Search results for "MAM"

showing 10 items of 1679 documents

The Drosophila Hox gene Ultrabithorax acts both in muscles and motoneurons to orchestrate formation of specific neuromuscular connections

2016

Hox genes are known to specify motoneuron pools in the developing vertebrate spinal cord and to control motoneuronal targeting in several species. However, the mechanisms controlling axial diversification of muscle innervation patterns are still largely unknown. We present data showing that the Drosophila Hox gene Ultrabithorax (Ubx) acts in the late embryo to establish target specificity of ventrally projecting RP motoneurons. In abdominal segments A2 to A7, RP motoneurons innervate the ventrolateral muscles VL1-4, with VL1 and VL2 being innervated in a Wnt4-dependent manner. In Ubx mutants, these motoneurons fail to make correct contacts with muscle VL1, a phenotype partially resembling t…

0301 basic medicineCell typeEmbryo Nonmammaliananimal structuresNeuromuscular JunctionGenes InsectMuscle DevelopmentNeuromuscular junctionAnimals Genetically ModifiedHox genes03 medical and health sciencesWNT4MorphogenesismedicineAnimalsDrosophila ProteinsHox geneWnt Signaling PathwayMolecular BiologyTranscription factorUltrabithoraxHomeodomain ProteinsMotor NeuronsGeneticsbiologyMusclesmusculoskeletal neural and ocular physiologyfungiGenes HomeoboxGene Expression Regulation Developmentalbiology.organism_classificationMuscle innervationSegmental patterningCell biologyMotoneuronsDrosophila melanogaster030104 developmental biologymedicine.anatomical_structurenervous system209embryonic structuresDrosophilaWnt signalling pathwayDrosophila melanogasterDrosophila ProteinTranscription FactorsResearch ArticleDevelopmental BiologyDevelopment
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Tangential Intrahypothalamic Migration of the Mouse Ventral Premamillary Nucleus and Fgf8 Signaling

2021

The tuberal hypothalamic ventral premamillary nucleus (VPM) described in mammals links olfactory and metabolic cues with mating behavior and is involved in the onset of puberty. We offer here descriptive and experimental evidence on a migratory phase in the development of this structure in mice at E12.5–E13.5. Its cells originate at the retromamillary area (RM) and then migrate tangentially rostralward, eschewing the mamillary body, and crossing the molecularly distinct perimamillary band, until they reach a definitive relatively superficial ventral tuberal location. Corroborating recent transcriptomic studies reporting a variety of adult glutamatergic cell types in the VPM, and different p…

0301 basic medicineCell typeQH301-705.5organotypic culturesBiologyFgf8Cell and Developmental Biologydorsal premamillary nucleus (DPM)03 medical and health sciencesGlutamatergic0302 clinical medicineFGF8neuronal tangential migrationmedicinehypothalamusBiology (General)Original ResearchEmbryoCell BiologyMamillary Bodyventral premamillary nucleus (VPM)retromamillary area (RM)Subthalamic nucleus030104 developmental biologymedicine.anatomical_structureHypothalamusembryonic structuresperimamillary bandNeuroscienceNucleus030217 neurology & neurosurgeryDevelopmental BiologyFrontiers in Cell and Developmental Biology
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Enhanced autophagic-lysosomal activity and increased BAG3-mediated selective macroautophagy as adaptive response of neuronal cells to chronic oxidati…

2019

Oxidative stress and a disturbed cellular protein homeostasis (proteostasis) belong to the most important hallmarks of aging and of neurodegenerative disorders. The proteasomal and autophagic-lysosomal degradation pathways are key measures to maintain proteostasis. Here, we report that hippocampal cells selected for full adaptation and resistance to oxidative stress induced by hydrogen peroxide (oxidative stress-resistant cells, OxSR cells) showed a massive increase in the expression of components of the cellular autophagic-lysosomal network and a significantly higher overall autophagic activity. A comparative expression analysis revealed that distinct key regulators of autophagy are upregu…

0301 basic medicineClinical BiochemistryLFQ Label-free quantificationLETM Leucine zipper and EF-hand containing transmembrane proteinmedicine.disease_causeBiochemistryCHX Cycloheximide0302 clinical medicineBNIP3 Bcl-2 interacting protein 3RAPA RapamycinPIK3C3 Class III PI3‐kinasePhosphorylationlcsh:QH301-705.5Neuronslcsh:R5-920PolyUB PolyubiquitinChemistryBAG3OPA1 Optic atrophy 1TOR Serine-Threonine KinasesWIPI1 WD repeat domain phosphoinositide-interacting protein 1ATG Autophagy relatedTFEB Transcription factor EBCell biologyMitochondriasiRNA Small interfering RNADLP1 Dynamin-like protein 1LAMP1 Lysosomal‐associated membrane protein 1PURO Puromycinlcsh:Medicine (General)Protein homeostasisResearch PaperBafA1 Bafilomycin A1LAMP2 Lysosomal‐associated membrane protein 2Proteasome Endopeptidase ComplexRAB18 Member RAS oncogeneTUB TubulinLC3 Light chain 3 proteinOxidative phosphorylationBAG3CTSD Cathepsin DModels BiologicalCell Line03 medical and health sciencesDownregulation and upregulationMacroautophagymedicineAutophagyHumansAdaptationBAG1 Bcl-2-associated athanogene 1BECN1 Beclin1PI3K/AKT/mTOR pathwayAdaptor Proteins Signal TransducingTEM Transmission electron microscopyHsp70 Heat shock protein 70Organic ChemistryAutophagyAutophagosomesmTOR Mammalian target of rapamycinHsp70Oxidative Stress030104 developmental biologyProteostasislcsh:Biology (General)CV CanavanineBAG3 Bcl-2-associated athanogene 3MTT (3-(45-Dimethylthiazol-2-yl)-25-Diphenyltetrazolium Bromide)Apoptosis Regulatory ProteinsLysosomes030217 neurology & neurosurgeryOxidative stressRedox Biology
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Influence of pathway topology and functional class on the molecular evolution of human metabolic genes

2018

Metabolic networks comprise thousands of enzymatic reactions functioning in a controlled manner and have been shaped by natural selection. Thanks to the genome data, the footprints of adaptive (positive) selection are detectable, and the strength of purifying selection can be measured. This has made possible to know where, in the metabolic network, adaptive selection has acted and where purifying selection is more or less strong and efficient. We have carried out a comprehensive molecular evolutionary study of all the genes involved in the human metabolism. We investigated the type and strength of the selective pressures that acted on the enzyme-coding genes belonging to metabolic pathways …

0301 basic medicineComputer and Information SciencesEvolutionary ProcessesScienceMetabolic networkMetabolic networksBiologyTopologyGenomeBiochemistryEvolutionary geneticsEvolution Molecular03 medical and health sciencesNegative selection0302 clinical medicineMolecular evolutionEnzyme metabolismAnimalsHumansCentralityEnzyme ChemistryGeneSelection (genetic algorithm)030304 developmental biologyMammals0303 health sciencesEvolutionary BiologyMultidisciplinaryNatural selectionQRBiology and Life SciencesProteinsEvolutionary rateEnzymesMetabolic pathway030104 developmental biologyMetabolismMetabolic pathwaysEnzymologyMedicineMolecular evolution030217 neurology & neurosurgeryNetwork AnalysisResearch Article
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Topographic Independent Component Analysis reveals random scrambling of orientation in visual space

2017

Neurons at primary visual cortex (V1) in humans and other species are edge filters organized in orientation maps. In these maps, neurons with similar orientation preference are clustered together in iso-orientation domains. These maps have two fundamental properties: (1) retinotopy, i.e. correspondence between displacements at the image space and displacements at the cortical surface, and (2) a trade-off between good coverage of the visual field with all orientations and continuity of iso-orientation domains in the cortical space. There is an active debate on the origin of these locally continuous maps. While most of the existing descriptions take purely geometric/mechanistic approaches whi…

0301 basic medicineComputer scienceVisionVisual spaceStatistics as Topiclcsh:MedicineSocial SciencesSpace (mathematics)Scramblingchemistry.chemical_compound0302 clinical medicineCognitionLearning and MemoryAnimal CellsMedicine and Health SciencesPsychologylcsh:Sciencemedia_commonVisual CortexNeuronsMammalsObject RecognitionCoding MechanismsBrain MappingMultidisciplinaryGeographyOrientation (computer vision)Visual fieldmedicine.anatomical_structureVertebratesSensory PerceptionCellular TypesAnatomyNeuronal TuningResearch ArticleCartographyPrimatesmedia_common.quotation_subjectOcular AnatomyRetina03 medical and health sciencesTopographic MapsOcular SystemMemoryPerceptionOrientationNeuronal tuningmedicineAnimalsHumansCortical surfaceComputational NeuroscienceRetinabusiness.industrylcsh:ROrganismsCognitive PsychologyBiology and Life SciencesComputational BiologyRetinalPattern recognitionCell Biology030104 developmental biologyVisual cortexchemistryRetinotopyCellular NeuroscienceAmniotesEarth SciencesCognitive Sciencelcsh:QPerceptionArtificial intelligencebusiness030217 neurology & neurosurgeryNeurosciencePLoS ONE
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Analysis of Microstructure of the Cardiac Conduction System Based on Three-Dimensional Confocal Microscopy

2016

The specialised conducting tissues present in the ventricles are responsible for the fast distribution of the electrical impulse from the atrio-ventricular node to regions in the subendocardial myocardium. Characterisation of anatomical features of the specialised conducting tissues in the ventricles is highly challenging, in particular its most distal section, which is connected to the working myocardium via Purkinje-myocardial junctions. The goal of this work is to characterise the architecture of the distal section of the Purkinje network by differentiating Purkinje cells from surrounding tissue, performing a segmentation of Purkinje fibres at cellular scale, and mathematically describin…

0301 basic medicineConfocal Microscopylcsh:Medicine030204 cardiovascular system & hematologylaw.inventionPurkinje Cells0302 clinical medicineAnimal CellslawMedicine and Health SciencesMyocyteSegmentationlcsh:ScienceMammalsMicroscopyMicroscopy ConfocalMultidisciplinaryLight MicroscopyHeartAnimal ModelsAnatomyVertebratesRabbitsCellular TypesAnatomyElectrical conduction system of the heartNetwork AnalysisResearch ArticleComputer and Information SciencesCell typeCardiac VentriclesHeart VentriclesMuscle TissueBiologyResearch and Analysis MethodsImaging data03 medical and health sciencesImaging Three-DimensionalModel OrganismsHeart Conduction SystemConfocal microscopyAnimalsComplex network analysisMuscle CellsMyocardiumlcsh:ROrganismsBiology and Life SciencesCell BiologyWheat germ agglutininBiological Tissue030104 developmental biologyAmniotesCardiovascular Anatomylcsh:QEndocardiumBiomedical engineeringPLOS ONE
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Measuring spectrally-resolved information transfer.

2020

Information transfer, measured by transfer entropy, is a key component of distributed computation. It is therefore important to understand the pattern of information transfer in order to unravel the distributed computational algorithms of a system. Since in many natural systems distributed computation is thought to rely on rhythmic processes a frequency resolved measure of information transfer is highly desirable. Here, we present a novel algorithm, and its efficient implementation, to identify separately frequencies sending and receiving information in a network. Our approach relies on the invertible maximum overlap discrete wavelet transform (MODWT) for the creation of surrogate data in t…

0301 basic medicineDiscrete wavelet transformInformation transferComputer scienceEntropyInformation Theory0302 clinical medicineWaveletMathematical and Statistical TechniquesMedicine and Health SciencesBiology (General)Wavelet TransformsTemporal cortexMammalsEcologySystems BiologyApplied MathematicsSimulation and ModelingPhysicsWavelet transformMagnetoencephalographyEukaryotaBrainSignal FilteringComputational Theory and MathematicsModeling and SimulationPhysical SciencesVertebratesThermodynamicsEngineering and TechnologyWavelet transforms ; Algorithms ; Magnetoencephalography ; Information entropy ; Signal filtering ; Ferrets ; Permutation ; EntropyAnatomyAlgorithmInformation EntropyAlgorithmsResearch ArticleComputer and Information SciencesQH301-705.5PermutationWavelet AnalysisPrefrontal CortexResearch and Analysis Methods03 medical and health sciencesCellular and Molecular NeuroscienceGeneticsEntropy (information theory)AnimalsHumansInformation flow (information theory)Molecular BiologyEcology Evolution Behavior and SystematicsDiscrete MathematicsFerretsOrganismsBiology and Life Sciences030104 developmental biologyCombinatoricsSignal ProcessingAmniotesTransfer entropyZoologyMathematical Functions030217 neurology & neurosurgeryMathematicsPLoS computational biology
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Early Commissural Diencephalic Neurons Control Habenular Axon Extension and Targeting.

2016

Summary Most neuronal populations form on both the left and right sides of the brain. Their efferent axons appear to grow synchronously along similar pathways on each side, although the neurons or their environment often differ between the two hemispheres [1–4]. How this coordination is controlled has received little attention. Frequently, neurons establish interhemispheric connections, which can function to integrate information between brain hemispheres (e.g., [5]). Such commissures form very early, suggesting their potential developmental role in coordinating ipsilateral axon navigation during embryonic development [4]. To address the temporal-spatial control of bilateral axon growth, we…

0301 basic medicineEmbryo NonmammalianEfferentNeurogenesisThalamusBiologyTime-Lapse ImagingGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesmedicineAnimalsAxonDiencephalonZebrafishZebrafishBody PatterningNeuronsAxon extensionAnatomyCommissureZebrafish Proteinsbiology.organism_classificationAxon growthAxons030104 developmental biologymedicine.anatomical_structureHabenulanervous systemGeneral Agricultural and Biological SciencesNeuroscienceCurrent biology : CB
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Autophagy is required for sea urchin oogenesis and early development.

2016

SummaryAutophagy is a major intracellular pathway for the degradation and recycling of cytosolic components. Emerging evidence has demonstrated its crucial role during the embryo development of invertebrates and vertebrates. We recently demonstrated a massive activation of autophagy in Paracentrotus lividus embryos under cadmium stress conditions, and the existence of a temporal relationship between induced autophagy and apoptosis. Although there have been numerous studies on the role of autophagy in the development of different organisms, information on the autophagic process during oogenesis or at the start of development in marine invertebrates is very limited. Here we report our recent …

0301 basic medicineEmbryo NonmammalianFluorescent Antibody TechniqueCaspase 3ApoptosisFertilization in VitroBiologyParacentrotus lividus03 medical and health sciencesbiology.animalOrganelleBotanyAutophagyAnimalsSettore BIO/06 - Anatomia Comparata E CitologiaSea urchinLC3 Caspase-3 Embryos Oocytes Paracentrotus lividusAutophagyEmbryoCell BiologyMarine invertebratesbiology.organism_classificationCell biology030104 developmental biologyOocytesParacentrotusMacrolidesMicrotubule-Associated ProteinsIntracellularDevelopmental BiologyZygote (Cambridge, England)
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Perturbation of Developmental Regulatory Gene Expression by a G-Quadruplex DNA Inducer in the Sea Urchin Embryo.

2018

The G-quadruplex (G4) is a four-stranded DNA structure identified in vivo in guanine-rich regions located in the promoter of a number of genes. Intriguing evidence suggested that small molecules acting as G4-targeting ligands could potentially regulate multiple cellular processes via either stabilizing or disruptive effects on G4 motifs. Research in this field aims to prove the direct role of G4 ligands and/or structures on a specific biological process in a complex living organism. In this study, we evaluate in vivo the effects of a nickel(II)-salnaphen-like complex, named Nisaln, a potent G4 binder and stabilizer, during embryogenesis of the sea urchin embryo. We describe developmental de…

0301 basic medicineEmbryo NonmammalianGene regulatory networksea urchin embryo.G-quadruplexLigandsBiochemistry03 medical and health scienceschemistry.chemical_compound0302 clinical medicineCoordination ComplexesNickelAnimalsInducerGene Regulatory NetworksPromoter Regions GeneticGeneRegulator geneRegulation of gene expressionGene Expression Regulation DevelopmentalEmbryoDNACell biologyG-Quadruplexes030104 developmental biologyG-quadruplex DNAchemistrySea Urchins030217 neurology & neurosurgeryDNABiochemistry
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