeusData managementBiosecurityympäristönhoitoECOSYSTEM SERVICES01 natural sciencesFRESH-WATER FISHenvironmental managementCITIZEN SCIENCEnon-native species ; legislation ; policy ; environmental management ; sequential rank voting ; scoring systemCitizen sciencesequential rank votingSDG 15 - Life on LandlainsäädäntöWarning systemCHALLENGESEcologyEnvironmental resource managementStakeholderPublic relationsnon-native speciesPolicyComputingMethodologies_DOCUMENTANDTEXTPROCESSING/dk/atira/pure/subjectarea/asjc/1100/1105non-native species; legislation; policy; environmental management; sequential rank voting; scoring systempolicyIMPACTSEnvironmental managementSequential rank votingCONSERVATIONLegislationNon-native species/dk/atira/pure/subjectarea/asjc/2300/2308LegislationBiologyManagement Monitoring Policy and Lawlegislation010603 evolutionary biology/dk/atira/pure/sustainabledevelopmentgoals/life_on_landEcology and EnvironmentGeneralLiterature_MISCELLANEOUSMANAGEMENTKNOWLEDGEnon-native specie14. Life underwatervieraslajit/dk/atira/pure/subjectarea/asjc/2300/2303ympäristöjohtaminenEcology Evolution Behavior and Systematicsbusiness.industry010604 marine biology & hydrobiologyscoring system13. Climate actionPrivate propertyta1181BIODIVERSITYbusiness
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Female mate choice in convict cichlids is transitive and consistent with a self-referent directional preference

2013

10 pages; International audience; INTRODUCTION: One of the most important decisions that an animal has to make in its life is choosing a mate. Although most studies in sexual selection assume that mate choice is rational, this assumption has not been tested seriously. A crucial component of rationality is that animals exhibit transitive choices: if an individual prefers option A over B, and B over C, then it also prefers A over C. RESULTS: We assessed transitivity in mate choice: 40 female convict cichlids had to make a series of binary choices between males of varying size. Ninety percent of females showed transitive choices. The mean preference index was significantly higher when a female…

0106 biological sciencesSelf-referent directional preferenceMate choiceContext (language use)Amatitlania nigrofasciataRationality010603 evolutionary biology01 natural sciencesAssortative mating[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/Symbiosis0501 psychology and cognitive sciences050102 behavioral science & comparative psychologyConvict cichlidEcology Evolution Behavior and SystematicsTransitive relationTransitivity[ SDE.BE ] Environmental Sciences/Biodiversity and EcologybiologyResearch05 social sciencesAssortative matingDecision rulebiology.organism_classificationPreferenceMate choiceSexual selectionAnimal Science and Zoology[SDE.BE]Environmental Sciences/Biodiversity and EcologySocial psychology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisFrontiers in Zoology
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Parasite-induced behavioral change: mechanisms.

2010

Animal behavior and parasitism are more tightly linked than commonly thought. One of the most astonishing phenomena in host–parasite antagonistic interactions is ‘host manipulation,’ that is, the ability of a parasite to alter the behavior of its host in ways that appear to increase parasite fitness at the expense of host fitness. The mechanisms by which a parasite hijacks the behavior of its host have been explored using ethopharmacological and immunocytochemical approaches or carrying out a large-scale proteomic study on manipulated host’s brain. These few mechanistic studies have confirmed both the complexity of host manipulation by parasites and the importance of understanding the molec…

0106 biological sciencesSerotonin[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyProteomeParasitismBiologyBioinformatics010603 evolutionary biology01 natural sciencesRodentsTranscriptome03 medical and health sciences[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisParasite hosting[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyAnimal behavior030304 developmental biology0303 health sciences[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyHost (biology)Phenotype3. Good healthCrustaceansNeuromodulatorInsectsParasiteEvolutionary biologyProteome[SDE.BE]Environmental Sciences/Biodiversity and EcologyEthopharmacologyTranscriptome[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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