Search results for "Linea"
showing 10 items of 7724 documents
X Chromosome Contribution to the Genetic Architecture of Primary Biliary Cholangitis
2021
Background & aims: Genome-wide association studies in primary biliary cholangitis (PBC) have failed to find X chromosome (chrX) variants associated with the disease. Here, we specifically explore the chrX contribution to PBC, a sexually dimorphic complex autoimmune disease. Methods: We performed a chrX-wide association study, including genotype data from 5 genome-wide association studies (from Italy, United Kingdom, Canada, China, and Japan; 5244 case patients and 11,875 control individuals). Results: Single-marker association analyses found approximately 100 loci displaying P < 5 × 10-4, with the most significant being a signal within the OTUD5 gene (rs3027490; P = 4.80 × 10-6; odds…
Definitive evidence for Club cells as progenitors for mutantKras/Trp53‐deficient lung cancer
2021
Accumulating evidence suggests that both the nature of oncogenic lesions and the cell-of-origin can strongly influence cancer histopathology, tumor aggressiveness and response to therapy. Although oncogenic Kras expression and loss of Trp53 tumor suppressor gene function have been demonstrated to initiate murine lung adenocarcinomas (LUADs) in alveolar type II (AT2) cells, clear evidence that Club cells, representing the second major subset of lung epithelial cells, can also act as cells-of-origin for LUAD is lacking. Equally, the exact anatomic location of Club cells that are susceptible to Kras transformation and the resulting tumor histotype remains to be established. Here, we provide de…
Role of the Ha-ras gene in the malignant transformation of rat liver oval cells.
1997
We have shown that the oval cell line OCICDE 22 can be transformed by the highly carcinogenic fiord-region diol epoxides of benzo[c]phenanthrene. Mutational activation of the ras proto-oncogene family has been proposed to be a critical event in the formation of tumors induced by polycyclic aromatic hydrocarbons. Therefore, we investigated whether in the earlier transformed OCICDE 22 cells any point mutations were detected in the ras proto-oncogene. The results indicate that the malignant transformation of OCICDE 22 cells by the 4 stereoisomeric benzo[c]phenan-threne diol epoxides in vitro is independent of activation of the Ha-ras proto-oncogene. In addition, Northern and Western blot analy…
Accurate classification of childhood brain tumours by in vivo H-1 MRS - A multi-centre study
2013
Aims: To evaluate the accuracy of single-voxel Magnetic Resonance Spectroscopy (1H-MRS) as a non-invasive diagnostic aid for pediatric brain tumours in a multi-national study. Our hypotheses are (1) that automated classification based on 1H-MRS provides an accurate non-invasive diagnosis in multi-centre datasets and (2) using a protocol which increases the metabolite information improves the diagnostic accuracy. Methods: 78 patients under 16 years old with histologically proven brain tumours from 10 international centres were investigated. Discrimination of 29 medulloblastomas, 11 ependymomas and 38 pilocytic astrocytomas was evaluated. Single-voxel MRS was undertaken prior to diagnosis (1.…
A Review of Mathematical and Computational Methods in Cancer Dynamics.
2022
Cancers are complex adaptive diseases regulated by the nonlinear feedback systems between genetic instabilities, environmental signals, cellular protein flows, and gene regulatory networks. Understanding the cybernetics of cancer requires the integration of information dynamics across multidimensional spatiotemporal scales, including genetic, transcriptional, metabolic, proteomic, epigenetic, and multi-cellular networks. However, the time-series analysis of these complex networks remains vastly absent in cancer research. With longitudinal screening and time-series analysis of cellular dynamics, universally observed causal patterns pertaining to dynamical systems, may self-organize in the si…
A note on the uniqueness result for the inverse Henderson problem
2019
The inverse Henderson problem of statistical mechanics is the theoretical foundation for many bottom-up coarse-graining techniques for the numerical simulation of complex soft matter physics. This inverse problem concerns classical particles in continuous space which interact according to a pair potential depending on the distance of the particles. Roughly stated, it asks for the interaction potential given the equilibrium pair correlation function of the system. In 1974, Henderson proved that this potential is uniquely determined in a canonical ensemble and he claimed the same result for the thermodynamical limit of the physical system. Here, we provide a rigorous proof of a slightly more …
CLASSIFICATION THEORY FOR PHASE TRANSITIONS
1993
A refined classification theory for phase transitions in thermodynamics and statistical mechanics in terms of their orders is introduced and analyzed. The refined thermodynamic classification is based on two independent generalizations of Ehrenfests traditional classification scheme. The statistical mechanical classification theory is based on generalized limit theorems for sums of random variables from probability theory and the newly defined block ensemble limit. The block ensemble limit combines thermodynamic and scaling limits and is similar to the finite size scaling limit. The statistical classification scheme allows for the first time a derivation of finite size scaling without reno…
Finite-size scaling in a microcanonical ensemble
1988
The finite-size scaling technique is extended to a microcanonical ensemble. As an application, equilibrium magnetic properties of anL×L square lattice Ising model are computed using the microcanonical ensemble simulation technique of Creutz, and the results are analyzed using the microcanonical ensemble finite-size scaling. The computations were done on the multitransputer system of the Condensed Matter Theory Group at the University of Mainz.
Evaluating the predictive power of sun-induced chlorophyll fluorescence to estimate net photosynthesis of vegetation canopies: A SCOPE modeling study
2016
Abstract Progress in imaging spectroscopy technology and data processing can enable derivation of the complete sun-induced chlorophyll fluorescence (SIF) emission spectrum. This opens up opportunities to fully exploit the use of the SIF spectrum as an indicator of photosynthetic activity. Simulations performed with the coupled fluorescence–photosynthesis model SCOPE were used to determine how strongly canopy-leaving SIF can be related to net photosynthesis of the canopy (NPC) for various canopy configurations. Regression analysis between SIF retrievals and NPC values produced the following general findings: (1) individual SIF bands that were most sensitive to NPC were located around the fir…
Simplified Interception/Evaporation Model
2021
It is known that at the event scale, evaporation losses of rainfall intercepted by canopy are a few millimeters, which is often not much in comparison to other stocks in the water balance. Nevertheless, at yearly scale, the number of times that the canopy is filled by rainfall and then depleted can be so large that the interception flux may become an important fraction of rainfall. Many accurate interception models and models that describe evaporation by wet canopy have been proposed. However, they often require parameters that are difficult to obtain, especially for large-scale applications. In this paper, a simplified interception/evaporation model is proposed, which considers a modified …