Search results for "LIES"

showing 10 items of 1093 documents

Rare-earth elements and yttrium distributions in mangrove coastal water systems: The western Gulf of Thailand

2005

The concentration of rare-earth elements and yttrium (REY) was investigated in dissolved phase, suspended particulate matter, and seafloor sediments of the western coastal area of the Gulf of Thailand. The samples show Eu and Gd positive anomalies in the shale-normalized REY patterns, especially in the suspended particulate matter. On the other hand, a very high REE content was detected in the coastal waters, probably due to the weathering produced by the Mae Klong river waters on rare-earth element (REE)-rich accessory minerals coming from terrains and mineral deposits cropping out in the studied area. The shale-normalized patterns of yttrium and REE estimated for the dissolved phase show …

MineralEcologySettore BIO/02 - Botanica SistematicaRare earthGeochemistrychemistry.chemical_elementSedimentWeatheringYttriumParticulatesRare-earth elements Gulf of Thailand Eu and Gd anomaliesSeafloor spreadingOceanographychemistryGeneral Earth and Planetary SciencesMangroveEcology Evolution Behavior and SystematicsGeologyGeneral Environmental ScienceChemistry and Ecology
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Retinal straylight in patients with monofocal and multifocal intraocular lenses

2007

Purpose To determine the differences in retinal straylight perceived by patients with monofocal intraocular lenses (IOLs) and patients with multifocal IOLs. Setting Vissum-Instituto de Oftalmologico de Alicante, Alicante, Spain. Methods In this prospective study, contrast sensitivity and retinal straylight were measured prospectively 6 months postoperatively in 67 eyes of 40 patients with a monofocal or multifocal IOL. In the monofocal group, a ThinOptX IOL (ThinOptX, Inc.) was implanted in 12 eyes and an Acri.Smart 48 S IOL (Acri.Tec) in 20 eyes. In the multifocal IOL group, a ReZoom IOL (Advanced Medical Optics) was implanted in 13 eyes and a ReSTOR IOL (Alcon Laboratories) in 22 eyes. Re…

Miosismedicine.medical_specialtyLightPseudophakiagenetic structuresmedicine.medical_treatmentmedia_common.quotation_subjectIntraocular lensRetinaPupilGlareContrast Sensitivitychemistry.chemical_compoundLens Implantation IntraocularOphthalmologymedicineHumansScattering RadiationContrast (vision)Prospective StudiesAgedmedia_commonAged 80 and overLenses IntraocularPhacoemulsificationbusiness.industryGlare (vision)RetinalPhacoemulsificationMiddle AgedMultifocal intraocular lensequipment and supplieseye diseasesSensory SystemsOphthalmologychemistryOptometrySurgerysense organsmedicine.symptombusinessJournal of Cataract and Refractive Surgery
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Metallothionein Gene Family in the Sea Urchin Paracentrotus lividus: Gene Structure, Differential Expression and Phylogenetic Analysis

2017

Metallothioneins (MT) are small and cysteine-rich proteins that bind metal ions such as zinc, copper, cadmium, and nickel. In order to shed some light on MT gene structure and evolution, we cloned seven Paracentrotus lividus MT genes, comparing them to Echinodermata and Chordata genes. Moreover, we performed a phylogenetic analysis of 32 MTs from different classes of echinoderms and 13 MTs from the most ancient chordates, highlighting the relationships between them. Since MTs have multiple roles in the cells, we performed RT-qPCR and in situ hybridization experiments to understand better MT functions in sea urchin embryos. Results showed that the expression of MTs is regulated throughout de…

Models Molecular0301 basic medicineProtein Conformationmetallothionein; multigene families; evolution; metal; echinoderms; embryonic development; gene expressionCatalysiGene OrderMetallothioneinSea urchinPhylogenySpectroscopyPhylogenetic treebiologyEchinodermMetalGene Expression Regulation DevelopmentalComputer Science Applications1707 Computer Vision and Pattern RecognitionExonsGeneral MedicineAnatomyMultigene familiemultigene familiesComputer Science ApplicationsCell biologymedicine.anatomical_structureMetalsMultigene FamilyParacentrotusEchinoderms; Embryonic development; Evolution; Gene expression; Metal; Metallothionein; Multigene families; Catalysis; Molecular Biology; Computer Science Applications1707 Computer Vision and Pattern Recognition; Spectroscopy; Physical and Theoretical Chemistry; Organic Chemistry; Inorganic ChemistryMesenchymeSettore BIO/11 - Biologia MolecolareIn situ hybridizationArticleCatalysisParacentrotus lividusInorganic Chemistry03 medical and health sciencesbiology.animalevolutionmedicineAnimalsGene familyProtein Interaction Domains and MotifsAmino Acid SequencePhysical and Theoretical ChemistryGeneMolecular BiologydevelopmentechinodermsOrganic Chemistrybiology.organism_classificationmetallothioneinAlternative Splicing030104 developmental biologyGene Expression RegulationEmbryonic developmentgene expression
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Origins of fluorescence in evolved bacteriophytochromes

2014

Use of fluorescent proteins to study in vivo processes in mammals requires near-infrared (NIR) biomarkers that exploit the ability of light in this range to penetrate tissue. Bacteriophytochromes (BphPs) are photoreceptors that couple absorbance of NIR light to photoisomerization, protein conformational changes, and signal transduction. BphPs have been engineered to form NIR fluorophores, including IFP1.4, Wi-Phy, and the iRFP series, initially by replacement of Asp-207 by His. This position was suggestive because its main chain carbonyl is within hydrogen-bonding distance to pyrrole ring nitrogens of the biliverdin chromophore, thus potentially functioning as a crucial transient proton sin…

Models MolecularPhotoisomerizationNitrogenSurface PropertiesQuantum yieldCrystallography X-RayLigandsProtein EngineeringPhotochemistryBiochemistrychemistry.chemical_compoundparasitic diseasesSide chainAnimalsCloning MolecularneoplasmsMolecular BiologySpectroscopy Near-InfraredBiliverdinBacteriaPhytochromeChemistryBiliverdinetechnology industry and agricultureta1182WaterHydrogen BondingCell BiologyChromophoreequipment and suppliesFluorescenceProtein Structure Tertiarysurgical procedures operativeSpectrometry FluorescenceStructural biologySpectrophotometryProtein Structure and FoldingPhytochromeHydrophobic and Hydrophilic InteractionsBiomarkersProtein BindingJournal of Biological Chemistry
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Promiscuity in alkaline phosphatase superfamily. Unraveling evolution through molecular simulations.

2011

We here present a theoretical study of the alkaline hydrolysis of a phosphodiester (methyl p-nitrophenyl phosphate or MpNPP) in the active site of Escherichia coli alkaline phosphatase (AP), a monoesterase that also presents promiscuous activity as a diesterase. The analysis of our simulations, carried out by means of molecular dynamics (MD) simulations with hybrid quantum mechanics/molecular mechanics (QM/MM) potentials, shows that the reaction takes place through a D(N)A(N) or dissociative mechanism, the same mechanism employed by AP in the hydrolysis of monoesters. The promiscuous activity observed in this superfamily can be then explained on the basis of a conserved reaction mechanism. …

Models MolecularReaction mechanismStereochemistrydnaNAlkaline hydrolysis (body disposal)AlkaliesMolecular Dynamics SimulationBiochemistryMolecular mechanicsCatalysisMolecular dynamicsColloid and Surface ChemistryCatalytic DomainphosphodiesterEscherichia colibiologyChemistryHydrolysisActive siteGeneral ChemistryAlkaline PhosphataseEnzymesEnzyme ActivationPhosphodiester bondbiology.proteinAlkaline phosphataseQuantum Theoryalkaline phosphataseJournal of the American Chemical Society
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Alkali metal mediated resorcarene capsules: An ESI-FTICRMS study on gas-phase structure and cation binding of tetraethyl resorcarene and its per-meth…

2002

AbstractElectrospray ionization Fourier transform ion cyclotron resonance mass spectrometry (ESI-FTICRMS) with additional ab initio calculations were used to examine the alkali metal cation binding selectivity (i.e., molecular recognition) and host properties of tetraethyl resorcarene (1) and its per-methylated derivative (2). The significance of intramolecular hydrogen bonding for the crown conformation was demonstrated. The presence of intramolecular flip-flop hydrogen bonding in 1 was confirmed both with calculations and in ND3-exchange experiments. All the alkali metal cations formed host–guest complexes by docking inside the cavity of the host. Complexation with the larger cations, esp…

Models MolecularSpectrometry Mass Electrospray IonizationCation bindingFourier AnalysisHydrogen bondChemistryStereochemistryElectrospray ionizationMolecular ConformationHydrogen BondingAlkaliesIon cyclotron resonance spectrometryMethylationFourier transform ion cyclotron resonanceMolecular recognitionMetalsStructural BiologyIntramolecular forcePolymer chemistryMoleculePolycyclic CompoundsSpectroscopyJournal of the American Society for Mass Spectrometry
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Structure of the altitude adapted hemoglobin of Guinea pig in the R2-state

2010

Background: Guinea pigs are considered to be genetically adapted to a high altitude environment based on the consistent finding of a high oxygen affinity of their blood. Methodology/Principal Findings: The crystal structure of guinea pig hemoglobin at 1.8 A u resolution suggests that the increased oxygen affinity of guinea pig hemoglobin can be explained by two factors, namely a decreased stability of the Tstate and an increased stability of the R2-state. The destabilization of the T-state can be related to the substitution of a highly conserved proline (P44) to histidine (H44) in the a-subunit, which causes a steric hindrance with H97 of the b-subunit in the switch region. The stabilizatio…

Models MolecularSteric effectsGuinea PigsBiophysicslcsh:Medicinechemistry.chemical_elementCrystallography X-RayBiochemistryOxygen570 Life sciencesGuinea pigHemoglobinsAltitudeBiophysics/Macromolecular Assemblies and MachinesAnimalsProlineProtein Structure Quaternarylcsh:ScienceHistidineMultidisciplinaryProtein StabilityAltitudelcsh:ROxygen transportAdaptation PhysiologicalBiochemistry/Molecular EvolutionBiochemistry/Macromolecular Assemblies and MachinesBiochemistrychemistryBiophysicsPhysiology/Respiratory Physiologylcsh:QHemoglobinResearch Article570 Biowissenschaften
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Investigation of tooth transposition in a non-syndromic Turkish anatolian population : characteristic features and associated dental anomalies

2009

Objective: The aims of this study were to investigate the frequency and characteristics of dental transpositions and to evaluate associated dental anomalies in a large sample of Turkish Anatolian population. Study design: A retrospective study was performed using panoramic radiographs of 6983 patients (4092 females and 2891 males) ranging in age from 12 to 27 subjected to Faculty of Dentistry at the University of Ataturk (Erzurum, Turkey) between 2005 and 2008. For each patient with tooth transposition we recorded the demographic variables (including age, sex), history of trauma, type, classification, and location of tooth transpositions, and associated dental anomalies. The Pearson chi-squ…

MolarAdultMaleAdolescentTurkeyTurkishPopulationDentistryTransposition (music)Young AdultIncisorstomatognathic systemMedicineHumanseducationChildGeneral DentistryRetrospective StudiesOrthodonticsDental anomalieseducation.field_of_studybusiness.industryTooth Abnormalities:CIENCIAS MÉDICAS [UNESCO]language.human_languagestomatognathic diseasesmedicine.anatomical_structureOtorhinolaryngologyUNESCO::CIENCIAS MÉDICASlanguageSurgeryFemalebusinessTooth transpositionNon syndromic
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Repercussions of intraalveolar placement of combination of 0.2% chlorhexidine & 10 Mg metronidazole gel on the occurrence of dry sockets- A randomize…

2017

BACKGROUND To evaluate the effects of intraalveolar placement of gel containing 0.2% chlorhexidine and 10gm of metronidazole on the incidence of alveolar osteitis. MATERIAL AND METHODS A total of 300 impacted third molars were extracted in 150 patients enrolled in this trial. In each subject a socket was randomly selected and packed to the crest of alveolar ridge with the gel. The contralateral socket was packed with placebo dressing. The occurrence of dry socket was assessed during 3rd and 5th postoperative days .The data was analysed using a meta analytical program. STUDY DESIGN Double blind, prospective, placebo controlled trial. RESULTS The combination of metronidazole + chlorhexidine g…

Molarmedicine.medical_specialtyPlacebo-controlled studyDentistryOdontologíaPlacebolaw.invention03 medical and health sciences0302 clinical medicineRandomized controlled triallawmedicineAlveolar ridgeGeneral Dentistrybusiness.industryResearchChlorhexidine030206 dentistrymedicine.disease:CIENCIAS MÉDICAS [UNESCO]equipment and suppliesCiencias de la saludSurgerybody regionsDry socketMetronidazole030220 oncology & carcinogenesisUNESCO::CIENCIAS MÉDICASOral Surgerybusinessmedicine.drug
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Emissions and spatial variability of N2O, N2 and nitrous oxide mole fraction at the field scale, revealed with 15N isotopic techniques.

2006

Abstract The accurate measurement of nitrous oxide (N 2 O) and dinitrogen (N 2 ) during the denitrification process in soils is a challenge which will help to estimate the contribution of soil N 2 O emissions to global warming. Oxygen concentration, nitrate concentration and carbon availability are generally the main factors that control soil denitrification rate and the amount of N 2 O or N 2 emitted. The aim of this paper is to present a database of the N 2 O mole fraction measured at the field scale, and to test hypotheses concerning its regulation. A 15 N-nitrate tracer solution was added to 36 undisturbed soil cores on a 20 m×20 m cultivated field plot. Fluxes of CO 2 , N 2 O and N 2 f…

Mole fractionDenitrificationDinitrogen[SDE.MCG]Environmental Sciences/Global ChangesSoil Sciencechemistry.chemical_elementMole fractionMicrobiologySpatial variabilitychemistry.chemical_compoundNitrate[SDU.STU.GC]Sciences of the Universe [physics]/Earth Sciences/Geochemistry[ SDU.ENVI ] Sciences of the Universe [physics]/Continental interfaces environment[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces environmentWater contentSpatial dependenceNitrous oxideEcology15NNitrous oxide[ SDU.STU.GC ] Sciences of the Universe [physics]/Earth Sciences/Geochemistryequipment and suppliesNitrogen[ SDE.MCG ] Environmental Sciences/Global ChangeschemistryEnvironmental chemistrySoil waterDenitrificationLimiting oxygen concentration
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