Search results for "Interaction"

showing 10 items of 5710 documents

Impact of High pH Stress on Yeast Gene Expression: A Comprehensive Analysis of mRNA Turnover During Stress Responses.

2015

Environmental alkalinisation represents a stress condition for yeast Saccharomyces cerevisiae, to which this organism responds with extensive gene expression remodelling. We show here that alkaline pH causes an overall decrease in the transcription rate (TR) and a fast destabilisation of mRNAs, followed by a more prolonged stabilisation phase. In many cases, augmented mRNA levels occur without the TR increasing, which can be attributed to mRNA stabilisation. In contrast, the reduced amount of mRNAs is contributed by both a drop in the TR and mRNA stability. A comparative analysis with other forms of stress shows that, unlike high pH stress, heat-shock, osmotic and oxidative stresses present…

Saccharomyces cerevisiae ProteinsTranscription GeneticRNA StabilitySaccharomyces cerevisiaeBiophysicsSaccharomyces cerevisiaeOxidative phosphorylationBiochemistryStress (mechanics)Stress PhysiologicalStructural BiologyGene Expression Regulation FungalGene expressionGeneticsRNA MessengerDestabilisationRNA Processing Post-TranscriptionalMolecular BiologyGeneMessenger RNAbiologyHydrogen-Ion Concentrationbiology.organism_classificationYeastCell biologyBiochemistryGene-Environment Interaction
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Suicidi

2020

I suicidi, eventi drammatici come pochi altri, hanno da sempre costituito una sfida per l’immaginazione sociologica. Se Emile Durkheim aveva dimostrato le capacità esplicative della sociologia, le sociologie costruzioniste – e, in particolare, interazionismo simbolico, etnometodologia, fenomenologia – hanno operato la resa dei conti con gli approcci positivisti. I saggi che qui presentiamo offrono una summa di grande interesse dei modi originali con cui le sociologie costruzioniste hanno re-immaginato lo studio dei suicidi andando oltre la rigidità dello schema “cause e cure” degli approcci positivisti ed arricchendo di sfumature la nostra comprensione del fenomeno. Di fronte a un panorama …

SackGarfinkelfenomenologiaSucideethnomethodologyinterazionismo simbolicoetnometodologiaSettore SPS/12 - Sociologia Giuridica Della Devianza E Mutamento SocialephenomenologyJacobWilkinSucidioAtkinsonDouglassymbolic interactionism
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Physical properties and Extracellular Polymeric Substances pattern of aerobic granular sludge treating hypersaline wastewater.

2017

The modification of the physical properties of aerobic granular sludge treating fish-canning wastewater is discussed in this paper. The structure and composition of the Extracellular Polymeric Substances (EPSs) were analyzed at different salinity levels and related to granules stability. Results outlined that the total EPSs content increased with salinity, despite the EPSs increment was not proportional to the salt concentration. Moreover, the EPSs structure was significantly modified by salinity, leading to a gradual increase of the not-bound EPSs fraction, which was close to the 50% of the total EPSs content at 75 g NaCl L-1. The increasing salt concentration modified also the EPSs compos…

SalinityEnvironmental Engineering0208 environmental biotechnologyBioengineering02 engineering and technology010501 environmental sciencesSodium ChlorideWastewater01 natural sciencesWaste Disposal FluidProtein contentExtracellular polymeric substanceBiopolymersBioreactorsFood-Processing IndustryWaste Management and Disposal0105 earth and related environmental sciencesSettore ICAR/03 - Ingegneria Sanitaria-AmbientaleSewageRenewable Energy Sustainability and the EnvironmentChemistryGranule (cell biology)General MedicineAerobiosis020801 environmental engineeringSalinityChemical engineeringWastewaterAerobic granular sludge EPS Industrial wastewater Fish-canning wastewater Hypersaline wastewaterGradual increaseHydrophobic and Hydrophilic InteractionsBioresource technology
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Sulfur cycling and methanogenesis primarily drive microbial colonization of the highly sulfidic Urania deep hypersaline basin

2009

Urania basin in the deep Mediterranean Sea houses a lake that is >100 m deep, devoid of oxygen, 6 times more saline than seawater, and has very high levels of methane and particularly sulfide (up to 16 mM), making it among the most sulfidic water bodies on Earth. Along the depth profile there are 2 chemoclines, a steep one with the overlying oxic seawater, and another between anoxic brines of different density, where gradients of salinity, electron donors and acceptors occur. To identify and differentiate the microbes and processes contributing to the turnover of organic matter and sulfide along the water column, these chemoclines were sampled at a high resolution. Bacterial cell numbers…

SalinitySulfideMethanogenesisMolecular Sequence Datageosphere-biosphere interactionchemistry.chemical_elementGEO/01 - PALEONTOLOGIA E PALEOECOLOGIA03 medical and health sciencesWater columnelement cyclingMediterranean SeaSeawater14. Life underwaterEcosystemComputingMilieux_MISCELLANEOUS030304 developmental biology2. Zero hungerchemistry.chemical_classification[SDU.OCEAN]Sciences of the Universe [physics]/Ocean AtmosphereManganese0303 health sciencesNitratesMultidisciplinaryBacteriabiology030306 microbiologyEcologyWaterdeep anoxic hypersaline lake15. Life on landbiology.organism_classificationArchaeaSulfurAnoxic waters6. Clean waterOxygenRedox gradientchemistryDeep anoxic hypersaline lake; Element cycling; Geosphere-biosphere interaction; Mediterranean Sea; Microbial diversityEnvironmental chemistrymicrobial diversityPhysical SciencesSeawaterdeep anoxic hypersaline lake element cycling geosphere–biosphere interaction Mediterranean Sea microbial diversitySulfurArchaea
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The role of saliva in aroma release and perception

2017

Aroma perception is an important factor driving food acceptance. Volatile organic compounds (VOCs) are released from the food matrix and then reach the receptors located in the nasal cavity, leading to their perception. These steps are closely dependent on the physicochemical properties of the volatile compounds and the food matrix, but also on human physiology. Among the different physiological parameters involved, the literature reports that saliva has various effects on VOCs and therefore appears as a major actor impacting the perception of aroma. This article reviews how saliva takes part in aroma release, considering both in vitro and in vivo approaches, and how it may affect perceptio…

Salivavolatile organic compound[ SDV.AEN ] Life Sciences [q-bio]/Food and Nutritionmedia_common.quotation_subjectsalivary proteinsprotéine salivaireAnalytical Chemistry0404 agricultural biotechnologyPerceptionvolatile organic compoundsHumansflaveurFood sciencesaliveAromamedia_commonenzymatic reactionAffect perceptionMolecular interactionssalivabiologyChemistryenzymatic conversioncomposé organique volatilFood acceptancefood and beverages04 agricultural and veterinary sciencesGeneral MedicineHuman physiologymucinslibération d'arômeinteractionsbiology.organism_classification040401 food scienceflavourBiochemistryaroma releaseOdorantsréaction enzymatiquePerceptionIndirect impact[SDV.AEN]Life Sciences [q-bio]/Food and NutritionFood Science
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Resveratrol-induced xenophagy promotes intracellular bacteria clearance in intestinal epithelial cells and macrophages

2019

International audience; Autophagy is a lysosomal degradation process that contributes to host immunity by eliminating invasive pathogens and the modulating inflammatory response. Several infectious and immune disorders are associated with autophagy defects, suggesting that stimulation of autophagy in these diseases should be bene ficial. Here, we show that resveratrol is able to boost xenophagy, a selective form of autophagy that target invasive bacteria. We demonstrated that resveratrol promotes in vitro autophagy-dependent clearance of intracellular bacteria in intestinal epithelial cells and macrophages. These results were validated in vivo using infection in a transgenic GFP-LC3 zebra f…

Salmonella typhimuriumrestrictionResveratrolresveratrolMicechemistry.chemical_compound0302 clinical medicine[SDV.IDA]Life Sciences [q-bio]/Food engineeringImmunologieXenophagyImmunology and AllergyIntestinal MucosaZebrafishOriginal Research0303 health sciencessalmonella infectionbiologyChemistrycrohns-disease[SDV.IDA] Life Sciences [q-bio]/Food engineering3. Good healthCell biologyrégime alimentaire030220 oncology & carcinogenesisHost-Pathogen InteractionsAIEClcsh:Immunologic diseases. AllergyautophagysalmonelleTransgenesalmonellaImmunologyautophagieCell Line03 medical and health sciencesImmune systemxenophagyEscherichia coliAnimalsHumans030304 developmental biologyselective autophagyhealthy-volunteersmodelEnterocolitisMacrophagesIntracellular parasiteAutophagylife-span extensionautophagy;resveratrol;xenophagy;salmonella;AIECagent resveratrolEpithelial Cellsbiology.organism_classification[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyCell cultureactivation[SDV.MP.BAC] Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriologyproteinlcsh:RC581-607Bacteria
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The gas-phase chemiionization reaction between samarium and oxygen atoms: A theoretical study

2004

The Sm + O chemiionization reaction has been investigated theoretically using a method that allows for correlation and relativistic effects. Potential energy curves have been calculated for several electronic states of SmO and SmO+. Comparison with available spectroscopic and thermodynamic values for these species is reported and a mechanism for the chemiionization reaction Sm + O is proposed. The importance of spin–orbit coupling in the excited states of SmO, in allowing this chemiionization reaction to take place, has been revealed by these calculations. This paper shows the metal-plus-oxidant chemiionization reaction.

SamariumExcited statesGeneral Physics and Astronomychemistry.chemical_elementRelativistic correctionsPotential energyOxygenOxygenSamariumAtom-atom reactionsOxygen atomchemistryPotential energy surfacesExcited stateIonizationddc:540OxidationSpin-orbit interactionsPhysical and Theoretical ChemistryAtomic physicsRelativistic quantum chemistryChain reactionIonisationThe Journal of Chemical Physics
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A novel Usher protein network at the periciliary reloading point between molecular transport machineries in vertebrate photoreceptor cells.

2008

Contains fulltext : 69178.pdf (Publisher’s version ) (Closed access) The human Usher syndrome (USH) is the most frequent cause of combined deaf-blindness. USH is genetically heterogeneous with at least 12 chromosomal loci assigned to three clinical types, USH1-3. Although these USH types exhibit similar phenotypes in human, the corresponding gene products belong to very different protein classes and families. The scaffold protein harmonin (USH1C) was shown to integrate all identified USH1 and USH2 molecules into protein networks. Here, we analyzed a protein network organized in the absence of harmonin by the scaffold proteins SANS (USH1G) and whirlin (USH2D). Immunoelectron microscopic anal…

Scaffold proteinGenetics and epigenetic pathways of disease [NCMLS 6]XenopusCell Cycle ProteinsNerve Tissue ProteinsBiologyIn Vitro TechniquesNeuroinformatics [DCN 3]TransfectionModels BiologicalReceptors G-Protein-CoupledMiceChlorocebus aethiopsProtein Interaction MappingGeneticsPerception and Action [DCN 1]otorhinolaryngologic diseasesAnimalsHumansNeurosensory disorders [UMCN 3.3]Cell Cycle ProteinMicroscopy ImmunoelectronMolecular BiologyIntegral membrane proteinGenetics (clinical)Adaptor Proteins Signal TransducingRenal disorder [IGMD 9]GeneticsMice KnockoutExtracellular Matrix ProteinsCiliumSignal transducing adaptor proteinMembrane ProteinsGeneral MedicineTransmembrane proteinCell biologyMice Inbred C57BLCytoskeletal ProteinsEctodomainGenetic defects of metabolism [UMCN 5.1]COS CellsNIH 3T3 CellsCervical collarUsher SyndromesFunctional Neurogenomics [DCN 2]Photoreceptor Cells VertebrateSubcellular FractionsImmunity infection and tissue repair [NCMLS 1]
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Phosphorylation of the Usher syndrome 1G protein SANS controls Magi2-mediated endocytosis.

2014

Item does not contain fulltext The human Usher syndrome (USH) is a complex ciliopathy with at least 12 chromosomal loci assigned to three clinical subtypes, USH1-3. The heterogeneous USH proteins are organized into protein networks. Here, we identified Magi2 (membrane-associated guanylate kinase inverted-2) as a new component of the USH protein interactome, binding to the multifunctional scaffold protein SANS (USH1G). We showed that the SANS-Magi2 complex assembly is regulated by the phosphorylation of an internal PDZ-binding motif in the sterile alpha motif domain of SANS by the protein kinase CK2. We affirmed Magi2's role in receptor-mediated, clathrin-dependent endocytosis and showed tha…

Scaffold proteinGuanylate kinaseMolecular Sequence DataPrimary Cell CultureNerve Tissue ProteinsBiologyEndocytosisPhotoreceptor cellExocytosisMiceCiliogenesisGeneticsmedicineAnimalsHumansProtein Interaction Domains and MotifsAmino Acid SequencePhosphorylationRNA Small InterferingSensory disorders Radboud Institute for Molecular Life Sciences [Radboudumc 12]Molecular BiologyGenetics (clinical)Adaptor Proteins Signal TransducingBinding SitesGeneral MedicineClathrinEndocytosisCell biologyMice Inbred C57BLRenal disorders Radboud Institute for Molecular Life Sciences [Radboudumc 11]medicine.anatomical_structureHEK293 CellsGene Expression RegulationCiliary pocketCarrier ProteinsSterile alpha motifGuanylate KinasesSequence AlignmentUsher SyndromesPhotoreceptor Cells VertebrateProtein BindingSignal TransductionHuman molecular genetics
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Isolation of the silicatein-α interactor silintaphin-2 by a novel solid-phase pull-down assay.

2011

The skeleton of siliceous sponges consists of amorphous biogenous silica (biosilica). Biosilica formation is driven enzymatically by means of silicatein(s). During this unique process of enzymatic polycondensation, skeletal elements (spicules) that enfold a central proteinaceous structure (axial filament), mainly comprising silicatein, are formed. However, only the concerted action of silicatein and other proteins can explain the genetically controlled diversity of spicular morphotypes, from simple rods with pointed ends to intricate structures with up to six rays. With the scaffold protein silintaphin-1, a first silicatein interactor that facilitates the formation of the axial filament and…

Scaffold proteinSpiculeImmunoprecipitationMolecular Sequence DataNanotechnologyBiologyFlagellumBiochemistry03 medical and health sciencesSponge spiculePhase (matter)Two-Hybrid System TechniquesProtein Interaction MappingAnimalsInteractorAmino Acid Sequence030304 developmental biology0303 health sciences030302 biochemistry & molecular biologySilicon DioxideCathepsinsYeastProtein TransportSpectrometry Mass Matrix-Assisted Laser Desorption-IonizationBiophysicsAutoradiographyCalciumSuberitesProtein BindingBiochemistry
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