Search results for "Marker"

New technologies getting informations on repartition, orientation and identification of biomolecules on SPR chip

2008

We present herein an original approach, consisting to lead in parallel a global analysis (SPR) and nanoscale characterizations (AFM, mass spectrometry, TOF-SIMS) of bio-molecules on the biochip surface. The questions we want to answer concern especially the organization, orientation and identification of immobilized and captured biomolecules. In order to characterize the sensing layer in terms of molecular structure and orientation, we engaged a SPR-TOF SIMS first set of experiments (collaboration: Pr Aoyagi, Japan). Our results demonstrated that analysis of orientation of the immobilized cytochrome b5 is possible (ref2&3) and help to optimize and develop our sensing layer. We also recently…

A new method for the direct quantification of lipopolysaccharide by High Performance Liquid Chromatography coupled with Mass Spectrometry in non-infe…

2017

IF 13.246; International audience

In vivo and in vitro sensitivity of blastic plasmacytoid dendritic cell neoplasm to SL-401, an interleukin-3 receptor targeted biologic agent.

2015

International audience; Blastic plasmacytoid dendritic cell neoplasm is an aggressive malignancy derived from plasmacytoid dendritic cells. There is currently no accepted standard of care for treating this neoplasm, and therapeutic strategies have never been prospectively evaluated. Since blastic plasmacytoid dendritic cell neoplasm cells express high levels of interleukin-3 receptor α chain (IL3-Rα or CD123), antitumor effects of the interleukin-3 receptor-targeted drug SL-401 against blastic plasmacytoid dendritic cell neoplasm were evaluated in vitro and in vivo. The cytotoxicity of SL-401 was assessed in patient-derived blastic plasmacytoid dendritic cell neoplasm cell lines (CAL-1 and …

HSP70-exosomes for the monitoring of cancer

2020

Actually, cancer is unfortunately part of our daily life. Although it is better treated, more and more people are affected. Cancer research is working on two side: therapy and diagnosis. The next-generation therapies show wonderful results that were never reached so far, but diagnosis improvement can also save lives. It is well established that the earlier the cancer is diagnosed, the better the survival rate. Idem for the follow-up of the disease. In this context of precision and earliness, liquid biopsy spark interest and seems to have a bright future. It consists in the investigation of liquid analytes, particularly within the bloodstream, such as circulating tumor DNA, circulating tumor…

DIAGSOL : development of a new functional marker of exposure to herbicides B-triketones in an agricultural soil

2020

Numerous herbicides target an enzyme found not only in weeds but also in « non-target organisms » such as microorganisms. This proof-of-concept study aims to use microbial gene encoding the targeted enzyme or the targeted enzyme itself as a marker for herbicide exposure in soils. The hppd gene and the encoded enzyme (HPPD; 4-hydroxyphenylpyruvate dioxygenase), targeted by B-triketone herbicides, are the subject of this study. In silico analyses reveal that the hppd gene is spread out in all bacterial phyla. Primers specific to this gene were designed. This primer pair is used to measure the abundance, the composition and the diversity of the hppd bacterial community in soil microcosms expos…

Fusariose du Cyclamen (FoCy): Détection préventive du risque et contrôle biologique

2013

Fusarium oxysporum f. sp. cyclaminis: Identification of specific molecular markers for improved disease prevention

2014

Fusarium oxysporum is a well-known soil-borne and ubiquitous fungus. The species includes a high diversity of saprophytic and pathogenic populations. The phytopathogenic ones are subdivided into formae speciales according to their host specificity. The forma specialis cyclaminis (FoCy) is causing Fusarium wilt only on cyclamen. It causes damages during the entire production line and can raise more than 50 % losses. FoCy is considered as the more destructive pathogen on cyclamen. To achieve a better understanding of the disease and a more efficient and eco-friendly way of control, we aim at finding a specific molecular marker allowing for early detection and quantification of the pathogen an…

Development of a new functional marker for β-triketone herbicides exposure in agricultural soils

2018

The β-triketone herbicides are maize selective herbicides that have been largely applied in replacement of atrazine, banned in Europe in 2003. Their mode of action lays on the inhibition of the p-hydroxyphenylpyruvate dioxygenase (HPPD), a key enzyme of the carotenoid biosynthesis. In recent studies, we showed that within the soil bacterial community, many microorganisms possess a functional HPPD enzyme involved in tyrosine metabolism. These “non-target organisms” harbor the target of the β-triketone herbicides and consequently may be affected in response to its exposure. Within this context, the objective of our work is to check for the interest of hppd bacterial community as a marker of e…

Population genetics on Ambrosia genus: past, present and future

2014

National audience; A new Task Force within the COST-SMARTER has recently been created. This group is composed of population genetics experts from five European countries in charge of focusing on “Genetics on Ambrosia” (Austria, France, Germany, Hungary, Sweden). Their mission was to review molecular methods used in published genetics studies on common ragweed and to discuss about future projects. Two different types of molecular markers are generally used in the literature to investigate the genetic structure within and between introduced and/or native populations of common ragweed: microsatellite markers and amplified fragment length polymorphism (AFLP). These methods permit the researcher…

Genetic diversity of Tuber aestivum / uncinatum

2012

SPE IPM CT2 (vu VM)SPEIPMCT2 (vu VM); Tuber aestivum and Tuber uncinatum share a complicated common history from a taxonomic point of view. Indeed, different previous studies have shown contradictory conclusions. For some authors, Tuber aestivum and Tuber uncinatum are a single species and for others, they are two different species. In another study, we used 9 molecular markers: ITS1, ITS2, nuSSU, nuLSU, mtLSU, mtSSU, EF1α, β-tubulin and RPB2. The results show some genetic differences between samples for some of the analyzed sequences. However, no genetic differentiation that would support the separation of two different species was observed. We have concluded that Tuber aestivum and Tuber …