Search results for "LIPIDS"

showing 10 items of 2228 documents

Cyclopropanation of Membrane Unsaturated Fatty Acids Is Not Essential to the Acid Stress Response of Lactococcus lactis subsp. cremoris

2011

ABSTRACT Cyclopropane fatty acids (CFAs) are synthetized in situ by the transfer of a methylene group from S -adenosyl- l -methionine to a double bond of unsaturated fatty acid chains of membrane phospholipids. This conversion, catalyzed by the Cfa synthase enzyme, occurs in many bacteria and is recognized to play a key role in the adaptation of bacteria in response to a drastic perturbation of the environment. The role of CFAs in the acid tolerance response was investigated in the lactic acid bacterium Lactococcus lactis MG1363. A mutant of the cfa gene was constructed by allelic exchange. The cfa gene encoding the Cfa synthase was cloned and introduced into the mutant to obtain the comple…

CyclopropanesPhysiologyMembrane lipidsMutantApplied Microbiology and BiotechnologyGas Chromatography-Mass SpectrometryMembrane LipidsStress PhysiologicalMembrane fluidityViability assayPhospholipidsUnsaturated fatty acidMicrobial ViabilityEcologybiologyLactococcus lactis subsp cremorisFatty AcidsGenetic Complementation TestLactococcus lactisMethyltransferasesbiology.organism_classificationLactococcus lactisBiochemistryFatty Acids UnsaturatedMutant ProteinsAcidsBacteriaFood ScienceBiotechnologyApplied and Environmental Microbiology
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Contribution of Molecular Structure to Self-Assembling and Biological Properties of Bifunctional Lipid-Like 4-(N-Alkylpyridinium)-1,4-Dihydropyridines

2019

The design of nanoparticle delivery materials possessing biological activities is an attractive strategy for the development of various therapies. In this study, 11 cationic amphiphilic 4-(N-alkylpyridinium)-1,4-dihydropyridine (1,4-DHP) derivatives differing in alkyl chain length and propargyl moiety/ties number and position were selected for the study of their self-assembling properties, evaluation of their cytotoxicity in vitro and toxicity on microorganisms, and the characterisation of their interaction with phospholipids. These lipid-like 1,4-DHPs have been earlier proposed as promising nanocarriers for DNA delivery. We have revealed that the mean diameter of freshly prepared nanoparti…

CytotoxicityDLStoxicity on microorganismsPharmaceutical ScienceNanoparticlelcsh:RS1-44102 engineering and technologySynthetic lipids010402 general chemistry01 natural sciencesHydrophobic effectToxicity on microorganismslcsh:Pharmacy and materia medicaself-assembling propertieschemistry.chemical_compoundPhospholipid bindingAmphiphilePolymer chemistrysynthetic lipids:NATURAL SCIENCES:Physics [Research Subject Categories]pyridinium and propargyl moietiesMoietyBifunctionalAlkylSelf-assembling propertieschemistry.chemical_classification021001 nanoscience & nanotechnology3. Good health0104 chemical sciencesphospholipid bindingchemistryPropargylTEMNanoparticlescytotoxicitynanoparticlesPyridinium0210 nano-technologyPyridinium and propargyl moietiesPharmaceutics
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The Diapause Lipidomes of Three Closely Related Beetle Species Reveal Mechanisms for Tolerating Energetic and Cold Stress in High-Latitude Seasonal E…

2020

During winter insects face energetic stress driven by lack of food, and thermal stress due to sub-optimal and even lethal temperatures. To survive, most insects living in seasonal environments such as high latitudes, enter diapause, a deep resting stage characterized by a cessation of development, metabolic suppression and increased stress tolerance. The current study explores physiological adaptations related to diapause in three beetle species at high latitudes in Europe. From an ecological perspective, the comparison is interesting since one species (Leptinotarsa decemlineata) is an invasive pest that has recently expanded its range into northern Europe, where a retardation in range expa…

DECEMLINEATA SAY COLEOPTERAabiotic stressPhysiologyLEPTINOTARSA-DECEMLINEATAlehtikuoriaisetRANGE EXPANSIONlipiditekofysiologiaECOPHYSIOLOGICAL PHASEStalvehtimineninvasive specieskylmänkestävyystuhohyönteisetvieraslajitrange expansionlepotilaOriginal ResearchMEMBRANE-LIPIDSkoloradonkuoriainen1184 Genetics developmental biology physiologyBIOLOGICAL-MEMBRANESHOMEOVISCOUS ADAPTATIONclimate changeMETABOLIC-RATEpest insecthyönteisetCOLORADO POTATO BEETLEleviäminenDISCONTINUOUS GAS-EXCHANGE
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Potential use of HMG-CoA reductase inhibitors (statins) as radioprotective agents

2011

HMG-CoA reductase inhibitors (statins) are widely used in the therapy of hypercholesterolemia. Apart from their lipid-lowering activity, they have pleiotropic effects that are attributed to the inhibition of regulatory proteins, including Ras-homologous (Rho) GTPases. Here, we discuss the potential usefulness of statins to prevent normal tissue damage provoked by radiotherapy. Statins reduce the mRNA expression of pro-inflammatory and pro-fibrotic cytokines stimulated by ionizing radiation in vitro and alleviate IR-induced inflammation and fibrosis in vivo. The currently available data indicate that statins accelerate the rapid repair of DNA double-strand breaks and, moreover, mitigate the …

DNA RepairRadiotherapybiologyRadioprotective AgentDNA repairDNA damagemedicine.medical_treatmentnutritional and metabolic diseasesRadiation-Protective AgentsInflammationGeneral MedicinePharmacologyReductaseCytokineBiochemistryIn vivoHMG-CoA reductasebiology.proteinmedicineHumanslipids (amino acids peptides and proteins)Hydroxymethylglutaryl-CoA Reductase Inhibitorsmedicine.symptomRadiation InjuriesDNA DamageBritish Medical Bulletin
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Lovastatin protects human endothelial cells from the genotoxic and cytotoxic effects of the anticancer drugs doxorubicin and etoposide

2006

Background and purpose: 3-Hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) reductase inhibitors (statins) are frequently used lipid-lowering drugs. Moreover, they exert pleiotropic effects on cellular stress responses and death. Here, we analysed whether lovastatin affects the sensitivity of primary human endothelial cells (HUVEC) to the anticancer drug doxorubicin. Experimental approach: We investigated whether pretreatment of HUVEC with low dose of lovastatin influences the cellular sensitivity to doxorubicin. To this end, cell viability, proliferation and apoptosis as well as DNA damage-triggered stress response were analysed. Key results: Lovastatin reduced the cytotoxic potency of doxorub…

DNA ReplicationCell SurvivalDNA damageApoptosisBiologyPharmacologypolycyclic compoundsmedicineHumansTopoisomerase II InhibitorsDoxorubicinLovastatinEtoposideEtoposideFluorescent DyesPharmacologyAntibiotics AntineoplasticReverse Transcriptase Polymerase Chain ReactionTopoisomeraseCell CycleEndothelial Cellsnutritional and metabolic diseasesAntimutagenic AgentsFibroblastsCell cycleResearch PapersAntineoplastic Agents PhytogenicDoxorubicinDrug Resistance NeoplasmHMG-CoA reductasebiology.proteinlipids (amino acids peptides and proteins)LovastatinHydroxymethylglutaryl-CoA Reductase InhibitorsTopoisomerase-II InhibitorReactive Oxygen SpeciesFluorescein-5-isothiocyanateDNA Damagemedicine.drugBritish Journal of Pharmacology
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Pseudomonas litolaris sp. nov., isolated from mediterranean seawater

2012

Strains 2SM5T and 2SM6, two strictly aerobic chemo-organotrophic gammaproteobacteria, were isolated from Mediterranean seawater off the coast of Vinaroz, Castellón, Spain, in February, 1990. They were extensively characterized by a polyphasic study that placed them in the genus Pseudomonas. Phylogenetic analysis of 16S rRNA gene sequences showed that both strains shared 100 % sequence similarity and were closely related to members of the Pseudomonas pertucinogena clade, with less than 97.3 % similarity to strains of established species; Pseudomonas xiamenensis was the closest relative. Analysis of sequences of three housekeeping genes, rpoB, rpoD and gyrB, further confirmed the phylogenetic…

DNA BacterialGenotypeMolecular Sequence DataBiologyDNA RibosomalMicrobiologyPseudomonas pertucinogenaBacterial ProteinsSpecies SpecificityPseudomonasRNA Ribosomal 16SGammaproteobacteriaBotanySeawaterCladePhylogenyEcology Evolution Behavior and SystematicsBase CompositionPhylogenetic treeMediterranean RegionFatty AcidsPseudomonasQuinonesGenes rRNASequence Analysis DNAGeneral MedicinerpoB16S ribosomal RNAbiology.organism_classificationLipidsBacterial Typing TechniquesHousekeeping genePhenotypeSpain
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Sphingobium aromaticiconvertens sp. nov., a xenobiotic-compound-degrading bacterium from polluted river sediment.

2007

A bacterial strain capable of degrading some monochlorinated dibenzofurans, designated RW16T, was isolated from aerobic River Elbe sediments. The strain was characterized based on 16S rRNA gene sequence analysis, DNA G+C content, physiological characteristics, polyamines, ubiquinone and polar lipid pattern and fatty acid composition. This analysis revealed that strain RW16T represents a novel species of the genus Sphingobium. The DNA G+C content of strain RW16T, 60.7 mol%, is the lowest yet reported for the genus. 16S rRNA gene sequence analysis placed strain RW16T as an outlier in the genus Sphingobium. The name Sphingobium aromaticiconvertens sp. nov. is proposed for this dibenzofuran-min…

DNA BacterialGeologic SedimentsMolecular Sequence DataMicrobiologyDNA RibosomalMicrobiologychemistry.chemical_compoundRiversGermanyRNA Ribosomal 16SSequence Homology Nucleic AcidSphingobium aromaticiconvertensPolyaminesWater Pollution ChemicalEcology Evolution Behavior and SystematicsPhospholipidsPhylogenyBenzofuransBase CompositionRiver sedimentbiologyEcologyFatty AcidsQuinonesGenes rRNAGeneral MedicineSequence Analysis DNABiodegradationDibenzofurans Polychlorinated16S ribosomal RNAbiology.organism_classificationBacterial Typing TechniquesSphingomonadaceaeRNA BacterialchemistryCarbohydrate MetabolismXenobioticGenus SphingobiumDNABacteriaInternational journal of systematic and evolutionary microbiology
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Neptuniibacter caesariensis gen. nov., sp. nov., a novel marine genome-sequenced gammaproteobacterium.

2007

7 pages, 1 figure, 1 table

DNA BacterialOceanospirillaceaeSequence analysisMovementMolecular Sequence DataCarboxylic AcidsZoologyAlteromonadaceaeMicrobiologyDNA RibosomalMicrobiologyMembrane LipidsPhylogeneticsRNA Ribosomal 16SSequence Homology Nucleic AcidMediterranean SeaSeawaterAmino AcidsEcology Evolution Behavior and SystematicsPhylogenyBase CompositionbiologyPhylogenetic treeAlteromonadaceaeFatty AcidsGenes rRNAGeneral MedicineSequence Analysis DNARibosomal RNAbiology.organism_classification16S ribosomal RNAHalophileBacterial Typing TechniquesRNA BacterialOceanospirillaceaeGammaproteobacteriaGenome BacterialInternational journal of systematic and evolutionary microbiology
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Inverse Conformational Selection in Lipid–Protein Binding

2021

International audience; Interest in lipid interactions with proteins and other biomolecules is emerging not only in fundamental biochemistry but also in the field of nanobiotechnology where lipids are commonly used, for example, in carriers of mRNA vaccines. The outward-facing components of cellular membranes and lipid nanoparticles, the lipid headgroups, regulate membrane interactions with approaching substances, such as proteins, drugs, RNA, or viruses. Because lipid headgroup conformational ensembles have not been experimentally determined in physiologically relevant conditions, an essential question about their interactions with other biomolecules remains unanswered: Do headgroups excha…

DYNAMICSELECTRIC CHARGEBILAYERSPHOSPHATIDYLCHOLINE HEADGROUPMembrane lipidsDEUTERIUMPlasma protein bindingMolecular Dynamics Simulationlipidit010402 general chemistry01 natural sciencesBiochemistrybiomolekyylitCatalysis03 medical and health sciencesMolecular dynamicskemialliset sidoksetColloid and Surface ChemistryProtein structurePHOSPHOLIPID-BINDINGMAGNETIC-RESONANCE[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologySEGMENTAL ORDER[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyConformational ensemblesNuclear Magnetic Resonance Biomolecular030304 developmental biologychemistry.chemical_classification0303 health sciencesChemistryBiomoleculeMEMBRANE-LIPIDSProteinsPhosphatidylglycerolsGeneral Chemistrycomputer.file_formatProtein Data BankLipids0104 chemical sciencesBiophysicsPhospholipid BindingPhosphatidylcholinesMAS NMR1182 Biochemistry cell and molecular biologylipids (amino acids peptides and proteins)proteiinitcomputerProtein Binding
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Analysis of Lipid Experiments (ALEX): A Software Framework for Analysis of High-Resolution Shotgun Lipidomics Data

2013

Global lipidomics analysis across large sample sizes produces high-content datasets that require dedicated software tools supporting lipid identification and quantification, efficient data management and lipidome visualization. Here we present a novel software-based platform for streamlined data processing, management and visualization of shotgun lipidomics data acquired using high-resolution Orbitrap mass spectrometry. The platform features the ALEX framework designed for automated identification and export of lipid species intensity directly from proprietary mass spectral data files, and an auxiliary workflow using database exploration tools for integration of sample information, computat…

Databases FactualComputer scienceData managementlcsh:MedicineBioinformaticscomputer.software_genreMass spectrometryMiceUser-Computer InterfaceData visualizationLipidomicsAnimalslcsh:ScienceInternetMultidisciplinarybusiness.industrylcsh:RBrainLipid-phosphate phosphataseShotgun lipidomicsLipidomeLipidsVisualizationSoftware frameworkKnockout mouselcsh:QData miningbusinesscomputerSoftwareResearch ArticlePLoS ONE
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