Search results for "Leghemoglobin"

showing 4 items of 4 documents

Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula

2004

To construct macro- and microarray tools suitable for expression profiling in root endosymbioses of the model legume Medicago truncatula, we PCR-amplified a total of 6048 cDNA probes representing genes expressed in uninfected roots, mycorrhizal roots and young root nodules [Nucleic Acids Res. 30 (2002) 5579]. Including additional probes for either tissue-specific or constitutively expressed control genes, 5651 successfully amplified gene-specific probes were used to grid macro- and to spot microarrays designated Mt6k-RIT (M. truncatula 6k root interaction transcriptome). Subsequent to a technical validation of microarray printing, we performed two pilot expression profiling experiments usin…

0106 biological sciencesRoot nodule[SDV]Life Sciences [q-bio]Plant Roots01 natural sciencesApplied Microbiology and BiotechnologyTranscriptomeADNCGene Expression Regulation PlantGene Expression Regulation FungalMycorrhizaeMedicagoPCR-basedComputingMilieux_MISCELLANEOUSOligonucleotide Array Sequence AnalysisPlant ProteinsExpressed Sequence Tags2. Zero hunger0303 health sciencesnodulin genesroot nodule symbiosisarbuscular mycorrhizafood and beveragesEquipment DesignGeneral MedicineMedicago truncatulaArbuscular mycorrhiza[SDV] Life Sciences [q-bio]expression profilingDNA microarrayBiotechnologyBioengineeringComputational biologyBiologySensitivity and Specificity03 medical and health sciencesComplementary DNABotanySymbiosisLeghemoglobin030304 developmental biologyGene Expression ProfilingfungiReproducibility of Resultsbiology.organism_classificationEquipment Failure AnalysisGene expression profilingphosphate transportercDNA array010606 plant biology & botany
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Proteome analysis and identification of symbiosis-related proteins from Medicago truncatula Gaertn. by two-dimensional electrophoresis and mass spect…

2002

Time-course analysis of root protein profiles was studied by two-dimensional gel electrophoresis and silver staining in the model plant Medicago truncatula, inoculated either with the arbuscular mycorrhizal fungus Glomus mosseae or with the nitrogen fixing bacterium Sinorhizobium meliloti. Protein modifications in relation to the development of both symbioses included down- and upregulations, as well as newly induced polypeptides. Matrix assisted laser desorption/ionization-time of flight-mass spectrometry after trypsin digestion clearly identified one polypeptide induced in nodulated roots as a M. truncatula leghemoglobin. Internal sequencing with a quadrupole time-of-flight mass spectrome…

Proteome[SDV]Life Sciences [q-bio]Clinical BiochemistryMass spectrometryBiochemistryMass SpectrometryAnalytical ChemistryGene Expression Regulation PlantBotanyMedicagoElectrophoresis Gel Two-DimensionalLeghemoglobinSymbiosisGlomusComputingMilieux_MISCELLANEOUSPlant ProteinsGel electrophoresisSinorhizobium melilotibiologyfungiFungifood and beveragesbiology.organism_classificationMedicago truncatula[SDV] Life Sciences [q-bio]BiochemistrySerine hydroxymethyltransferaseProteomeSinorhizobium melilotiElectrophoresis
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Heme symmetry, vibronic structure, and dynamics in heme proteins: ferrous nicotinate horse myoglobin and soybean leghemoglobin.

2000

We report the visible and Soret absorption bands, down to cryogenic temperatures, of the ferrous nicotinate adducts of native and deuteroheme reconstituted horse heart myoglobin in comparison with soybean leghemoglobin-a. The band profile in the visible region is analyzed in terms of vibronic coupling of the heme normal modes to the electronic transition in the framework of the Herzberg–Teller approximation. This theoretical approach makes use of the crude Born–Oppenheimer states and therefore neglects the mixing between electronic and vibrational coordinates; however, it takes into account the vibronic nature of the visible absorption bands and allows an estimate of the vibronic side bands…

HemeproteinsHemeproteinBiophysicsHemePhotochemistryBiochemistryVibrationMolecular electronic transitionSpectral lineBiomaterialschemistry.chemical_compoundAnimalsFerrous CompoundsHorsesHemeMyoglobinProtein dynamicsOrganic ChemistryNicotinic AcidsTemperatureGeneral MedicineProtein Structure TertiaryLeghemoglobinVibronic couplingMyoglobinchemistrySpectrophotometryMolecular vibrationSoybeansBiopolymers
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Ammonium acts systemically while nitrate exerts an additional local effect on Medicago truncatula nodules

2020

National audience; Symbiotic nitrogen fixation (SNF) has a high energetic cost for legume plants; legumes thus reduce SNF when soil N is available. The present study aimed to increase our understanding regarding the impacts of the two principal forms of available N in soils (ammonium and nitrate) on SNF. We continuously measured the SNF of Medicago truncatula under controlled conditions. This permitted nodule sampling for comparative transcriptome profiling at points connected to the nodules' reaction following ammonium or nitrate applications. The N component of both ions systemically induced a rhythmic pattern of SNF, while the activity in control plants remained constant. This rhythmic a…

0106 biological sciences0301 basic medicinePlant Sciencenodule activity01 natural sciencesNicotianamine synthaseTranscriptome03 medical and health scienceschemistry.chemical_compoundNitratenitrateRNA seqAmmonium CompoundsMedicago truncatulaGeneticsAmmoniumLeghemoglobinSymbiosisLegumeNitratesbiologyNCR peptidesfungiGeneral MedicineneNASbiology.organism_classificationMedicago truncatula030104 developmental biologychemistryBiochemistrynitrogen fixation[SDE]Environmental SciencesNitrogen fixationbiology.proteinRoot Nodules PlantAgronomy and Crop Science010606 plant biology & botany
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