Search results for "MNDO"

showing 5 items of 15 documents

Benchmark Study for the Cysteine-Histidine Proton Transfer Reaction in a Protein Environment: Gas Phase, COSMO, QM/MM Approaches.

2015

Proton transfer reactions are of crucial interest for the investigation of proteins. We have investigated the accuracy of commonly used quantum chemical methods for the description of proton transfer reactions in different environments (gas phase, COSMO, QM/MM) using the proton transfer between the catalytic dyad residues cysteine 145 and histidine 41 of SARS coronavirus main protease as a case study. The test includes thermodynamic, kinetic, and structural properties. The study comprises computationally demanding ab initio approaches (HF, CC2, MP2, SCS-CC2, SCS-MP2, CCSD(T)), popular density functional theories (BLYP, B3LYP, M06-2X), and semiempirical methods (MNDO/d, AM1, RM1, PM3, PM6). …

ProtonChemistryAb initioThermodynamicsMNDOKinetic energycomputer.software_genreComputer Science ApplicationsQM/MMCoupled clusterBenchmark (computing)Data miningPhysical and Theoretical ChemistrycomputerHistidineJournal of chemical theory and computation
researchProduct

1H-naphtho[2,1-b]thiete and 2H-naphtho[2,3-b]thiete- synthesis and reactivity

1994

Abstract The title compounds 4 and 8 are obtained by flash vacuum pyrolysis of the corresponding hydroxymethylthionaphthols 3 and 7. Whereas 4 shows a smooth ring opening on heating, 8 is thermally stable but reacts photochemically. The different behavior is explained on the basis of an MNDO calculation. The valence isomers 4′ and 8′ represent thioquinonemethides, which are highly reactive components in [12π + 2π]cycloaddition processes (4 → 9, 10, 11; 8 → 12).

Valence (chemistry)Flash vacuum pyrolysisChemistryStereochemistryOrganic ChemistryDrug DiscoverySous videMNDOReactive componentsReactivity (chemistry)BiochemistryMedicinal chemistryCycloadditionTetrahedron Letters
researchProduct

ChemInform Abstract: 1H-Naphtho(2,1-b)thiete and 2H-Naphtho(2,3-b)thiete - Synthesis and Reactivity.

2010

Abstract The title compounds 4 and 8 are obtained by flash vacuum pyrolysis of the corresponding hydroxymethylthionaphthols 3 and 7. Whereas 4 shows a smooth ring opening on heating, 8 is thermally stable but reacts photochemically. The different behavior is explained on the basis of an MNDO calculation. The valence isomers 4′ and 8′ represent thioquinonemethides, which are highly reactive components in [12π + 2π]cycloaddition processes (4 → 9, 10, 11; 8 → 12).

Valence (chemistry)Flash vacuum pyrolysisComputational chemistryChemistryMNDOReactivity (chemistry)Reactive componentsGeneral MedicineRing (chemistry)CycloadditionChemInform
researchProduct

Naphthothiete und ihre Anwendung in der Heterocyclen-Synthese

1995

Naphtothietes and Their Application to the Synthesis of Heterocycles The three isomeric naphthothietes 5, 11, and 16 were prepared according to the reaction sequences shown in Schemes 1–3. The final step was in each case a flash vacuum pyrolysis (FVP) of the corresponding mercaptonaphthalenemethanol 4, 9, and 15, respectively. The thiete rings in 5 and 11 can be opened by gentle heating; the ring opening of the isomer 16 possesses a much higher activation barrier. A MNDO calculation of the ΔHf values of 5, 11, and 16 and the open isomers 5′, 11′, and 16′ provides an explanation for the different behavior. Photochemical ring opening represents a useful alternative. The reaction Schemes 4, 6,…

chemistry.chemical_classificationDouble bondchemistryActivation barrierFlash vacuum pyrolysisStereochemistryOrganic ChemistryMNDOGeneral ChemistryPhysical and Theoretical ChemistryRing (chemistry)Medicinal chemistryCycloadditionLiebigs Annalen
researchProduct

Theoretical study of selective H3 receptor antagonists of histamine

1993

Abstract The conformations and charge distributions of three selective H3 receptor antagonists of histamine were determined using the MNDO approach. The results suggest that the conformational flexibilities of betahistine, N α-(2-phenylacetyl)histamine and thioperamide are different; however, the low-energy conformations of these compounds show closely related spatial orderings. The MNDO calculations predict a significant population of the N1H form in the imidazole systems of N α-(2-phenylacetyl)histamine and thioperamide. Our results indicate that the conformational behaviour of H3 antagonists is closely similar to that reported for H2 antagonists of histamine. These results emphasize the …

education.field_of_studyThioperamideStereochemistryChemistryPopulationAntagonistMNDOCondensed Matter PhysicsBiochemistrychemistry.chemical_compoundComputational chemistrymedicineImidazoleBetahistinePhysical and Theoretical ChemistryHistamine H3 receptoreducationHistaminemedicine.drugJournal of Molecular Structure: THEOCHEM
researchProduct