Search results for "MYC"

showing 10 items of 3773 documents

The roles of whole-genome and small-scale duplications in the functional specialization of Saccharomyces cerevisiae genes

2013

Researchers have long been enthralled with the idea that gene duplication can generate novel functions, crediting this process with great evolutionary importance. Empirical data shows that whole-genome duplications (WGDs) are more likely to be retained than small-scale duplications (SSDs), though their relative contribution to the functional fate of duplicates remains unexplored. Using the map of genetic interactions and the re-sequencing of 27 Saccharomyces cerevisiae genomes evolving for 2,200 generations we show that SSD-duplicates lead to neo-functionalization while WGD-duplicates partition ancestral functions. This conclusion is supported by: (a) SSD-duplicates establish more genetic i…

0106 biological sciencesCancer ResearchGenome evolutionlcsh:QH426-470ArabidopsisSaccharomyces cerevisiaeBiology01 natural sciencesGenomeDivergenceEvolution Molecular03 medical and health sciencesMolecular evolutionPhylogeneticsGene DuplicationGene duplicationGeneticsMads-Box genesBiologyMolecular BiologyGenePhylogenyGenetics (clinical)Ecology Evolution Behavior and Systematics030304 developmental biologySmall-scale duplicationsGeneticsEvolutionary BiologyEvolutionary Theory0303 health sciencesAdaptive conflictHuman evolutionary geneticsNull mutationsSaccharomyces cerevisiae genomeProtein-Protein interactionslcsh:GeneticsEvolutionary biologyDiversificationEpistasisMolecular evolutionWhole-genome duplicationsGenome FungalYeast genomeInteractions revealResearch Article010606 plant biology & botany
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Magnesium ions promote assembly of channel-like structures from beticolin 0, a non-peptide fungal toxin purified from Cercospora beticola.

1998

Beticolins are toxins produced by the fungus Cercospora beticola. Using beticolin 0 (B0), we have produced a strong and Mg(2+)-dependent increase in the membrane conductance of Arabidopsis protoplasts and Xenopus oocytes. In protein-free artificial bilayers, discrete deflexions of current were observed (12 pS unitary conductance in symmetrical 100 mM KCl) in the presence of B0 (approximately 10 microM) and in the presence of nominal Mg2+. Addition of 50 microM Mg2+ induced a macroscopic current which could be reversed to single channel current by chelating Mg2+ with EDTA. Both unitary and macroscopic currents were ohmic. The increase in conductance of biological membranes triggered by B0 is…

0106 biological sciencesCations DivalentXenopusPlant Science01 natural sciencesHeterocyclic Compounds 4 or More RingsIon ChannelsDivalentMembrane Potentials03 medical and health sciencesAscomycotaBotanyGeneticsAnimalsMagnesiumMagnesium ion030304 developmental biologychemistry.chemical_classificationMembrane potential0303 health sciencesbiologyCell MembraneConductanceBiological membraneCell BiologyMembrane transportMycotoxinsCercospora beticolabiology.organism_classificationchemistryBiophysicsOocytesMembrane channel010606 plant biology & botanyThe Plant journal : for cell and molecular biology
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Changes in carbohydrate metabolism in Plasmopara viticola-infected grapevine leaves.

2011

International audience; The oomycete Plasmopara viticola is responsible for downy mildew, a severe grapevine disease. In infected grapevine leaves, we have observed an abnormal starch accumulation at the end of the dark period, suggesting modifications in starch metabolism. Therefore, several complementary approaches, including transcriptomic analyses, measurements of enzyme activities, and sugar quantification, were performed in order to investigate and to understand the effects of P. viticola infection on leaf starch and-to a larger extent-carbohydrate metabolism. Our results indicate that starch accumulation is associated with an increase in ADP-glucose pyrophosphorylase (AGPase) activit…

0106 biological sciencesChlorophyllPhysiologyStarchenzymatic activityhexosesbeta-AmylaseplantGlucose-1-Phosphate Adenylyltransferasetranscriptomic analyse01 natural sciencesinvertasechemistry.chemical_compoundphytopathogenGene Expression Regulation PlantVitisTrehalaseOligonucleotide Array Sequence Analysis0303 health sciencesbiologyfood and beveragesStarchGeneral MedicineEnzymesBiochemistryOomycetesRNA PlantPlasmopara viticolaCarbohydrate metabolism03 medical and health sciencesPlasmopara viticolaADP-glucose pyrophosphorylasePolysaccharidesVignecarbohydrate metabolism[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular Biology[ SDV.BBM ] Life Sciences [q-bio]/Biochemistry Molecular Biologytrehalose030304 developmental biologyPlant Diseasesphotosynthesisbiology.organism_classificationtrehalaseTrehaloseEnzyme assayPlant LeavesInvertasechemistryVitis viniferabiology.proteinDowny mildewfungialpha-AmylasesphysiopathologyAgronomy and Crop Science010606 plant biology & botany
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Development of an UHPLC-Q-Orbitrap HRMS method for simultaneous determination of mycotoxins and isoflavones in soy-based burgers

2019

Abstract Soy-based burgers, an option of meatless hamburger-style, are basically made with soy protein, wholegrains and veggies. However, some ingredients, such as cereals and soybean, are particularly susceptible to fungal contamination. Therefore, a fast and simple procedure for the simultaneous determination of isoflavones (n=12) and mycotoxins (n=21) in soy-based burgers was developed throughout an acetonitrile-based extraction and UHPLC-Q-Exactive Orbitrap HRMS determination for the first time. The procedure was properly validated in terms of linearity, accuracy (recovery range from 78 to 108%) and precision (RSD

0106 biological sciencesChromatographyFungal contamination04 agricultural and veterinary sciencesIsoflavonesOrbitrap040401 food science01 natural scienceslaw.inventionchemistry.chemical_compound0404 agricultural biotechnologychemistrylaw010608 biotechnologyMycotoxinSoy proteinFood ScienceLWT
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Antifungal and antimycotoxigenic activity of hydrolyzed goat whey on Penicillium spp: An application as biopreservation agent in pita bread

2020

Abstract Whey is a by-product of the cheese industry, yet it contains proteins that have a high nutritional value and are an important source of antifungal peptides. Food deterioration caused by toxigenic fungi is one of the challenges of food safety. In this context, trypsin was used to hydrolyse goat milk whey at 37. The resultant peptides were characterised by LC–ESI–TOF-MS. Antifungal activity of the goat milk whey hydrolysate (HGW) was determined against 10 toxigenic fungi from the genus Penicillium, in solid and liquid media. Furthermore, HGW was used as an ingredient for bread elaboration. Bread elaborated with HGW and inoculated with toxigenic fungi was included in a shelf-life stud…

0106 biological sciencesContext (language use)01 natural sciencesHydrolysateAntifungal peptideBioactive peptideMinimum inhibitory concentrationchemistry.chemical_compoundIngredient0404 agricultural biotechnology010608 biotechnologyWheyFood scienceMycotoxinchemistry.chemical_classificationbiologyShelf-lifedigestive oral and skin physiologyfood and beverages04 agricultural and veterinary sciencesBiopreservationbiology.organism_classificationToxigenic fungi040401 food sciencechemistryPenicilliumPropionateFood Science
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Addition of high C:N crop residues to a P-limited substrate constrains the benefits of arbuscular mycorrhizal symbiosis for wheat P and N nutrition

2021

Many aspects concerning the role of arbuscular mycorrhizal (AM) fungi in plant nutrient uptake from organic sources remain unclear. Here, we investigated the contribution of AM symbiosis to N and P uptake by durum wheat after the addition of a high C:N biomass to a P-limited soil. Plants were grown in pots in the presence or absence of a multispecies AM inoculum, with (Org) or without (Ctr) the addition of 15N-labelled organic matter (OM). A further treatment, in which 15N was applied in mineral form (Ctr+N) in the same amount as that supplied in the Org treatment, was also included. Inoculation with AM had positive effects on plant growth in both control treatments (Ctr and Ctr+N), mainly …

0106 biological sciencesCrop residueCanonical discriminant analysis; N:P ratio; Plant growth; Pot experiment; Triticum durum; Plant Roots; Soil; Symbiosis; Triticum; Mycorrhizaemedia_common.quotation_subject15N fertiliser recovery; Canonical discriminant analysis; N:P ratio; Plant growth; Pot experiment; Triticum durumBiomassPlant ScienceBiology01 natural sciencesPlant RootsCompetition (biology)03 medical and health sciencesSoilNutrientSymbiosisMycorrhizaeGeneticsOrganic matterSymbiosisMolecular BiologyEcology Evolution Behavior and SystematicsTriticumCanonical discriminant analysi030304 developmental biologymedia_commonPlant growthchemistry.chemical_classification0303 health sciencesPot experimentInoculationfungiSubstrate (chemistry)food and beveragesGeneral MedicineSettore AGR/02 - Agronomia E Coltivazioni ErbaceeAgronomychemistryTriticum durumN:P ratio15N fertiliser recoveryOriginal ArticleCanonical discriminant analysis010606 plant biology & botany
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AtCCS is a functional homolog of the yeast copper chaperone Ccs1/Lys7

2005

AbstractIn plant chloroplasts two superoxide dismutase (SOD) activities occur, FeSOD and Cu/ZnSOD, with reciprocal regulation in response to copper availability. This system presents a unique model to study the regulation of metal-cofactor delivery to an organelle. The Arabidopsis thaliana gene AtCCS encodes a functional homolog to yeast Ccs1p/Lys7p, a copper chaperone for SOD. The AtCCS protein was localized to chloroplasts where it may supply copper to the stromal Cu/ZnSOD. AtCCS mRNA expression levels are upregulated in response to Cu-feeding and senescence. We propose that AtCCS expression is regulated to allow the most optimal use of Cu for photosynthesis.

0106 biological sciencesCu/Zn superoxide dismutaseChloroplastsSaccharomyces cerevisiae ProteinsMolecular Sequence DataArabidopsisBiophysicsSaccharomyces cerevisiaeMetallo chaperoneChloroplastModels Biological01 natural sciencesBiochemistryGreen fluorescent proteinSuperoxide dismutase03 medical and health sciencesDownregulation and upregulationGene Expression Regulation PlantStructural BiologyOrganelleGeneticsAmino Acid SequenceRNA MessengerMolecular BiologyGene030304 developmental biology0303 health sciencesbiologyArabidopsis ProteinsGene Expression ProfilingGenetic Complementation TestCell BiologyYeastChloroplastProtein TransportBiochemistryChaperone (protein)Mutationbiology.proteinSequence AlignmentCopperMolecular Chaperones010606 plant biology & botanyFEBS Letters
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Nutritional symbionts enhance structural defence against predation and fungal infection in a grain pest beetle

2022

ABSTRACT Many insects benefit from bacterial symbionts that provide essential nutrients and thereby extend the hosts’ adaptive potential and their ability to cope with challenging environments. However, the implications of nutritional symbioses for the hosts’ defence against natural enemies remain largely unstudied. Here, we investigated whether the cuticle-enhancing nutritional symbiosis of the saw-toothed grain beetle Oryzaephilus surinamensis confers protection against predation and fungal infection. We exposed age-defined symbiotic and symbiont-depleted (aposymbiotic) beetles to two antagonists that must actively penetrate the cuticle for a successful attack: wolf spiders (Lycosidae) an…

0106 biological sciencesCuticlePhysiologyCuticleBeauveria bassianaZoologyOryzaephilus surinamensisAquatic Science010603 evolutionary biology01 natural sciencesPredation03 medical and health sciencesAposymbioticMutualismSymbiosisCandidatus Shikimatogenerans silvanidophilusOryzaephilus surinamensisSawtoothed grain beetleAnimalsSymbiosisMolecular BiologyEcology Evolution Behavior and Systematics030304 developmental biologyStructural defenceMutualism (biology)0303 health sciencesbiologyBacteroidetesHost (biology)fungi15. Life on landbiology.organism_classificationColeopteraMycosesPredatory BehaviorInsect ScienceAnimal Science and ZoologyResearch ArticleJournal of Experimental Biology
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Afforested fields benefit nutrient-demanding fungi

2015

Impaired ecosystems are converted back to natural ecosystems or some other target stage by means of restoration and management. Due to their agricultural legacy, afforested fields might be valuable compensatory habitats for rare fungal species that require nutrient-rich forest soils. Using a large-scale field experiment in Finland, we studied community composition of macrofungi (agarics and boletes) on former fields, which had been afforested as monocultures 20 years ago using native spruce Picea abies, pine Pinus sylvestris, and birch Betula pendula. We studied the effect of soil quality, tree species, and site on community composition and structure. Many nutrient-demanding as well as rare…

0106 biological sciencesEcologybiologyEcologyfungiPicea abies04 agricultural and veterinary sciencesEcological successionbiology.organism_classification010603 evolutionary biology01 natural sciencesSoil qualityBetula pendula040103 agronomy & agriculture0401 agriculture forestry and fisheriesAfforestationEcosystemSpecies richnessMycorrhizaEcology Evolution Behavior and SystematicsNature and Landscape ConservationRestoration Ecology
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Valorisation of Dairy Wastes Through Kefir Grain Production

2019

The main aim of this work was to investigate on kefir grains (KGs) increase using different dairy by-products. To this purpose, whey and deproteinized whey from cow, goat and sheep milk were compared to the pasteurized milk of the corresponding animal species. Each substrate was inoculated with 3% (w/v) of KGs cultivated in ultra-high temperature cow milk and evalu- ated for pH decrease, total titratable acidity increase and development of lactic acid bacteria (LAB) and yeasts released in the matrices after 24 h incubation at three different temperatures (20, 25 and 30 °C). The genotypic characterization of the dominating microbial populations resulted in the identification of two LAB belon…

0106 biological sciencesEnvironmental Engineering020209 energyDairy wastes Kefir grains Lactic acid bacteria Milk Whey YeastsPasteurizationTitratable acid02 engineering and technology01 natural scienceslaw.inventionchemistry.chemical_compoundSettore AGR/17 - Zootecnica Generale E Miglioramento Geneticofluids and secretionsKluyveromyces marxianuslaw010608 biotechnology0202 electrical engineering electronic engineering information engineeringFood scienceSheep milkWaste Management and DisposalbiologyRenewable Energy Sustainability and the EnvironmentLactococcus lactisfood and beveragesbiology.organism_classificationLactic acidchemistryLeuconostoc mesenteroidesFermentationSettore AGR/16 - Microbiologia Agraria
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