Search results for "ISLAND"
showing 10 items of 761 documents
THE MEDITERRANEAN AS SOURCE OF ORNAMENTAL
2013
Cultivation of plants for ornamental purposes throughout the Mediterranean dates back to deep antiquity. In fact Egyptian, Greek, Roman and other previous myths are pervaded with correlations among humans, gods and plants either useful or ornamental – whose names such as hyacinth, narcissus, and many others that are still common. In that period almost all of the ornamental flora was native to the Mediterranean and next countries, having been the flow from other territories irrelevant up to the Renaissance. From XVI century on, the whole Mediterranean ornamental heritage was gradually spread throughout the new discovered territories, and from there a huge number of plants was introduced to M…
Changes in the bacterial community of Canary island date palm tissues attacked by Rhynchophorus ferrugineus (Coleoptera: Curculionidae).
2009
The red palm weevil (RPW), Rhynchophorus ferrugineus is a trunk tissue borer that has recently become the major pest of palms in the Mediterranean Basin. In Sicily the red palm weevil is strongly associated with the Canary island date palm, Phoenix canariensis Hortorum ex Chabaud, an ornamental palm with high economic value. RPW larvae consumes the trunk tender soft tissues, making galleries that present a chewed appearance with a characteristic fermented odour. Several aspects of the RPW’s biology still need to be investigated such as its gut bacterial community, and the agents of fermentation processes that occur in the galleries made by the larvae. The aim of this work was to analyse the…
Why do results conflict regarding the prognostic value of the methylation status in colon cancers? The role of the preservation method.
2012
Abstract Background In colorectal carcinoma, extensive gene promoter hypermethylation is called the CpG island methylator phenotype (CIMP). Explaining why studies on CIMP and survival yield conflicting results is essential. Most experiments to measure DNA methylation rely on the sodium bisulfite conversion of unmethylated cytosines into uracils. No study has evaluated the performance of bisulfite conversion and methylation levels from matched cryo-preserved and Formalin-Fixed Paraffin Embedded (FFPE) samples using pyrosequencing. Methods Couples of matched cryo-preserved and FFPE samples from 40 colon adenocarcinomas were analyzed. Rates of bisulfite conversion and levels of methylation of …
Whole-epigenome analysis in multiple myeloma reveals DNA hypermethylation of B cell-specific enhancers
2015
Abstract Analyzing the DNA methylome of multiple myeloma (MM), a plasma cell neoplasm, by whole-genome bisulfite sequencing and high-density arrays, we observed regional DNA hypermethylation embedded in extensive global hypomethylation. In contrast to the widely reported DNA hypermethylation of promoter-associated CpG islands (CGIs) in cancer, hypermethylated sites in MM as compared to normal plasma cells were located outside CpG islands and were unexpectedly associated with intronic enhancer regions active in normal B cells. Both RNA-seq and in vitro reporter assays indicated that enhancer hypermethylation is globally associated with downregulation of its host genes. ChIP-seq and DNAseI-se…
Epidemiological, clinical and molecular characterization of Lynch‐like syndrome: A population‐based study
2019
Colorectal carcinomas that are mismatch repair (MMR)‐deficient in the absence of MLH1 promoter methylation or germline mutations represent Lynch‐like syndrome (LLS). Double somatic events inactivating MMR genes are involved in the etiology of LLS tumors. Our purpose was to define the clinical and broader molecular hallmarks of LLS tumors and the population incidence of LLS, which remain poorly characterized. We investigated 762 consecutive colorectal carcinomas operated in Central Finland in 2000–2010. LLS cases were identified by a stepwise protocol based on MMR protein expression, MLH1 methylation and MMR gene mutation status. LLS tumors were profiled for CpG Island Methylator Phenotype (…
DNA methylation profiling to explore colorectal tumor differences according to menopausal hormone therapy use in women
2019
Aim: Use of menopausal hormone therapy (MHT) has been associated with a reduced risk for colorectal cancer, but mechanisms underlying this relationship are not well understood. In the colon, MHT appears to act through estrogen receptor β (ERβ) which may influence DNA methylation by binding to DNA. Using genome-wide methylation profiling data, we aimed to identify genes that may be differentially methylated according to MHT use. Materials & methods: DNA methylation was measured using Illumina HumanMethylation450k arrays in two independent tumor sample sets of colorectal cancer patients. Differential methylation was determined using R/limma. Results: In the discovery analysis, two CpG si…
Insights into Genetic Diversity, Runs of Homozygosity and Heterozygosity-Rich Regions in Maremmana Semi-Feral Cattle Using Pedigree and Genomic Data
2020
Semi-feral local livestock populations, like Maremmana cattle, are the object of renewed interest for the conservation of biological diversity and the preservation and exploitation of unique and potentially relevant genetic material. The aim of this study was to estimate genetic diversity parameters in semi-feral Maremmana cattle using both pedigree- and genomic-based approaches (FIS and FROH), and to detect regions of homozygosity (ROH) and heterozygosity (ROHet) in the genome. The average heterozygosity estimates were in the range reported for other cattle breeds (HE=0.261, HO=0.274). Pedigree-based average inbreeding (F) was estimated at 4.9%. The correlation was low between F and genomi…
FOXP2 gene and language impairment in schizophrenia: association and epigenetic studies
2010
Abstract Background Schizophrenia is considered a language related human specific disease. Previous studies have reported evidence of positive selection for schizophrenia-associated genes specific to the human lineage. FOXP2 shows two important features as a convincing candidate gene for schizophrenia vulnerability: FOXP2 is the first gene related to a language disorder, and it has been subject to positive selection in the human lineage. Methods Twenty-seven SNPs of FOXP2 were genotyped in a cohort of 293 patients with schizophrenia and 340 controls. We analyzed in particular the association with the poverty of speech and the intensity of auditory hallucinations. Potential expansion of thre…
Surface to boundary layer coupling in the urban area of Lisbon comparing different urban canopy models in WRF
2019
Abstract This work presents a sensitivity study to evaluate different Urban Canopy Models (UCM) existing within the Weather Research and Forecasting Model (WRF) in the urban area of Lisbon, Portugal. Several hind-cast simulations were carried out for a selected period in July 2010, in which synoptic conditions favoured urban heat island formation. We aim to gain knowledge on the feedback of modified urban canopy representation in WRF on local scale meteorology and the boundary-layer dynamics over the urban area, by comparing a single layer urban canopy model (SLUCM) and a more sophisticated multi-layer building effect parametrisation (BEP). We find significant differences in the characteris…
Relationship between recruitment and mother plant vitality in the alien species Acacia cyclops A. Cunn. ex G. Don
2014
Acacia cyclops is a widespread invader in Mediterranean-climate regions. However, although its naturalization in the Mediterranean Basin dates back only a few years ago, and the invasion process has not been studied hitherto. We investigated seedlings recruitment strategy adopted by A. cyclops in a small island (Lampedusa, Italy) where its natural regeneration was strictly confined under mother plants canopy. Healthy plants (DCP), plants at incipient senescence (SCP) and dead plants (DP) were distinguished according to vitality and canopy status. Living plants were also characterized in relation to leaf C and N isotope composition. Regeneration pattern (seedlings and saplings abundance) was…