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showing 10 items of 12024 documents

Genomic Differentiation and Demographic Histories of Atlantic and Indo-Pacific Yellowfin Tuna (Thunnus albacares) Populations.

2017

Recent developments in the field of genomics have provided new and powerful insights into population structure and dynamics that are essential for the conservation of biological diversity. As a commercially highly valuable species, the yellowfin tuna (Thunnus albacares) is intensely exploited throughout its distribution in tropical oceans around the world, and is currently classified as near threatened. However, conservation efforts for this species have so far been hampered by limited knowledge of its population structure, due to incongruent results of previous investigations. Here, we use whole-genome sequencing in concert with a draft genome assembly to decipher the global population str…

0106 biological sciences0301 basic medicineYellowfin tunademographypopulation genomicsDemographic historyPopulation010603 evolutionary biology01 natural sciencesPopulation genomics03 medical and health sciencesGeneticseducationEcology Evolution Behavior and Systematicseducation.field_of_studyNear-threatened speciesbiologyconservationbiology.organism_classificationFishery030104 developmental biologyfisheries managementwhole-genome sequencingtunaTunahuman activitiesIndo-PacificThunnusResearch ArticleGenome biology and evolution
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Gene flow from an adaptively divergent source causes rescue through genetic and demographic factors in two wild populations of Trinidadian guppies

2016

Genetic rescue, an increase in population growth owing to the infusion of new alleles, can aid the persistence of small populations, but its use as a management tool is limited by a lack of empirical data geared towards predicting effects of gene flow on local adaptation and demography. Experimental translocations provide an ideal opportunity to monitor the demographic consequences of gene flow. In this study we take advantage of two experimental introductions of Trinidadian guppies to test the effects of gene flow on downstream native populations. We individually marked guppies from the native populations to monitor population dynamics for 3 months before and 26 months after gene flow. We …

0106 biological sciences0301 basic medicinecapture-mark-recaptureGenetic genealogyPoecilia reticulataPopulationdemographic rescueBiology010603 evolutionary biology01 natural sciencesGene flow03 medical and health sciencesgenetic rescueddc:570GeneticsAlleleeducationhybridizationEcology Evolution Behavior and SystematicsLocal adaptationGeneticseducation.field_of_studycapture‐mark‐recaptureEcotypePopulation sizeSmall population sizeOriginal Articlesfitness030104 developmental biologyväestönkasvuEvolutionary biologypopulation growthta1181Original ArticleGeneral Agricultural and Biological Sciencesgene flowEvolutionary Applications
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Transcriptome Analysis of Pistacia vera Inflorescence Buds in Bearing and Non-Bearing Shoots Reveals the Molecular Mechanism Causing Premature Flower…

2020

The alteration of heavy (&ldquo

0106 biological sciences0301 basic medicinelcsh:QH426-470polyaminesalternate bearing flower bud abscission Pistacia vera polyamines01 natural sciencesTranscriptome03 medical and health sciencesAbscissionalternate bearingSettore AGR/07 - Genetica AgrariaBotanyGeneticsSecondary metabolismGenetics (clinical)PistaciabiologyBudbiology.organism_classificationSettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboreelcsh:Genetics030104 developmental biologyInflorescenceShoot<i>Pistacia vera</i>Plant hormoneflower bud abscission010606 plant biology & botanyGenes
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Evolutionary history of two cryptic species of northern African jerboas

2020

Abstract Background: Climatic variation and geologic change both play significant roles in shaping species distributions, thus affecting their evolutionary history. In Sahara-Sahel, climatic oscillations shifted the desert extent during the Pliocene-Pleistocene interval, triggering the diversification of several species. Here, we investigated how these biogeographical and ecological events have shaped patterns of genetic diversity and divergence in African Jerboas, desert specialist rodents. We focused on two sister and cryptic species, Jaculus jaculus and J. hirtipes, where we (1) evaluated their genetic differentiation, (2) reconstructed their evolutionary and demographic history; (3) tes…

0106 biological sciences0301 basic medicinereproductive isolationSpeciation01 natural sciencesGene flowSahara-SahelJaculus jaculusAfrica NorthernPhylogenysopeutumineneducation.field_of_studycryptic diversityDesertsEcologyReproductive isolationBiological EvolutionphylogeneticsaavikotPhylogeneticsPhylogeographylocal adaptationympäristönmuutoksetResearch ArticleDemographic historySpecies complexEvolutionjyrsijätGenetic SpeciationCryptic diversityLocal adaptationPopulationRodentiaBiologydesertsEnvironment010603 evolutionary biologyDNA MitochondrialAfrican jerboas03 medical and health sciencesQH359-425AnimalseducationEcology Evolution Behavior and SystematicsEcosystemLocal adaptationEcological nicheGenetic diversityfylogenetiikkaGenetic Variation15. Life on landbiology.organism_classificationaavikkojerbotdemographic historyReproductive isolation030104 developmental biologyspeciationHaplotypesEvolutionary biologyJaculuslajiutuminen
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Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors

2019

Reactive oxygen species (ROS)-dependent signaling pathways from chloroplasts and mitochondria merge at the nuclear protein RADICAL-INDUCED CELL DEATH1 (RCD1). RCD1 interacts in vivo and suppresses the activity of the transcription factors ANAC013 and ANAC017, which mediate a ROS-related retrograde signal originating from mitochondrial complex III. Inactivation of RCD1 leads to increased expression of mitochondrial dysfunction stimulon (MDS) genes regulated by ANAC013 and ANAC017. Accumulating MDS gene products, including alternative oxidases (AOXs), affect redox status of the chloroplasts, leading to changes in chloroplast ROS processing and increased protection of photosynthetic apparatus.…

0106 biological sciences0301 basic medicineretrograde signalingChloroplastsArabidopsisPlant BiologyMitochondrion01 natural sciencesElectron Transport Complex IIIGene Expression Regulation PlantArabidopsisOXIDATIVE STRESS-RESPONSETranscriptional regulationCYCLIC ELECTRON FLOWBiology (General)Nuclear proteinANAC transcription factors1183 Plant biology microbiology virologyreactive oxygen speciesbiologyChemistryRETROGRADE REGULATIONGeneral NeuroscienceQRNuclear Proteinsfood and beveragesGeneral MedicinePlants Genetically Modified:Science::Biological sciences [DRNTU]Cell biologyMitochondriaChloroplastviherhiukkasetMedicineSignal transductionmitochondrial functionsResearch ArticleSignal TransductionQH301-705.5SciencemitokondriotGenetics and Molecular BiologyGeneral Biochemistry Genetics and Molecular BiologyPROTEIN COMPLEXESSIGNALING PATHWAYS03 medical and health scienceschloroplastStress PhysiologicalALTERNATIVE OXIDASESkasvitENZYME-ACTIVITIESredox signalingTranscription factorarabidopsis RCD1General Immunology and MicrobiologybiokemiaArabidopsis Proteinsta1182Biology and Life Sciencesbiology.organism_classification030104 developmental biologyCELL-DEATHPLANT-MITOCHONDRIAA. thalianaGeneral BiochemistryRetrograde signalingGENES-ENCODING MITOCHONDRIALproteiinit010606 plant biology & botanyTranscription Factors
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Adaptation to a seasonally varying environment: a strong latitudinal cline in reproductive diapause combined with high gene flow inDrosophila montana

2011

Adaptation to seasonal changes in the northern hemisphere includes an ability to predict the forthcoming cold season from gradual changes in environmental cues early enough to prepare for the harsh winter conditions. The magnitude and speed of changes in these cues vary between the latitudes, which induces strong selection pressures for local adaptation. We studied adaptation to seasonal changes in Drosophila montana, a northern maltfly, by defining the photoperiodic conditions leading to adult reproductive diapause along a latitudinal cline in Finland and by measuring genetic differentiation and the amount of gene flow between the sampling sites with microsatellites. Our data revealed a cl…

0106 biological sciences0303 health sciencesEcologyEcologyNorthern HemisphereCline (biology)15. Life on landDiapauseBiology010603 evolutionary biology01 natural sciencesGene flowLatitude03 medical and health sciences13. Climate actionGenetic variationEcology Evolution Behavior and Systematics030304 developmental biologyNature and Landscape ConservationIsolation by distanceLocal adaptationEcology and Evolution
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Ventilation and gas exchange before and after voluntary static surface breath-holds in clinically healthy bottlenose dolphins, Tursiops truncatus

2019

ABSTRACT We measured respiratory flow ( V ), breathing frequency ( f R ), tidal volume ( V T ), breath duration and end-expired O 2 content in bottlenose dolphins ( Tursiops truncatus ) before and after static surface breath-holds ranging from 34 to 292 s. There was considerable variation in the end-expired O 2 , V T and f R following a breath-hold. The analysis suggests that the dolphins attempt to minimize recovery following a dive by altering V T and f R to rapidly replenish the O 2 stores. For the first breath following a surface breath-hold, the end-expired O 2 decreased with dive duration, while V T and f R increased. Throughout the recovery period, end-expired O 2 increased while the…

0106 biological sciences0303 health sciencesRespiratory ratePhysiologyChemistry030310 physiologyAquatic ScienceBreath holds010603 evolutionary biology01 natural sciences03 medical and health sciencesRecovery periodAnimal scienceMarine mammalRespiratory flowInsect ScienceBreathingRespiratory effortAnimal Science and ZoologyMolecular BiologyEcology Evolution Behavior and SystematicsTidal volumeJournal of Experimental Biology
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SEXUAL SELECTION WHEN FERTILIZATION IS NOT GUARANTEED

2005

Much of the theory of sexual selection assumes that females do not generally experience difficulties getting their eggs fertilized, yet sperm limitation is occasionally documented. How often does male limitation form a selection for female traits that improve their mating rate? The question is difficult to test, because if such traits evolve to be efficient, sperm limitation will no longer appear to be a problem to females. Here, we suggest that changes in choosiness between populations, and in particular between virgin and mated females, offer an efficient way to test this hypothesis. We model the "wallflower effect," that is, changes in female preferences due to time and mortality costs o…

0106 biological sciences0303 health scienceseducation.field_of_studyEcologyPopulationBiology010603 evolutionary biology01 natural sciencesSperm03 medical and health sciencesWallflowerMate choiceSexual selectionGeneticsMatingGeneral Agricultural and Biological ScienceseducationSperm precedenceEcology Evolution Behavior and SystematicsSelection (genetic algorithm)030304 developmental biologyDemographyEvolution
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Inter-oceanic variation in patterns of host-associated divergence in a seabird ectoparasite

2011

Aim Parasites with global distributions and wide host spectra provide excellent models for exploring the factors that drive parasite diversification. Here, we tested the relative force of host and geography in shaping population structure of a widely distributed and common ectoparasite of colonial seabirds, the tick Ixodes uriae. Location Two natural geographic replicates of the system: numerous seabird colonies of the North Pacific and North Atlantic Ocean basins. Methods Using eight microsatellite markers and tick samples from a suite of multi-specific seabird colonies, we examined tick population structure in the North Pacific and compare patterns of diversity and structure to those in t…

0106 biological sciences0303 health scienceseducation.field_of_studyEcologybiologyEcologyPopulationTickIxodes uriaebiology.organism_classification010603 evolutionary biology01 natural sciencesGene flow03 medical and health sciencesPhylogeographybiology.animalparasitic diseasesGenetic structureBiological dispersalSeabirdeducationEcology Evolution Behavior and Systematics030304 developmental biologyJournal of Biogeography
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2019

Aposematic organisms couple conspicuous warning signals with a secondary defense to deter predators from attacking. Novel signals of aposematic prey are expected to be selected against due to positive frequency-dependent selection. How, then, can novel phenotypes persist after they arise, and why do so many aposematic species exhibit intrapopulation signal variability? Using a polytypic poison frog ( Dendrobates tinctorius ), we explored the forces of selection on variable aposematic signals using 2 phenotypically distinct (white, yellow) populations. Contrary to expectations, local phenotype was not always better protected compared to novel phenotypes in either population; in the white po…

0106 biological sciences0303 health scienceseducation.field_of_studyMultidisciplinaryDendrobatesFrequency-dependent selectionPopulationZoologyAposematismBiologybiology.organism_classification010603 evolutionary biology01 natural sciencesPredationGene flowWhite (mutation)03 medical and health sciencesSignal variabilityeducation030304 developmental biologyProceedings of the National Academy of Sciences
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