Search results for "Logical analysis"
showing 10 items of 139 documents
Common genes associated with antidepressant response in mouse and man identify key role of glucocorticoid receptor sensitivity.
2017
Response to antidepressant treatment in major depressive disorder (MDD) cannot be predicted currently, leading to uncertainty in medication selection, increasing costs, and prolonged suffering for many patients. Despite tremendous efforts in identifying response-associated genes in large genome-wide association studies, the results have been fairly modest, underlining the need to establish conceptually novel strategies. For the identification of transcriptome signatures that can distinguish between treatment responders and nonresponders, we herein submit a novel animal experimental approach focusing on extreme phenotypes. We utilized the large variance in response to antidepressant treatmen…
Identifying Prognostic SNPs in Clinical Cohorts: Complementing Univariate Analyses by Resampling and Multivariable Modeling
2016
Clinical cohorts with time-to-event endpoints are increasingly characterized by measurements of a number of single nucleotide polymorphisms that is by a magnitude larger than the number of measurements typically considered at the gene level. At the same time, the size of clinical cohorts often is still limited, calling for novel analysis strategies for identifying potentially prognostic SNPs that can help to better characterize disease processes. We propose such a strategy, drawing on univariate testing ideas from epidemiological case-controls studies on the one hand, and multivariable regression techniques as developed for gene expression data on the other hand. In particular, we focus on …
Simple Muscle Architecture Analysis (SMA): An ImageJ macro tool to automate measurements in B-mode ultrasound scans
2020
In vivo measurements of muscle architecture (i.e. the spatial arrangement of muscle fascicles) are routinely included in research and clinical settings to monitor muscle structure, function and plasticity. However, in most cases such measurements are performed manually, and more reliable and time-efficient automated methods are either lacking completely, or are inaccessible to those without expertise in image analysis. In this work, we propose an ImageJ script to automate the entire analysis process of muscle architecture in ultrasound images: Simple Muscle Architecture Analysis (SMA). Images are filtered in the spatial and frequency domains with built-in commands and external plugins to hi…
Levosimendan protects human hepatocytes from ischemia-reperfusion injury.
2017
Background Ischemia-reperfusion injury (IRI) is a major challenge in liver transplantation. The mitochondrial pathway plays a pivotal role in hepatic IRI. Levosimendan, a calcium channel sensitizer, was shown to attenuate apoptosis after IRI in animal livers. The aim of this study was to investigate the effect of levosimendan on apoptosis in human hepatocytes. Methods Primary human hepatocytes were either exposed to hypoxia or cultured under normoxic conditions. After the hypoxic phase, reoxygenation was implemented and cells were treated with different concentrations of levosimendan (10ng/ml, 100ng/ml, 1000ng/ml). The overall metabolic activity of the cells was measured using 3-(4,5-dimeth…
Next-Generation Sequencing Identifies Potential Actionable Targets in Paediatric Sarcomas
2021
Background: Bone and soft-tissue sarcomas represent 13% of all paediatric malignancies. International contributions to introduce next-generation sequencing (NGS) approaches into clinical application are currently developing. We present the results from the Precision Medicine program for children with sarcomas at a reference centre. Results: Samples of 70 paediatric sarcomas were processed for histopathological analysis, reverse transcriptase polymerase chain reaction (RT-PCR) and next-generation sequencing (NGS) with a consensus gene panel. Pathogenic alterations were reported and, if existing, targeted recommendations were translated to the clinic. Seventy paediatric patients with sarcomas…
Deviance sensitivity in the auditory cortex of freely moving rats.
2018
Deviance sensitivity is the specific response to a surprising stimulus, one that violates expectations set by the past stimulation stream. In audition, deviance sensitivity is often conflated with stimulus-specific adaptation (SSA), the decrease in responses to a common stimulus that only partially generalizes to other, rare stimuli. SSA is usually measured using oddball sequences, where a common (standard) tone and a rare (deviant) tone are randomly intermixed. However, the larger responses to a tone when deviant does not necessarily represent deviance sensitivity. Deviance sensitivity is commonly tested using a control sequence in which many different tones serve as the standard, eliminat…
Cell stimulation versus cell death induced by sequential treatments with pulsed electric fields and cold atmospheric pressure plasma
2018
Pulsed electric fields (PEFs) and cold atmospheric pressure plasma (CAP) are currently both investigated for medical applications. The exposure of cells to PEFs can induce the formation of pores in cell membranes and consequently facilitate the uptake of molecules. In contrast, CAP mainly acts through reactive species that are generated in the liquid environment. The objective of this study was to determine, if PEFs combined with plasma-treated cell culture medium can mutually reinforce effects on viability of mammalian cells. Experiments were conducted with rat liver epithelial WB-F344 cells and their tumorigenic counterpart WB-ras for a direct comparison of non-tumorigenic and tumorigenic…
Who and how? : Preservice teachers as active agents developing professional identities
2016
Abstract This study is part of an ongoing action research project with preservice class teachers in Finland. The study aims to better understand the forms agency takes in preservice teachers' professional identity development. Through the dialogical analysis of student assignments, this study outlines how student teachers are active within their own development and the way in which experiences are drawn on as preservice teachers exert their identity-agency. The results of this study provide a relational picture of identity development highlighting the way in which identity-agency is contextualized, potentially nourished by the relationships between self and other and dependent on experience.
Imperativos, normas y verdad | Imperatives, norms and truth.
2019
Resumen: Antes de emprender el análisis lógico de las normas jurídicas constitucionales, o de las normas en general, es preciso intentar resolver una cuestión previa que afecta a la posibilidad de existencia de una lógica de las normas: el dilema de Jørgensen. Nuestra propuesta de solución de este dilema es la siguiente: las normas son expresiones performativas. Al mismo tiempo, las expresiones performativas son enunciados que tienen valor de verdad. Además, las normas jurídicas son enunciados del tipo “A dice p”, lo que explica que puedan existir normas verdaderas y, al mismo tiempo, contradictorias entre sí.
 Abstract: Before embarking on the logical analysis of constitutional legal…
Problemas multiplicativos relacionados con la división de fracciones : un estudio sobre su enseñanza y aprendizaje
2013
Los estudiantes tienen dificultades para asociar el enunciado de un problema multiplicativo con la operación que permite resolverlo; esta investigación identifica los tipos de problemas multiplicativos que los estudiantes reconocen como de división de fracciones. Mediante el análisis histórico-epistemológico de textos de enseñanza sobre tres épocas históricas y ocho períodos diferentes, se obtiene un listado de variables de enseñanza (algoritmos, sentidos de uso de fracción y de división de fracciones, representaciones, problemas), así como los valores de dichas variables. Se localizan en los textos consultados algunas reglas particulares y seis algoritmos generales, cuyo predominio ha vari…