Search results for "Jackknife"
showing 8 items of 8 documents
Sexing birds using discriminant function analysis: a critical appraisal.
2011
9 pages; International audience; Discriminant function analysis (DFA) based on morphological measurements is a quick, inexpensive, and efficient method for sex determination in field studies on cryptically monomorphic bird species. However, behind the apparent standardization and relative simplicity of DFA lie subtle differences and pitfalls that have been neglected in some studies. Most of these concerns directly affect assessment of the discriminant performance, a parameter of crucial importance in practice because it provides a measure of the quality of an equation that may be used in later field studies. Using results from 141 published studies and simulations based on a large data set …
Stagewise pseudo-value regression for time-varying effects on the cumulative incidence
2015
In a competing risks setting, the cumulative incidence of an event of interest describes the absolute risk for this event as a function of time. For regression analysis, one can either choose to model all competing events by separate cause-specific hazard models or directly model the association between covariates and the cumulative incidence of one of the events. With a suitable link function, direct regression models allow for a straightforward interpretation of covariate effects on the cumulative incidence. In practice, where data can be right-censored, these regression models are implemented using a pseudo-value approach. For a grid of time points, the possibly unobserved binary event s…
Error estimation and reduction with cross correlations
2010
Besides the well-known effect of autocorrelations in time series of Monte Carlo simulation data resulting from the underlying Markov process, using the same data pool for computing various estimates entails additional cross correlations. This effect, if not properly taken into account, leads to systematically wrong error estimates for combined quantities. Using a straightforward recipe of data analysis employing the jackknife or similar resampling techniques, such problems can be avoided. In addition, a covariance analysis allows for the formulation of optimal estimators with often significantly reduced variance as compared to more conventional averages.
PACo: a novel procrustes application to cophylogenetic analysis.
2013
We present Procrustean Approach to Cophylogeny (PACo), a novel statistical tool to test for congruence between phylogenetic trees, or between phylogenetic distance matrices of associated taxa. Unlike previous tests, PACo evaluates the dependence of one phylogeny upon the other. This makes it especially appropriate to test the classical coevolutionary model that assumes that parasites that spend part of their life in or on their hosts track the phylogeny of their hosts. The new method does not require fully resolved phylogenies and allows for multiple host-parasite associations. PACo produces a Procrustes superimposition plot enabling a graphical assessment of the fit of the parasite phyloge…
Weighted-Average Least Squares (WALS): Confidence and Prediction Intervals
2022
We extend the results of De Luca et al. (2021) to inference for linear regression models based on weighted-average least squares (WALS), a frequentist model averaging approach with a Bayesian flavor. We concentrate on inference about a single focus parameter, interpreted as the causal effect of a policy or intervention, in the presence of a potentially large number of auxiliary parameters representing the nuisance component of the model. In our Monte Carlo simulations we compare the performance of WALS with that of several competing estimators, including the unrestricted least-squares estimator (with all auxiliary regressors) and the restricted least-squares estimator (with no auxiliary reg…
Extrapolation des inventaires de biodiversité incomplets : comment estimer au mieux le nombre d’espèces manquantes et prévoir l’effort additionnel d’…
2016
While approaching or even reaching total completeness remains the idealgoal of any species inventory, incomplete samplings are deemed to become more often the rule, that are significantly more difficult to cope with (such as (micro-) invertebrates, for example).However, once post-operated appropriately, incomplete samplings may provide farmore data than it would seem and it is indeed possible to obtain valuable extra information froma reliable mode of extrapolation of the so-called Species Accumulation Curve.In fact, numerous tools designed for the exploitation of incomplete samplings havealready been proposed in the literature but the concern, with these numerous different tools, isprecise…
Extrapolation of the Species Accumulation Curve for Incomplete Species Samplings: A New Nonparametric Approach to Estimate the Degree of Sample Compl…
2015
9 pages; International audience; Incomplete species samplings are deemed to remain the common practice in those groups of animals, such as small or micro- invertebrates, with numerous species that often are more or less difficult to detect in the field. Thus, extrapolating the Species Accumulation Curve as far as possible beyond the actual sample size may thus serve as a useful (although imperfect) surrogate to the desired, but practically inaccessible, complete samplings. In this context, several kinds of theoretical or empirical models for the Species Accumulation Curve and also a lot of estimators of the asymptotic limit of the Curve (i.e. total species richness) have been proposed. The …
Puuttuvan tiedon käsittely aivosähkökäyrämittauksissa
2016
Aivosähkökäyrämittaukset ovat tyypillisesti hyvin työläitä ja pitkäkestoisia. Näiden seikkojen johdosta otoskoot ovat usein pieniä. Lisäksi osa koehenkilöistä päätyy lopettamaan mittaukset kesken, tai ei jaksa keskittyä annetun ohjeistuksen mukaisesti. Näin ollen valmiiksi hyvin rajalliseen aineistoon syntyy puuttuvuutta siten, että tietyt osakokeet jäävät kokonaan mittaamatta joidenkin henkilöiden osalta. Aineistossa ilmenevä puuttuvuus on käsitelty aivojenkuvantamismittauksissa tavanomaisesti siten, että analyysiin otetaan mukaan vain niitä koehenkilöitä koskevat mittaukset, joilta ei puutu lainkaan tietoa. Tätä menetelmää kutsutaan täydellisten havaintorivien analyysiksi. Tällainen analy…