Search results for "LEM"

showing 10 items of 23327 documents

Exploring the presence of pollutants at sea: Monitoring heavy metals and pesticides in loggerhead turtles (Caretta caretta) from the western Mediterr…

2017

Marine turtles are considered good sentinel species for environmental assessment because of their long lifespan, feeding ecology, habitat use and migratory nature. In the present study, we assessed presence of cadmium, lead and mercury, together with organic pollutants, both in fat and muscle tissue of 25 stranded loggerhead turtles (Caretta caretta) stranded along the Valencian Community coast (East Spain) (43.7±13.5cm). Mean concentrations of Cd, Pb and Hg were 0.04μg/g w.w., 0.09μg/g w.w. and 0.03μg/g w.w. in fat and 0.05μg/g, 0.08μg/g and 0.04μg/g in muscle, respectively. These measures indicate a relatively low mean heavy metal concentration, which may be explained by juvenile size and…

0106 biological sciencesPollutionMediterranean climateEnvironmental Engineeringmedia_common.quotation_subjectSentinel specieschemistry.chemical_element010501 environmental sciencesBiology01 natural sciencesMetals HeavyMediterranean SeaAnimalsEnvironmental Chemistrymedia_common.cataloged_instanceSeawaterPesticidesEuropean unionWaste Management and Disposal0105 earth and related environmental sciencesmedia_commonPollutantEcology010604 marine biology & hydrobiologyPesticidePollutionTurtlesMercury (element)FisherychemistryHabitatSpainWater Pollutants ChemicalEnvironmental MonitoringScience of The Total Environment
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An early Ca2+ influx is a prerequisite to thaxtomin A-induced cell death in Arabidopsis thaliana cells

2008

International audience; The pathogenicity of various Streptomyces scabies isolates involved in potato scab disease was correlated with the production of thaxtomin A. Since calcium is known as an essential second messenger associated with pathogen-induced plant responses and cell death, it was investigated whether thaxtomin A could induce a Ca 2+ influx related to cell death and to other putative plant responses using Arabidopsis thaliana suspension cells, which is a convenient model to study plant–microbe interactions. A. thaliana cells were treated with micromolar concentrations of thaxto-min A. Cell death was quantified and ion flux variations were analysed from electrophysiological measu…

0106 biological sciencesProgrammed cell death[SDV.BIO]Life Sciences [q-bio]/BiotechnologyPhysiologyCellchemistry.chemical_element[SDV.BC.BC]Life Sciences [q-bio]/Cellular Biology/Subcellular Processes [q-bio.SC]Plant ScienceBiologyCalcium01 natural sciences03 medical and health sciences[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN][SDV.BC.IC]Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB]medicineArabidopsis thaliana[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM][SDV.BDD.GAM]Life Sciences [q-bio]/Development Biology/Gametogenesis030304 developmental biology0303 health sciencesVoltage-dependent calcium channelfood and beverages[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biology[SDV.BBM.MN]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular Networks [q-bio.MN]Streptomyces scabiesbiology.organism_classificationplant pathogenStreptomyces[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biomolecules [q-bio.BM][SDV.BV.AP]Life Sciences [q-bio]/Vegetal Biology/Plant breedingcell deaththaxtomin A[CHIM.POLY]Chemical Sciences/Polymersmedicine.anatomical_structureBiochemistrychemistryion channelSecond messenger systemCalciumSignal transduction010606 plant biology & botanyJournal of Experimental Botany
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The gypsy database (GyDB) of mobile genetic elements: release 2.0

2011

This article introduces the second release of the Gypsy Database of Mobile Genetic Elements (GyDB 2.0): a research project devoted to the evolutionary dynamics of viruses and transposable elements based on their phylogenetic classification (per lineage and protein domain). The Gypsy Database (GyDB) is a long-term project that is continuously progressing, and that owing to the high molecular diversity of mobile elements requires to be completed in several stages. GyDB 2.0 has been powered with a wiki to allow other researchers participate in the project. The current database stage and scope are long terminal repeats (LTR) retroelements and relatives. GyDB 2.0 is an update based on the analys…

0106 biological sciencesProtein domainretroelementsLineage (evolution)[SDV]Life Sciences [q-bio]Retroviridae ProteinsCaulimoviridaeEukaryote evolutioncomputer.software_genrephylogeny01 natural sciencesDatabases GeneticRefSeqPhylogenyPriority journalbase de données0303 health sciencesRetrovirusPhylogenetic treeDatabaseSequence analysisdatabases geneticArticlesClassificationChemistryGenetic lineRetroelementsGenetic databaseComputer programBiologyArticleMobile genetic element03 medical and health sciencesLong terminal repeatWeb pagephylogénieVirus proteinGeneticsLife Science[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyAccess to informationTransposon030304 developmental biologyretroelements;phylogeny;software;terminal repeat sequences;databases geneticHidden Markov modelCauliflower mosaic virusCaulimovirussoftwareRetroposonTerminal Repeat SequencesDNA structureInterspersed Repetitive Sequencesterminal repeat sequencesNonhumanRetroviridaeData analysis softwareGenetic variabilityMobile genetic elementscomputerLENGUAJES Y SISTEMAS INFORMATICOSSoftware010606 plant biology & botanyPhylogenetic nomenclaturePhylogenetic tree
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Current and future suitability of wintering grounds for a long-distance migratory raptor

2017

Conservation of migratory species faces the challenge of understanding the ecological requirements of individuals living in two geographically separated regions. In some cases, the entire population of widely distributed species congregates at relatively small wintering areas and hence, these areas become a priority for the species’ conservation. Satellite telemetry allows fine tracking of animal movements and distribution in those less known, often remote areas. Through integrating satellite and GPS data from five separated populations comprising most of the breeding range, we created a wide habitat suitability model for the Eleonora’s falcon on its wintering grounds in Madagascar. On this…

0106 biological sciencesRange (biology)SciencePopulationClimate changeDistribution (economics)Suitability010603 evolutionary biology01 natural sciencesArticleFalco eleonoraesatellite telemetryddc:570Zoologiawintering groundsMadagascarAnimalsEcosystemZoología14. Life underwatereducationEcosystemEntire populationeducation.field_of_studyMultidisciplinaryGeographyRaptorsEcologybusiness.industryspecies distribution model010604 marine biology & hydrobiologyQRLong-distance15. Life on landBiodiversitatCurrent (stream)GeographyHabitatMigratory raptorMedicineWintering groundsAnimal MigrationSeasonsbusiness
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Evaluación del índice de pobreza hídrica (WPI) en la cuenca de Borujerd-Dorood (Irán) para reforzar los planes de gestión del territorio

2021

El Índice de Pobreza Hídrica (WPI) se considera, en general, una herramienta simple y clara para evaluar los efectos de factores combinados sobre la escasez de agua y la tensión de los recursos hídricos. En esta investigación, intentamos centrarnos en las problemáticas hídricas en las cabeceras de montaña de la cuenca de Karoon en Irán para analizar el estado de los recursos hídricos. Para este propósito, los datos requeridos se obtuvieron en primer lugar mediante la preparación de un informe de la Autoridad del Agua, la parte Agrícola y la Organización de Agua y Saneamiento del Condado de Borujerd. Luego, se estimó el valor del WPI a escala de subcuenca del río Karoon considerando como rec…

0106 biological sciencesResource (biology)Index (economics)WatershedEcologybusiness.industryÍndice de pobreza hídricaproblemática hídrica04 agricultural and veterinary sciences01 natural sciencesWater scarcity010601 ecologyWater resourcesHydrology (agriculture)GeographyAgriculture040103 agronomy & agriculturerecursos hídricos de montaña0401 agriculture forestry and fisheriesWater resource managementbusinesscuenca del río KaroonEcology Evolution Behavior and SystematicsEnvironmental qualityQH540-549.5Pirineos: Revista de Ecología de Montaña
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Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula

2004

To construct macro- and microarray tools suitable for expression profiling in root endosymbioses of the model legume Medicago truncatula, we PCR-amplified a total of 6048 cDNA probes representing genes expressed in uninfected roots, mycorrhizal roots and young root nodules [Nucleic Acids Res. 30 (2002) 5579]. Including additional probes for either tissue-specific or constitutively expressed control genes, 5651 successfully amplified gene-specific probes were used to grid macro- and to spot microarrays designated Mt6k-RIT (M. truncatula 6k root interaction transcriptome). Subsequent to a technical validation of microarray printing, we performed two pilot expression profiling experiments usin…

0106 biological sciencesRoot nodule[SDV]Life Sciences [q-bio]Plant Roots01 natural sciencesApplied Microbiology and BiotechnologyTranscriptomeADNCGene Expression Regulation PlantGene Expression Regulation FungalMycorrhizaeMedicagoPCR-basedComputingMilieux_MISCELLANEOUSOligonucleotide Array Sequence AnalysisPlant ProteinsExpressed Sequence Tags2. Zero hunger0303 health sciencesnodulin genesroot nodule symbiosisarbuscular mycorrhizafood and beveragesEquipment DesignGeneral MedicineMedicago truncatulaArbuscular mycorrhiza[SDV] Life Sciences [q-bio]expression profilingDNA microarrayBiotechnologyBioengineeringComputational biologyBiologySensitivity and Specificity03 medical and health sciencesComplementary DNABotanySymbiosisLeghemoglobin030304 developmental biologyGene Expression ProfilingfungiReproducibility of Resultsbiology.organism_classificationEquipment Failure AnalysisGene expression profilingphosphate transportercDNA array010606 plant biology & botany
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Regulation of reactive oxygen species production by a 14-3-3 protein in elicited tobacco cells.

2007

International audience; The regulation of the system responsible for the production of reactive oxygen species (ROS) during plant–microorganism interaction is still largely unknown. The protein NtrbohD has been recently demonstrated as the plasma membrane oxidase responsible for ROS production in elicited tobacco cells. Here, its C-terminus part was used as a bait in a two-hybrid screen in order to identify putative regulators of this system. This led to the isolation of a cDNA coding for a member of the 14-3-3 protein family. The corresponding transcript was induced after infiltration of tobacco leaves with the fungal elicitor cryptogein. Tobacco cells transformed with an antisense constru…

0106 biological sciencesSIGNALLINGDNA ComplementaryProtein familyPhysiologyMolecular Sequence DataContext (language use)Plant ScienceBiology01 natural sciences03 medical and health sciencesTwo-Hybrid System TechniquesTobaccoNADPH OXIDASEAmino Acid Sequence14-3-3 protein030304 developmental biologychemistry.chemical_classification[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesReactive oxygen speciesOxidase testCRYPTOGEINNADPH oxidaseSequence Homology Amino AcidElicitorchemistryBiochemistry14-3-3 ProteinsNAD(P)H oxidasebiology.proteinReactive Oxygen Species010606 plant biology & botanyPlant, cellenvironment
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Restoration of Abundance and Dynamics of Coastal Fish and Lobster Within Northern Marine Protected Areas Across Two Decades

2021

This article reviews a suite of studies conducted in a network of coastal Marine Protected Areas (MPAs) in Skagerrak, Southeast Norway. In 2006, Norway’s first lobster reserves were implemented, with the aim of protecting European lobster (Homarus gammarus) through a ban on fixed gear. A before–after control-impact paired series (BACIPS) monitoring program was initiated to evaluate effects of protection on depleted lobster populations. Experimental trapping and capture-recapture techniques were combined to track demography of populations, also including movement of individuals within and beyond MPAs and adjacent control areas. Further, population genetics and parentage studies were applied,…

0106 biological sciencesScienceCoastal fishOcean EngineeringCrustaceanAquatic ScienceQH1-199.5Oceanography010603 evolutionary biology01 natural sciencesHomarus gammarusFisheries managementVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 47014. Life underwaterSalmoWater Science and TechnologyGlobal and Planetary ChangeFish migrationbiology010604 marine biology & hydrobiologyMarine reserveQEco-evolutionary dynamicsGeneral. Including nature conservation geographical distributionMarine reserveRebuildingbiology.organism_classificationMonitoring programFisherySpilloverGeographyMarine protected areaAcoustic telemetryFisheries managementDisplacement of effort
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A Mediterranean Monk Seal Pup on the Apulia coast (Southern Italy): sign of an ongoing recolonisation?

2020

The Mediterranean monk seal (Monachus monachus) is one of the most endangered marine mammals in the world. This species has been threatened since ancient times by human activities and currently amounts to approximately 700 individuals distributed in the Eastern Mediterranean Sea (Aegean and Ionian Sea) and Eastern Atlantic Ocean (Cabo Blanco and Madeira). In other areas, where the species is considered “probably extinct”, an increase in sporadic sightings has been recorded during recent years. Sightings and accidental catches of Mediterranean monk seals have become more frequent in the Adriatic Sea, mainly in Croatia but also along the coasts of Montenegro, Albania and Southern Italy. A Med…

0106 biological sciencesSeal (emblem)Mediterranean climateAdriatic SeaEndangered speciesSettore BIO/05 - ZoologiaMonachus monachusmitochondrial DNA010603 evolutionary biology01 natural sciencesMediterranean monk sealMonachus monachuGreek islandMontenegrolcsh:QH301-705.5Nature and Landscape Conservation<i>Monachus monachus</i>Ecologybiology010604 marine biology & hydrobiologyEcological Modelingendangered speciesbiology.organism_classificationAgricultural and Biological Sciences (miscellaneous)FisheryGeographylcsh:Biology (General)Threatened speciesIonian island
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Ocean acidification does not impair predator recognition but increases juvenile growth in a temperate wrasse off CO2seeps

2017

8 pages, 4 figures, supplementary data https://doi.org/10.1016/j.marenvres.2017.10.013

0106 biological sciencesSettore BIO/07 - EcologiaCO2 ventsCO2ventEffects-fishAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesPredationStress PhysiologicalmedicineMediterranean SeaJuvenileSeawaterPerciformePredatorGlobal changeOtolithRisk assessmentSymphodus ocellatusSettlementbiologyEcologypHAnimalSymphodus ocellatus010604 marine biology & hydrobiologyOcean acidificationGeneral MedicineJuvenile fishCarbon DioxideHydrogen-Ion Concentrationbiology.organism_classificationPollutionmedicine.anatomical_structureCarbon dioxideWrassePredatory BehaviorSymphodus ocellatuEnvironmental Monitoring
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