Search results for "MINERALIZATION"
showing 10 items of 312 documents
Discovery of Ca oxalate crystals associated with fungi in moss travertines (Bryoherms, freshwater heterogeneous stromatolites)
1995
Buffered decalcification of live moss and liverwort (Hepaticae) travertines resulted in the release of a large number of organisms (bacteria, cyanobacteria, fungi, eukaryotic algae, and small animals), which constitute an “organic mat”; (also called an algal mat or biofilm). This mat is calcified and commonly has laminations, allowing moss travertines to be considered as stromatolitic structures. After decalcification of 300 samples of travertines (using dilute acetic acid), only 9 released Ca oxalate crystals in the form of needle bundles, spherulites, and tetragonal bipyramidal prisms. These crystalline forms are identical to those found in some phanerophytes and soils. Mycelian filaments…
Phosphorus NMR as a tool to study mineralization of organophosphonates—The ability of Spirulina spp. to degrade glyphosate
2007
Abstract A commercially available mixed culture of Spirulina spp. exhibited a remarkable ability to degrade the widely used organophosphorus herbicide glyphosate, that served as sole source of either phosphorus or nitrogen for cyanobacterial growth. 31P NMR analysis of spent media appeared to be an effective and simple technique to follow disappearance of the phosphonate and release of inorganic phosphate in biodegradation process(es).
Experimental modeling of bacterially-induced Ca carbonate precipitation: new insights on possible mechanisms.
2015
The contribution of microorganisms, particularly bacteria, in carbonate mineral formation, the main natural processes controlling CO2 level in the atmosphere, has played an important role since the Archean Eon. In this study we review our recent experimental work on CaCO3 precipitation induced by two anoxygenic phototrophic bacteria (APB), Rhodovulum steppense A-20sT and Rhodovulum sp. S-17-65, and by cyanobacteria Gloeocapsa sp. f-6gl. These bacteria are representatives of two important groups of photosynthetic organisms present at the Earth surface both in the past and at the present times. The mechanisms of organomineralization deriving from APB and cyanobacteria activities are drastical…
KOSMOS 2018 Gran Canaria mesocosm study: water column biogeochemistry
2021
The data set compiles biogeochemical water column collected during a KOSMOS mesocosm experiment carried out in the frame work of the Ocean Artificial Upwelling project. The experiment was performed in the North-East Atlantic Ocean off the coast of Gran Canaria in autumn 2018 and lasted for 39 days. In this study we investigated the effect of different intensities of artificial upwelling combined with two upwelling modes (recurring additions versus one singular addition) on POC export and its potential transfer efficiency to depth. The data set includes the amounts of surface water that were exchanged with nutrient-rich deep water (from ~300 m depth), primary production and chlorophyll a, el…
KOSMOS 2018 Gran Canaria mesocosm study: particle flux data from sediment trap
2021
The data set compiles sinking flux data collected during a KOSMOS mesocosm experiment carried out in the frame work of the Ocean Artificial Upwelling project. The experiment was performed in the North-East Atlantic Ocean off the coast of Gran Canaria in autumn 2018 and lasted for 39 days. In this study we investigated the effect of different intensities of artificial upwelling combined with two upwelling modes (recurring additions versus one singular addition) on POC export and its potential transfer efficiency to depth. The data set includes the amounts of surface water that were exchanged with nutrient-rich deep water (from ~300 m depth). It also contains particle flux data, i.e. POC flux…
Manganese/polymetallic nodules: Micro-structural characterization of exolithobiontic- and endolithobiontic microbial biofilms by scanning electron mi…
2009
Polymetallic/ferromanganese nodules (Mn-nodules) provide a rich source for manganese. It is not yet known if the nodules have a biogenic or an abiogenic origin. Here we applied the technique of high-resolution scanning electron microscopy, in combination with energy dispersive X-ray spectroscopical (EDX) analysis, to trace the existence of microbial biofilms. Two spatially separated assemblies exist, the exolithobiontic- and endolithobiontic colonizations. The exolithobiontic colonization is seen in the micro-canals, which traverse the outer surface layer of the nodules and are formed by elongated filamentous organisms, which show no signs of mineralization. In the center of the nodules thr…
Impact of maize mucilage on atrazine mineralization andatzC abundance
2005
Soil was amended with maize mucilage, a major rhizodeposit, to study its role on the number of culturable soil micro-organisms, the structure of the bacterial community, atrazine mineralization and atzC abundance. The maximal percentage of atrazine mineralization was lower for mucilage-amended than for water-amended soil. Total culturable soil bacteria and 16S rDNA copy number, measured by RT-PCR, presented similar values and were not significantly (P < 0.05) different among treatments. Mucilage applied at a rate of 70 mu g C g(-1) dry soil day(-1) over two weeks did not modify the abundance of the total soil microflora. Global structure of soil bacterial communities revealed by RISA analys…
Biofabrication of biosilica-glass by living organisms
2008
Biosilicification is an evolutionarily old and widespread type of biomineralization both in unicellular and multicellular organisms, including sponges, diatoms, radiolarians, choanoflagellates, and higher plants. In the last few years combined efforts in molecular biology, cell biology, and inorganic and analytical chemistry have allowed the first insight into the molecular mechanisms by which these organisms form an astonishing variety of siliceous structures that cannot be achieved by chemical methods. Here we report about the present stage of knowledge on structure, biochemical composition, and mechanisms of biosilica formation, focusing our attention particularly on sponges because of t…
Anisotropic lattice distortions in biogenic calcite induced by intra-crystalline organic molecules.
2006
9 pages; International audience; We have performed precise structural measurements on five different calcitic seashells by high-resolution X-ray powder diffraction on a synchrotron beam line and by laboratory single crystal X-ray diffraction. The unit cell parameters a and c of biogenic calcite were found to be systematically larger than those measured in the non-biogenic calcite. The maximum lattice distortion (about 2.10(-3)) was detected along the c-axis. Under heat treatment above 200 degrees C, a pronounced lattice relaxation was observed, which allowed us to conclude that anisotropic lattice swelling in biogenic calcite is induced by organic macromolecules incorporated within the sing…
Ab Initio Structure Determination of Vaterite by Automated Electron Diffraction
2012
tion that is fundamental for understanding material properties. Still, a number of compounds have eluded such kinds of analysis because they are nanocrystalline, highly disordered, with strong pseudosymmetries or available only in small amounts in polyphasic or polymorphic systems. These materials are crystallographically intractable with conventional Xray or synchrotron radiation diffraction techniques. Single nanoparticles can be visualized by high-resolution transmission electron microscopy (HR-TEM) up to sub�ngstrom resolution, [2] but obtaining 3D information is still a difficult task, especially for highly beam-sensitive materials and crystal structures with long cell parameters. Elec…