Search results for "ITIES"

showing 10 items of 43372 documents

Towards development of a statistical framework to evaluate myotonic dystrophy type 1 mRNA biomarkers in the context of a clinical trial

2020

AbstractMyotonic dystrophy type 1 (DM1) is a rare genetic disorder, characterised by muscular dystrophy, myotonia, and other symptoms. DM1 is caused by the expansion of a CTG repeat in the 3’-untranslated region of DMPK. Longer CTG expansions are associated with greater symptom severity and earlier age at onset. The primary mechanism of pathogenesis is thought to be mediated by a gain of function of the CUG-containing RNA, that leads to trans-dysregulation of RNA metabolism of many other genes. Specifically, the alternative splicing (AS) and alternative polyadenylation (APA) of many genes is known to be disrupted. In the context of clinical trials of emerging DM1 treatments, it is important…

0301 basic medicineMicroarrayPhysiologyMicroarraysBioinformaticsBiochemistryMachine Learning0302 clinical medicineMathematical and Statistical TechniquesMedicine and Health SciencesMyotonic DystrophyMuscular dystrophyOligonucleotide Array Sequence AnalysisClinical Trials as TopicMultidisciplinaryMusclesQStatisticsRGenetic disorderMuscle AnalysisBody FluidsNucleic acidsBloodBioassays and Physiological AnalysisTreatment OutcomeGenetic DiseasesPhysical SciencesMedicineRegression AnalysisAnatomyDatabases Nucleic AcidResearch Articlemusculoskeletal diseasesGenetic Markerscongenital hereditary and neonatal diseases and abnormalitiesScienceContext (language use)Linear Regression AnalysisBiostatisticsResearch and Analysis MethodsPolyadenylationMyotonic dystrophyMyotonin-Protein Kinase03 medical and health sciencesmedicineGeneticsHumansRNA MessengerStatistical MethodsLeast-Squares AnalysisGeneClinical GeneticsModels Geneticbusiness.industryAlternative splicingBiology and Life Sciencesmedicine.diseaseMyotoniaAlternative Splicing030104 developmental biologyRNA processingRNAGene expressionbusinessTrinucleotide repeat expansionTrinucleotide Repeat Expansion030217 neurology & neurosurgeryBiomarkersMathematicsForecastingPLoS ONE
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High microbial diversity promotes soil ecosystem functioning

2018

ABSTRACT In soil, the link between microbial diversity and carbon transformations is challenged by the concept of functional redundancy. Here, we hypothesized that functional redundancy may decrease with increasing carbon source recalcitrance and that coupling of diversity with C cycling may change accordingly. We manipulated microbial diversity to examine how diversity decrease affects the decomposition of easily degradable (i.e., allochthonous plant residues) versus recalcitrant (i.e., autochthonous organic matter) C sources. We found that a decrease in microbial diversity (i) affected the decomposition of both autochthonous and allochthonous carbon sources, thereby reducing global CO 2 e…

0301 basic medicineMicrobial diversitySoil biodiversity[SDV]Life Sciences [q-bio]carbon mineralizationApplied Microbiology and BiotechnologyEcosystem servicesNutrient[ SDV.MP ] Life Sciences [q-bio]/Microbiology and ParasitologyEnvironmental MicrobiologySoil Microbiology2. Zero hungerchemistry.chemical_classificationEcologyEcologyredundancyMicrobiota04 agricultural and veterinary sciencesrespiratory systemfunctional redundancy[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyBiotechnologypriming effect[ SDV.SA.SDS ] Life Sciences [q-bio]/Agricultural sciences/Soil studyContext (language use)[SDV.BID]Life Sciences [q-bio]/Biodiversity[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studyCarbon cycle03 medical and health sciencessoil organic matterOrganic matterEcosystem14. Life underwaterEcosystem[ SDV.BID ] Life Sciences [q-bio]/BiodiversityBacteria[ SDV ] Life Sciences [q-bio]Soil organic matterFungi15. Life on landCarbonfunctional030104 developmental biologychemistry13. Climate actionmicrobial diversity040103 agronomy & agriculture0401 agriculture forestry and fisheriesEnvironmental sciencehuman activitiesFood Science
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Neisseria gonorrhoeae antimicrobial resistance in Spain: a prospective multicentre study.

2021

Abstract Objectives Gonococcal infection is one of the most reported sexually transmitted infections and antimicrobial resistance in Neisseria gonorrhoeae (NG) is challenging for the treatment of this infection. This observational study aimed to describe antimicrobial resistance of NG and epidemiological data from patients with gonococcal infection in eight regions of Spain, for updating the local therapeutic guidelines. Methods MICs of penicillin, cefixime, ceftriaxone, azithromycin, ciprofloxacin, fosfomycin and gentamicin were determined by Etest for all NG isolates recovered from 1 April 2018 to 30 September 2019 from 10 hospitals in Spain. Resistance determinants were identified using …

0301 basic medicineMicrobiology (medical)Malemedicine.medical_specialty030106 microbiologyMicrobial Sensitivity TestsFosfomycinAzithromycinAzithromycinmedicine.disease_cause03 medical and health sciencesGonorrheaSexual and Gender Minorities0302 clinical medicineAntibiotic resistanceCiprofloxacinInternal medicineDrug Resistance BacterialmedicineHumansPharmacology (medical)030212 general & internal medicineProspective StudiesHomosexuality MaleEtestPharmacologybusiness.industryCeftriaxoneNeisseria gonorrhoeaeAnti-Bacterial AgentsPenicillinCiprofloxacinInfectious DiseasesSpainNeisseria gonorrhoeaebusinessCefiximemedicine.drugThe Journal of antimicrobial chemotherapy
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Plants assemble species specific bacterial communities from common core taxa in three arcto-alpine climate zones

2017

Evidence for the pivotal role of plant-associated bacteria to plant health and productivity has accumulated rapidly in the last years. However, key questions related to what drives plant bacteriomes remain unanswered, among which is the impact of climate zones on plant-associated microbiota. This is particularly true for wild plants in arcto-alpine biomes. Here, we hypothesized that the bacterial communities associated with pioneer plants in these regions have major roles in plant health support, and this is reflected in the formation of climate and host plant specific endophytic communities. We thus compared the bacteriomes associated with the native perennial plants Oxyria digyna and Saxi…

0301 basic medicineMicrobiology (medical)PH030106 microbiologyDIVERSITYBiologySaxifraga oppositifoliaMicrobiologyActinobacteriabiogeographical diversity03 medical and health sciencesarcto-alpine plantBotanyGRADIENTMICROBIAL COMMUNITIESOxyria digynaOriginal Research2. Zero hungerOxyria digynaSaxifraga oppositifoliaPioneer speciesSEQUENCESEcologyfungiAlpine climatefood and beveragesRHIZOSPHERE15. Life on landENDOPHYTIC BACTERIAbiology.organism_classificationcore bacteriomeTUNDRABurkholderialesendophytic bacteria030104 developmental biologySOIL TYPEta1181ProteobacteriaAcidobacteriaBIOGEOGRAPHYFrontiers in Microbiology
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Gastrointestinal parasite burden in 4th-5th c. CE Florence highlighted by microscopy and paleogenetics

2021

The study of ancient parasites, named paleoparasitology, traditionally focused on microscopic eggs disseminated in past environments and archaeological structures by humans and other animals infested by gastrointestinal parasites. Since the development of paleogenetics in the early 1980s, few paleoparasitological studies have been based on the ancient DNA (aDNA) of parasites, although such studies have clearly proven their utility and reliability. In this paper, we describe our integrative approach for the paleoparasitological study of an ancient population from Florence in Italy, dated to the 4th-5th c. CE. The first stage consisted in the study of sediment samples from the pelvic area of …

0301 basic medicineMicrobiology (medical)Paleoparasitology030106 microbiologyPopulationZoologyContext (language use)Microbiology03 medical and health sciencesGeneticsAnimalsHumansTrichuriasisCitiesDicrocoeliumIntestinal Diseases ParasiticeducationMolecular BiologyHistory AncientEcology Evolution Behavior and SystematicsAscariasiseducation.field_of_studybiologyAscarisAscarisDicrocoelium dendriticumPaleogeneticsDicrocoeliasisbiology.organism_classificationTrichuris030104 developmental biologyInfectious DiseasesAncient DNAItalyAscaris lumbricoidesInfection, Genetics and Evolution
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Large genomics datasets shed light on the evolution of the Mycobacterium tuberculosis complex

2019

Review: 5 páginas, 1 figura

0301 basic medicineMicrobiology (medical)TuberculosisVirulence FactorsEvolutionmedia_common.quotation_subject030106 microbiologyVirulenceGenomicsMicrobiologyPopulation genomicsEvolution Molecular03 medical and health sciencesGeneticsmedicineHumansTuberculosisEvolution Genomics Mycobacterium tuberculosis complex Positive selectionMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenymedia_commonbiologyStrain (biology)Genetic VariationMycobacterium tuberculosisGenomicsGlobal diversitymedicine.diseasebiology.organism_classification3. Good healthPositive selection030104 developmental biologyInfectious DiseasesMycobacterium tuberculosis complexEvolutionary biologyHost-Pathogen InteractionsMycobacterium tuberculosis complexhuman activitiesGenome BacterialDiversity (politics)
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The Generalist Inside the Specialist: Gut Bacterial Communities of Two Insect Species Feeding on Toxic Plants Are Dominated by Enterococcus sp.

2016

Some specialist insects feed on plants rich in secondary compounds, which pose a major selective pressure on both the phytophagous and the gut microbiota. However, microbial communities of toxic plant feeders are still poorly characterized. Here, we show the bacterial communities of the gut of two specialized Lepidoptera, Hyles euphorbiae and Brithys crini, which exclusively feed on latex-rich Euphorbia sp. and alkaloid-rich Pancratium maritimum, respectively. A metagenomic analysis based on high-throughput sequencing of the 16S rRNA gene revealed that the gut microbiota of both insects is dominated by the phylum Firmicutes, and especially by the common gut inhabitant Enterococcus sp. Staph…

0301 basic medicineMicrobiology (medical)media_common.quotation_subject030106 microbiologyInsectGut floraGeneralist and specialist speciesMicrobiologyMicrobiologyGut communities03 medical and health sciencesHyles euphorbiaeEnterococcus casseliflavusEnterococcus sp.Original Researchmedia_commonmetagenomicsLarvabiologysecondary metabolitesgut communitiesSecondary metabolitesfungiBiofilmbiology.organism_classificationLepidoptera030104 developmental biology: lepidopteraMetagenomicsBacteriaFrontiers in Microbiology
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A Snapshot on MRSA Epidemiology in a Neonatal Intensive Care Unit Network, Palermo, Italy

2016

Objectives. We performed a one-year prospective surveillance study on MRSA colonization within the five NICUs of the metropolitan area of Palermo, Italy. The purpose of the study was to assess epidemiology of MRSA in NICU from a network perspective. Methods. Transfer of patients between NICUs during 2014 was traced based on the annual hospital discharge records. In the period February 2014 – January 2015, in the NICU B, at the University teaching hospital, nasal swabs from all infants were collected weekly, whereas in the other four NICUs (A, C, D, E) at four week-intervals of time. MRSA isolates were submitted to antibiotic susceptibility testing, SCCmec typing, PCR to detect lukS-PV and l…

0301 basic medicineMicrobiology (medical)medicine.medical_specialtyNeonatal intensive care unithealth care facilities manpower and services030106 microbiologylcsh:QR1-502MRSAMicrobiologylcsh:Microbiology03 medical and health sciencesInternal medicineEpidemiologyMedicineInfection controlnetwork approachOriginal ResearchNICuActive surveillance; Molecular typing; MRSA; Network approach; NICu; Microbiology; Microbiology (medical)business.industryMRSA colonizationactive surveillancemolecular typingSequence typesVariable number tandem repeat030104 developmental biologyMultilocus sequence typingUniversity teachingbusinessFrontiers in Microbiology
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The BioFireFilmArray enables point of care diagnostic in neonatal parechovirus meningitis.

2017

Sir,We read with great interest a report in the present journal on the application of broad-range PCR combined with DNA sequencing for detection of bacteria in cerebrospinal fluid (CSF) [1]. This m...

0301 basic medicineMicrobiology (medical)medicine.medical_specialtyPoint-of-Care Systems030106 microbiologyMEDLINEParechovirusDNA sequencingInfant Newborn Diseases03 medical and health sciencesCerebrospinal fluidMedicineHumansMeningitisIntensive care medicinePicornaviridae InfectionsPoint of carePicornaviridae InfectionsGeneral Immunology and Microbiologybiologybusiness.industryInfant NewbornGeneral Medicinemedicine.diseasebiology.organism_classificationhumanitiesInfectious DiseasesParechovirusbusinessMeningitisInfectious diseases (London, England)
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Influenza vaccination of healthcare workers in Italy: could mandatory vaccination be a solution to protect patients?

2019

Several studies have reported that influenza infections in healthcare workers (HCWs) can lead to nosocomial outbreaks. HCWs can potentially be infected with influenza every year, and may continue to work, encouraging the spread of the virus. Different strategies, such as informative interventions on influenza and influenza vaccination, ‘onsite’ vaccination weeks, communicative strategies through dedicated web and social media pages, and mandatory informed dissent form, were organized for HCWs working at the University Hospital of Palermo, during previous influenza seasons. However, the increased vaccination rates observed among HCWs still remain far from the 75% recommended by Public Healt…

0301 basic medicineMicrobiology (medical)medicine.medical_specialtyVaccination CoverageAttitude of Health Personnelhealth care facilities manpower and servicesHealth Personneleducation030106 microbiologyPsychological interventionMandatory ProgramsSettore MED/42 - Igiene Generale E ApplicataMicrobiologyInfectious Disease Transmission Professional-to-PatientHospitals University03 medical and health sciencesHealth careInfluenza HumanmedicineHumansNosocomial outbreakbusiness.industryPublic healthVaccinationvirus diseasesUniversity hospitalMandatory vaccinationcommunication strategies healthcare workers influenza disease perception influenza vaccination mandatory vaccinationVaccination030104 developmental biologyItalyInfluenza VaccinesFamily medicinebusinessFuture microbiology
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