Search results for "Image segmentation"
showing 10 items of 234 documents
Architecture-Driven Level Set Optimization: From Clustering to Sub-pixel Image Segmentation
2016
Thanks to their effectiveness, active contour models (ACMs) are of great interest for computer vision scientists. The level set methods (LSMs) refer to the class of geometric active contours. Comparing with the other ACMs, in addition to subpixel accuracy, it has the intrinsic ability to automatically handle topological changes. Nevertheless, the LSMs are computationally expensive. A solution for their time consumption problem can be hardware acceleration using some massively parallel devices such as graphics processing units (GPUs). But the question is: which accuracy can we reach while still maintaining an adequate algorithm to massively parallel architecture? In this paper, we attempt to…
A local level set method for liver segmentation in functional MR imaging
2011
Functional Magnetic Resonance (fMR) is a medical image technique in which a contrast is injected in the vascular system so that blood diffusion along it can be observed as variations of the signal intensity. The uptake variations of the contrast agent are used in early detection of tumorous tissue. For the diagnostic to be accurate, successive volumes must be correctly registered. For binary registration prior segmentation of the 3D fMR data is required. Here we present a local 3D level-set segmentation method which preserves details and edges, along with its multi-scale version which has the advantage of a great acceleration with respect to the single-scale version. Results of liver segmen…
Comparison of different segmentation approaches without using gold standard. Application to the estimation of the left ventricle ejection fraction fr…
2011
International audience; A statistical method is proposed to compare several estimates of a relevant clinical parameter when no gold standard is available. The method is illustrated by considering the left ventricle ejection fraction derived from cardiac magnetic resonance images and computed using seven approaches with different degrees of automation. The proposed method did not use any a priori regarding with the reliability of each method and its degree of automation. The results showed that the most accurate estimates of the ejection fraction were obtained using manual segmentations, followed by the semiautomatic methods, while the methods with the least user input yielded the least accu…
A supervised learning framework of statistical shape and probability priors for automatic prostate segmentation in ultrasound images
2013
Prostate segmentation aids in prostate volume estimation, multi-modal image registration, and to create patient specific anatomical models for surgical planning and image guided biopsies. However, manual segmentation is time consuming and suffers from inter-and intra-observer variabilities. Low contrast images of trans rectal ultrasound and presence of imaging artifacts like speckle, micro-calcifications, and shadow regions hinder computer aided automatic or semi-automatic prostate segmentation. In this paper, we propose a prostate segmentation approach based on building multiple mean parametric models derived from principal component analysis of shape and posterior probabilities in a multi…
Deep Learning Techniques for Automatic MRI Cardiac Multi-Structures Segmentation and Diagnosis: Is the Problem Solved?
2018
Delineation of the left ventricular cavity, myocardium, and right ventricle from cardiac magnetic resonance images (multi-slice 2-D cine MRI) is a common clinical task to establish diagnosis. The automation of the corresponding tasks has thus been the subject of intense research over the past decades. In this paper, we introduce the “Automatic Cardiac Diagnosis Challenge” dataset (ACDC), the largest publicly available and fully annotated dataset for the purpose of cardiac MRI (CMR) assessment. The dataset contains data from 150 multi-equipments CMRI recordings with reference measurements and classification from two medical experts. The overarching objective of this paper is to measure how f…
Spectral clustering of shape and probability prior models for automatic prostate segmentation.
2013
Imaging artifacts in Transrectal Ultrasound (TRUS) images and inter-patient variations in prostate shape and size challenge computer-aided automatic or semi-automatic segmentation of the prostate. In this paper, we propose to use multiple mean parametric models derived from principal component analysis (PCA) of shape and posterior probability information to segment the prostate. In contrast to traditional statistical models of shape and intensity priors, we use posterior probability of the prostate region determined from random forest classification to build, initialize and propagate our model. Multiple mean models derived from spectral clustering of combined shape and appearance parameters…
Mid-sagittal plane detection for advanced physiological measurements in brain scans
2019
Objective The process of diagnosing many neurodegenerative diseases, such as Parkinson's and progressive supranuclear palsy, involves the study of brain magnetic resonance imaging (MRI) scans in order to identify and locate morphological markers that can highlight the health status of the subject. A fundamental step in the pre-processing and analysis of MRI scans is the identification of the mid-sagittal plane, which corresponds to the mid-brain and allows a coordinate reference system for the whole MRI scan set. Approach To improve the identification of the mid-sagittal plane we have developed an algorithm in Matlab® based on the k-means clustering function. The results have been compared …
Joint Probability of Shape and Image Similarities to Retrieve 2D TRUS-MR Slice Correspondence for Prostate Biopsy
2012
International audience; This paper presents a novel method to identify the 2D axial Magnetic Resonance (MR) slice from a pre-acquired MR prostate volume that closely corresponds to the 2D axial Transrectal Ultrasound (TRUS) slice obtained during prostate biopsy. The method combines both shape and image intensity information. The segmented prostate contours in both the imaging modalities are described by shape-context representations and matched using the Chi-square distance. Normalized mutual information and correlation coefficient between the TRUS and MR slices are computed to find image similarities. Finally, the joint probability values comprising shape and image similarities are used in…
Fuzzy Distributed Genetic Approaches for Image Segmentation
2010
This paper presents a new image segmentation algorithm (called FDGA-Seg) based on a combination of fuzzy logic, multiagent systems and genetic algorithms. We propose to use a fuzzy representation of the image site labels by introducing some imprecision in the gray tones values. The distributivity of FDGA-Seg comes from the fact that it is designed around a MultiAgent System (MAS) working with two different architectures based on the master-slave and island models. A rich set of experimental segmentation results given by FDGA-Seg is discussed and compared to the ICM results in the last section.
Statistical Shape and Probability Prior Model for Automatic Prostate Segmentation
2011
International audience; Accurate prostate segmentation in Trans Rectal Ultra Sound (TRUS) images is an important step in different clinical applications. However, the development of computer aided automatic prostate segmentation in TRUS images is a challenging task due to low contrast, heterogeneous intensity distribution inside the prostate region, imaging artifacts like shadow, and speckle. Significant variations in prostate shape, size and contrast between the datasets pose further challenges to achieve an accurate segmentation. In this paper we propose to use graph cuts in a Bayesian framework for automatic initialization and propagate multiple mean parametric models derived from princi…