Search results for "Interactions"

showing 10 items of 1963 documents

Bridge-Clamp Bis(tetrazine)s with [N] 8 π-Stacking Interactions and Azido- s -Aryl Tetrazines: Two Classes of Doubly Clickable Tetrazines

2020

Click chemistry at a tetrazine core is useful for bioorthogonal labeling and crosslinking. Introduced here are two new classes of doubly clickable s-aryl tetrazines synthesized by Cu-catalyzed cross-coupling. Homocoupling of o-brominated s-aryl tetrazines leads to bis(tetrazine)s structurally characterized by tetrazine cores arranged face-to-face. [N]8 π-stacking interactions are essential to the conformation. Upon inverse electron demand Diels-Alder (iEDDA) cycloaddition, the bis(tetrazine)s produce a unique staple structure. The o-azidation of s-aryl tetrazines introduces a second proximal intermolecular clickable function that leads to double click chemistry opportunities. The stepwise i…

chemistry.chemical_classificationTrifluoromethylation010405 organic chemistryChemistryArylThio-General ChemistryGeneral Medicine010402 general chemistryCombinatorial chemistry01 natural sciencesBridge (interpersonal)CatalysisCycloaddition0104 chemical sciencesTetrazinechemistry.chemical_compoundPolymer chemistryClick chemistryNon-covalent interactions[CHIM]Chemical SciencesClickableBioorthogonal chemistry
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Nonlocal van der Waals Approach Merged with Double-Hybrid Density Functionals: Toward the Accurate Treatment of Noncovalent Interactions

2015

Noncovalent interactions drive the self-assembly of weakly interacting molecular systems to form supramolecular aggregates, which play a major role in nanotechnology and biochemistry. In this work, we present a thorough assessment of the performance of different double-hybrid density functionals (PBE0-DH-NL, revPBE0-DH-NL, B2PLYP-NL, and TPSS0-DH-NL), as well as their parent hybrid and (meta)GGA functionals, in combination with the most modern version of the nonlocal (NL) van der Waals correction. It is shown that this nonlocal correction can be successfully coupled with double-hybrid density functionals thanks to the short-range attenuation parameter b, which has been optimized against ref…

chemistry.chemical_classificationWork (thermodynamics)Noncovalent interactionsComputer scienceSupramolecular chemistryMolecular systemscomputer.software_genreComputer Science ApplicationsRange (mathematics)symbols.namesakechemistrysymbolsNon-covalent interactionsQuímica FísicaStatistical physicsData miningDouble-hybrid functionalsPhysical and Theoretical Chemistryvan der Waals forcecomputerJournal of Chemical Theory and Computation
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Cover Feature: Towards Atomically Precise Supported Catalysts from Monolayer‐Protected Clusters: The Critical Role of the Support (Chem. Eur. J. 31/2…

2020

chemistry.chemical_classificationX-ray absorption spectroscopyChemistryChemical physicsFeature (computer vision)Organic ChemistryMonolayerNon-covalent interactionsCover (algebra)General ChemistryCatalysisCatalysisChemistry – A European Journal
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Titelbild: Achieving Strong Positive Cooperativity through Activating Weak Non‐Covalent Interactions (Angew. Chem. 3/2018)

2017

chemistry.chemical_classificationchemistry010405 organic chemistryStereochemistryCooperative bindingNon-covalent interactionsGeneral Medicine010402 general chemistry01 natural sciences0104 chemical sciencesAngewandte Chemie
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Cover Picture: Achieving Strong Positive Cooperativity through Activating Weak Non‐Covalent Interactions (Angew. Chem. Int. Ed. 3/2018)

2018

chemistry.chemical_classificationchemistryStereochemistrySupramolecular chemistryCooperative bindingNon-covalent interactionsCover (algebra)CooperativityGeneral ChemistrySelf-assemblyHost–guest chemistryCatalysisAngewandte Chemie International Edition
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Single-Crystal X-ray Diffraction and Solution Studies of Anion-π Interactions inN-(Pentafluorobenzyl)pyridinium Salts

2014

A solid-state structural study on anion–π interaction in various N-(pentafluorobenzyl)pyridinium salts accompanied by NMR spectroscopic investigations is presented. The crystal structures of 1a–1d reveal different kinds of contacts with anions, including anion–π interactions. In particular, the solid-state structure of 1b-I3 shows distinct evidence of anion–π interactions. Attempts to study anion–π interactions in solution were not successful, but their presence in solution could not be ruled out.

chemistry.chemical_classificationchemistry.chemical_compoundCrystallographychemistryOrganic ChemistryInorganic chemistryX-ray crystallographyNon-covalent interactionsPyridiniumCrystal structurePhysical and Theoretical ChemistrySingle crystalIonEuropean Journal of Organic Chemistry
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Advanced descriptors for long-range noncovalent interactions between SARS-CoV-2 spikes and polymer surfaces.

2021

The recent pandemic triggered numerous societal efforts aimed to control and limit the spread of SARS-CoV-2. One of these aspects is related on how the virion interacts with inanimate surfaces, which might be the source of secondary infection. Although recent works address the adsorption of the spike protein on surfaces, there is no information concerning the long-range interactions between spike and surfaces, experimented by the virion when is dispersed in the droplet before its possible adsorption. Some descriptors, namely the interaction potentials per single protein and global potentials, were calculated in this work. These descriptors, evaluated for the closed and open states of the sp…

chemistry.chemical_classificationclosed and open structuresDensity Functional calculationsSecondary infectionIonic bondingFiltration and SeparationPolymerArticleAnalytical Chemistrychemistry.chemical_compoundAdsorptionPolylactic acidchemistryChemical physicsCovalent bondlong-range interaction potential energiesPolyethylene terephthalateNon-covalent interactionssurface affinity descriptorsSARS-CoV-2 spike proteinsMolecular Mechanics and Dynamics simulationsSeparation and purification technology
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Coordination complexes of chromium(0) with a series of 1,3-diphenyl-6-arylfulvenes

2018

The synthesis and structural properties of a series of chromium tricarbonyl `piano-stool' complexes bearing substituted pentafulvene ligands were studied. The complexes, tricarbonyl(1,3,6-triphenylfulvene)chromium(0) benzene hemisolvate, [Cr(C24H18)(CO)3]·0.5C6H6 (I), tricarbonyl[1,3-diphenyl-6-(3-vinylphenyl)fulvene]chromium(0), [Cr(C26H20)(CO)3] (II), and tricarbonyl[1,3-diphenyl-6-(pyren-1-yl)fulvene]chromium(0), [Cr(C34H22)(CO)3] (III), each have a distorted octahedral geometry, with the fulvene coordinated in a π–η2:π–η2:π–η2 fashion. Significant deviation of the exocyclic fulvene double bond from the cyclopentadiene plane accompanies coordination. Evidence of non-covalent π–π interact…

chemistry.chemical_classificationcrystal structureCrystallographyDouble bond010405 organic chemistryArylpiano stoolchemistry.chemical_elementGeneral ChemistryCrystal structure010402 general chemistryCondensed Matter PhysicsFulvenes01 natural sciencesMedicinal chemistry0104 chemical scienceschemistry.chemical_compoundChromiumpentafulvenechemistryQD901-999General Materials Sciencechromiumπ-π interactionsFulveneActa Crystallographica Section E Crystallographic Communications
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Crystal structures of isomeric 3,5-dichloro-N-(2,3-dimethylphenyl)benzenesulfonamide, 3,5-dichloro-N-(2,6-dimethylphenyl)benzenesulfonamide and 3,5-d…

2017

The crystal structures of three isomeric compounds of formula C14H13Cl2NO2S, namely 3,5-dichloro-N-(2,3-dimethylphenyl)-benzenesulfonamide (I), 3,5-dichloro-N-(2,6-dimethylphenyl)benzenesulfonamide (II) and 3,5-dichloro-N-(3,5-dimethylphenyl)benzenesulfonamide (III) are described. The molecules of all the three compounds are U-shaped with the two aromatic rings inclined at 41.3 (6)° in (I), 42.1 (2)° in (II) and 54.4 (3)° in (III). The molecular conformation of (II) is stabilized by intramolecular C—H...O hydrogen bonds and C—H...π interactions. The crystal structure of (I) features N—H...O hydrogen-bonded R 2 2(8) loops interconnected via C(7) chains of C—H...O interactions, forming a thre…

chemistry.chemical_classificationcrystal structureC—H...O interactionsCrystallography010405 organic chemistryHydrogen bondAromaticityGeneral ChemistryCrystal structure010403 inorganic & nuclear chemistryCondensed Matter Physics01 natural sciences0104 chemical sciencesSulfonamideCrystallographychemistry.chemical_compoundN—H...O hydrogen bondsC—H...π interactionschemistryQD901-999sulfonamidesπ–π interactionsGeneral Materials ScienceBenzeneActa Crystallographica Section E: Crystallographic Communications
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Studies of Nature of Uncommon Bifurcated I–I···(I–M) Metal-Involving Noncovalent Interaction in Palladium(II) and Platinum(II) Isocyanide Cocrystals

2021

Two isostructural trans-[MI2(CNXyl)2]·I2 (M = Pd or Pt; CNXyl = 2,6-dimethylphenyl isocyanide) metallopolymeric cocrystals containing uncommon bifurcated iodine···(metal–iodide) contact were obtained. In addition to classical halogen bonding, single-crystal X-ray diffraction analysis revealed a rare type of metal-involved stabilizing contact in both cocrystals. The nature of the noncovalent contact was studied computationally (via DFT, electrostatic surface potential, electron localization function, quantum theory of atoms in molecules, and noncovalent interactions plot methods). Studies confirmed that the I···I halogen bond is the strongest noncovalent interaction in the systems, followed …

chemistry.chemical_classificationplatinaHalogen bondhalogeenit010405 organic chemistryChemistryIsocyanideAtoms in moleculeskompleksiyhdisteet010402 general chemistrypalladium01 natural sciencesCocrystalElectron localization function0104 chemical sciencesInorganic Chemistrychemistry.chemical_compoundCrystallographykemialliset sidoksetNucleophileNon-covalent interactionsPhysical and Theoretical ChemistryIsostructuralmetallit
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