Search results for "Ion transfer"

showing 10 items of 90 documents

Information Dynamics Analysis: A new approach based on Sparse Identification of Linear Parametric Models*

2020

The framework of information dynamics allows to quantify different aspects of the statistical structure of multivariate processes reflecting the temporal dynamics of a complex network. The information transfer from one process to another can be quantified through Transfer Entropy, and under the assumption of joint Gaussian variables it is strictly related to the concept of Granger Causality (GC). According to the most recent developments in the field, the computation of GC entails representing the processes through a Vector Autoregressive (VAR) model and a state space (SS) model typically identified by means of the Ordinary Least Squares (OLS). In this work, we propose a new identification …

Multivariate statisticsComputer scienceEntropyGaussian0206 medical engineeringNormal Distribution02 engineering and technology01 natural sciencesLASSO regression010305 fluids & plasmassymbols.namesakeinformation TransferState Space modelsGranger causalityLasso (statistics)0103 physical sciencesStatistics::MethodologyState spaceLeast-Squares AnalysisShrinkageSparse matrixElectroencephalography020601 biomedical engineeringinformation Transfer; LASSO regression; State Space models; Granger causalityAutoregressive modelstate space modelParametric modelOrdinary least squaresLinear ModelssymbolsGranger causalityTransfer entropyAlgorithmInformation dyancamic analysi
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MuTE: a MATLAB toolbox to compare established and novel estimators of the multivariate transfer entropy.

2014

A challenge for physiologists and neuroscientists is to map information transfer between components of the systems that they study at different scales, in order to derive important knowledge on structure and function from the analysis of the recorded dynamics. The components of physiological networks often interact in a nonlinear way and through mechanisms which are in general not completely known. It is then safer that the method of choice for analyzing these interactions does not rely on any model or assumption on the nature of the data and their interactions. Transfer entropy has emerged as a powerful tool to quantify directed dynamical interactions. In this paper we compare different ap…

Multivariate statisticsInformation transferTheoretical computer scienceComputer scienceEntropyInformation TheorySocial SciencesCAUSALITYMedicine (all); Biochemistry Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)BioinformaticsMedicine and Health SciencesEntropy (energy dispersal)MultidisciplinaryEntropy (statistical thermodynamics)Medicine (all)QSoftware DevelopmentREstimatorSoftware EngineeringElectroencephalographyCausalityNeurologyCardiovascular DiseasesProbability distributionMedicineAlgorithmsResearch ArticleComputer ModelingComputer and Information SciencesScienceCardiologyProbability density functionEntropy (classical thermodynamics)Artificial IntelligenceLinear regressionEntropy (information theory)HumansComputer SimulationEntropy (arrow of time)Conditional entropyBiochemistry Genetics and Molecular Biology (all)EpilepsyBiology and Life SciencesModels TheoreticalMODELNonlinear systemAgricultural and Biological Sciences (all)ROC CurveINFORMATION-TRANSFERSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaCognitive ScienceTransfer entropySoftwareEntropy (order and disorder)NeurosciencePLoS ONE
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Measuring Connectivity in Linear Multivariate Processes: Definitions, Interpretation, and Practical Analysis

2011

This tutorial paper introduces a common framework for the evaluation of widely used frequency-domain measures of coupling (coherence, partial coherence) and causality (directed coherence, partial directed coherence) from the parametric representation of linear multivariate (MV) processes. After providing a comprehensive time-domain definition of the various forms of connectivity observed in MV processes, we particularize them to MV autoregressive (MVAR) processes and derive the corresponding frequency-domain measures. Then, we discuss the theoretical interpretation of these MVAR-based connectivity measures, showing that each of them reflects a specific time-domain connectivity definition an…

Multivariate statisticsInformation transferTime FactorsArticle SubjectImmunology and Microbiology (all)Computer scienceBiostatisticslcsh:Computer applications to medicine. Medical informaticsGeneral Biochemistry Genetics and Molecular BiologyCausality (physics)HumansRepresentation (mathematics)Parametric statisticsBiochemistry Genetics and Molecular Biology (all)General Immunology and MicrobiologyMedicine (all)Applied MathematicsMedicine (all); Modeling and Simulation; Immunology and Microbiology (all); Biochemistry Genetics and Molecular Biology (all); Applied MathematicsElectroencephalographySignal Processing Computer-AssistedGeneral MedicineCoherence (statistics)Nonlinear DynamicsAutoregressive modelModeling and SimulationFrequency domainSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaMultivariate AnalysisLinear Modelslcsh:R858-859.7AlgorithmResearch ArticleComputational and Mathematical Methods in Medicine
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Decomposing the transfer entropy to quantify lag-specific Granger causality in cardiovascular variability.

2013

We present a modification of the well known transfer entropy (TE) which makes it able to detect, besides the direction and strength of the information transfer between coupled processes, its exact timing. The approach follows a decomposition strategy which identifies--according to a lag-specific formulation of the concept of Granger causality--the set of time delays carrying significant information, and then assigns to each of these delays an amount of information transfer such that the total contribution yields the overall TE. We propose also a procedure for the practical estimation from time series data of the relevant delays and lag-specific TE in both bivariate and multivariate settings…

Multivariate statisticsMathematical optimizationInformation transferMedicine (all)LagEntropyBivariate analysisCardiovascular Physiological PhenomenaGranger causalitySettore ING-INF/06 - Bioingegneria Elettronica E InformaticaMultivariate AnalysisEntropy (information theory)HumansTransfer entropyComputer SimulationTime seriesAlgorithmsMathematicsAnnual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
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Under my wing: lesser kestrels and jackdaws derive reciprocal benefits in mixed-species colonies

2011

In mixed-species assemblages, antipredator benefits for a timid species nesting close to a more pugnacious one are often reported. Advantages for the protected species are usually manifested in terms of higher reproductive success than conspecifics nesting remote to the protector species. Whether the protector species also accrues any benefit remains untested, and the species-specific behavioral traits underlying enhanced reproductive output in mixed-species associations remain poorly documented. We studied associations between lesser kestrels (Falco naumanni) and jackdaws (Corvus monedula) nesting in rural buildings in the Gela Plain (Italy). We tested for interspecific interactions of jac…

Mutualism (biology)biologyReproductive successantipredator behavior Corvus monedula Falco naumanni information transfer interspecific interactions mutualism predator protection vigilance.EcologySettore BIO/05 - ZoologiaFalco naumanniInterspecific competitionbiology.organism_classificationPredationVigilance (behavioural ecology)NestAnimal Science and ZoologyPredatorEcology Evolution Behavior and SystematicsBehavioral Ecology
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Measurement of high energy resolution inelastic proton scattering at and close to zero degrees

2009

13 pages, 15 figures.-- Printed version published Jul 1, 2009.

Nuclear and High Energy PhysicsHigh energy resolutionM1 excitationForward scatterCyclotronMeasurement at 0 degreesTRANSITIONSInelastic scatteringDispersion matchingISOVECTORlaw.inventionSHELL NUCLEINuclear physicsNUCLEON-NUCLEON INTERACTIONlawBEAM LINEE1 Coulomb excitationFOCAL-PLANE POLARIMETERInstrumentationInelastic proton scatteringPolarization transfer coefficientsISOSCALARElastic scatteringPhysicsBackground subtractionPolarization transfer coefficientScatteringResolution (electron density)SPIN EXCITATIONSBeamlinePhysics::Accelerator PhysicsMeasurement at 0ºAtomic physicsSPECTROMETER GRAND RAIDENINTERMEDIATE ENERGIES
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State of the art of CPMAS 13C-NMR spectroscopy applied to natural organic matter

2004

A number of different techniques are presently available for characterizing humified natural organic matter (NOM). Carbon-13 nuclear magnetic resonance spectroscopy (13C-NMR) in the solid state using cross-polarization (CP) and magic angle spinning (MAS) represents the most powerful experimental approach used to collect direct information on the structural and conformational characteristics of humic carbon backbones. Despite the problems due to the presence of paramagnetic impurities and the generally low organic matter concentration, cross-polarization magic angle spinning 13C-NMR spectroscopy (CPMAS 13C-NMR) is applied in soil chemistry and geochemistry mainly because of its relevance in …

Nuclear and High Energy PhysicsMaterials scienceChemistryContact timeNatural organic matterNuclear magnetic resonanceCross-polarization magic angle spinningCarbon-13Settore AGR/13 - Chimica AgrariaCarbon-13Analytical chemistrySolid-stateGeneral MedicineBiochemistryNatural organic matterSpectral lineAnalytical Chemistry13c nmr spectroscopyChemical physicsSpin diffusionMagnetization transferSpinningSpectroscopyProgress in Nuclear Magnetic Resonance Spectroscopy
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Light baryons and their electromagnetic interactions in the covariant constituent quark model

2012

We extend the confined covariant constituent quark model that was previously developed by us for mesons to the baryon sector. In our numerical calculation we use the same values for the constituent quark masses and the infrared cutoff as have been previously used in the meson sector. In a first application we describe the static properties of the proton and neutron, and the $\Lambda$-hyperon (magnetic moments and charge radii) and the behavior of the nucleon form factors at low momentum transfers. We discuss in some detail the conservation of gauge invariance of the electromagnetic transition matrix elements in the presence of a nonlocal coupling of the baryons to the three constituent quar…

Nuclear and High Energy PhysicsParticle physicsMesonHigh Energy Physics::LatticeNuclear TheoryConstituent quarkDown quarkFOS: Physical sciencesPROTONBottom quarkHigh Energy Physics - Phenomenology (hep-ph)Nuclear ExperimentPhysicsCOMPOSITE PARTICLESELASTIC SCATTERINGPOLARIZATION TRANSFERHigh Energy Physics::PhenomenologyHyperonRELATIVISTIC 3-QUARK MODELMAGNETIC FORM-FACTORDEUTERONBaryonHigh Energy Physics - PhenomenologyQuantum electrodynamicsHEAVY BARYONSUp quarkNEUTRONHigh Energy Physics::ExperimentSQUARED 4-MOMENTUM TRANSFERSNucleon
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Assessment of cortical damage in early multiple sclerosis with quantitative T 2 relaxometry

2016

T2 relaxation time is a quantitative MRI in vivo surrogate of cerebral tissue damage in multiple sclerosis (MS) patients. Cortical T2 prolongation is a known feature in later disease stages, but has not been demonstrated in the cortical normal appearing gray matter (NAGM) in early MS. This study centers on the quantitative evaluation of the tissue parameter T2 in cortical NAGM in a collective of early MS and clinically isolated syndrome (CIS) patients, hypothesizing that T2 prolongation is already present at early disease stages and variable over space, in line with global and focal inflammatory processes in MS. Additionally, magnetization transfer ratio (MTR) mapping was performed for furt…

Pathologymedicine.medical_specialtyClinically isolated syndromemedicine.diagnostic_testbusiness.industryMultiple sclerosisMagnetic resonance imagingmedicine.disease030218 nuclear medicine & medical imaging03 medical and health sciences0302 clinical medicinemedicine.anatomical_structureCerebral cortexIn vivoRegion of interestCortex (anatomy)medicineMolecular MedicineRadiology Nuclear Medicine and imagingMagnetization transferbusiness030217 neurology & neurosurgerySpectroscopyNMR in Biomedicine
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Multimodal quantitative MRI assessment of cortical damage in relapsing-remitting multiple sclerosis

2016

Purpose To investigate magnetization transfer ratio (MTR), T1 relaxation time, and proton density (PD) as indicators of gray matter damage in relapsing-remitting multiple sclerosis (RRMS), reflecting different aspects of microstructural damage and as imaging correlates of clinical disability. We aimed to determine which of these parameters may optimally quantify cortical damage, and serve as an imaging surrogate of clinical disability. In this study, cortical values of MTR, a surrogate for demyelination in MS, of PD, reflecting replacement of neural tissue by water, and of T1 , indicating a complex array of microstructural changes, were assessed in a group of RRMS patients in comparison to …

Pathologymedicine.medical_specialtyExpanded Disability Status Scalemedicine.diagnostic_testbusiness.industryMultiple sclerosisArea under the curveMagnetic resonance imagingmedicine.disease030218 nuclear medicine & medical imaging03 medical and health sciences0302 clinical medicinemedicine.anatomical_structureRelapsing remittingCerebral cortexmedicineRadiology Nuclear Medicine and imagingMagnetization transferNuclear medicinebusinessProton density030217 neurology & neurosurgeryJournal of Magnetic Resonance Imaging
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