Search results for "Matrix"
showing 10 items of 3205 documents
Role of the Netrin-like Domain of Procollagen C-Proteinase Enhancer-1 in the Control of Metalloproteinase Activity
2010
The netrin-like (NTR) domain is a feature of several extracellular proteins, most notably the N-terminal domain of tissue inhibitors of metalloproteinases (TIMPs), where it functions as a strong inhibitor of matrix metalloproteinases and some other members of the metzincin superfamily. The presence of a C-terminal NTR domain in procollagen C-proteinase enhancers (PCPEs), proteins that stimulate the activity of astacin-like tolloid proteinases, raises the possibility that this might also have inhibitory activity. Here we show that both long and short forms of the PCPE-1 NTR domain, the latter beginning at the N-terminal cysteine known to be critical for TIMP activity, show no inhibition, at …
Glycosaminoglycans from Animal Tissue Foods and Gut Health
2013
Glycosaminoglycans (GAGs) are a special group of carbohydrates with structures that clearly distinguishes them from glycoproteins, and exert biological effects beyond basic nutrition. The complex nature of cell-surface and GAG-related structures present in extracellular matrix has led to the neglect of this potential therapeutic site for a long time. Consideration about carbohydrates only as energy source has become reoriented because of their pivotal roles in many biological processes; however, scarce advances have been made on GAG characterization in foods. This review focuses on the potential consequences of dietary GAGs on human intestinal health, considering nutritional aspects and bio…
The shell-forming proteome of Lottia gigantea reveals both deep conservations and lineage-specific novelties
2013
19 pages; International audience; Proteins that are occluded within the molluscan shell, the so-called shell matrix proteins (SMPs), are an assemblage of biomolecules attractive to study for several reasons. They increase the fracture resistance of the shell by several orders of magnitude, determine the polymorph of CaCO(3) deposited, and regulate crystal nucleation, growth initiation and termination. In addition, they are thought to control the shell microstructures. Understanding how these proteins have evolved is also likely to provide deep insight into events that supported the diversification and expansion of metazoan life during the Cambrian radiation 543 million years ago. Here, we p…
Synthesis of undulin by rat liver fat-storing cells: Comparison with fibronectin and tenascin
1992
Abstract Fat-storing cells (FSCs) are known to synthesize various components of the hepatic extracellular matrix and thereby play an important role during liver fibrogenesis. The aim of our study was to investigate the synthesis of undulin, a recently described connective tissue protein belonging to the fibronectin—tenascin superfamily of glycoproteins, by fat-storing cells in primary culture. SDS-PAGE analysis of immunoprecipitates from cell layer lysates or media pulse-labeled with radioactive methionine revealed undulin-specific bands A (270 kDa), B1 (190 kDa), and B2 (180 kDa) after reduction. A single undulin-specific transcript was detected at about 7 kb. Undulin synthesized by cell-f…
Supramolecular functionalization and concomitant enhancement in properties of Au25 clusters
2014
We present a versatile approach for tuning the surface functionality of an atomically precise 25 atom gold cluster using specific host-guest interactions between ?-cyclodextrin (CD) and the ligand anchored on the cluster. The supramolecular interaction between the Au25 cluster protected by 4-(t-butyl)benzyl mercaptan, labeled Au25SBB18, and CD yielding Au25SBB18�?�CDn (n = 1, 2, 3, and 4) has been probed experimentally using various spectroscopic techniques and was further analyzed by density functional theory calculations and molecular modeling. The viability of our method in modifying the properties of differently functionalized Au25 clusters is demonstrated. Besides modifying their optoe…
Approximate energy functionals for one-body reduced density matrix functional theory from many-body perturbation theory
2018
We develop a systematic approach to construct energy functionals of the one-particle reduced density matrix (1RDM) for equilibrium systems at finite temperature. The starting point of our formulation is the grand potential $\Omega [\mathbf{G}]$ regarded as variational functional of the Green's function $G$ based on diagrammatic many-body perturbation theory and for which we consider either the Klein or Luttinger-Ward form. By restricting the input Green's function to be one-to-one related to a set on one-particle reduced density matrices (1RDM) this functional becomes a functional of the 1RDM. To establish the one-to-one mapping we use that, at any finite temperature and for a given 1RDM $\…
On CPT Symmetry: Cosmological, Quantum-Gravitational and Other Possible Violations and Their Phenomenology
2004
I discuss various ways in which CPT symmetry may be violated, and their phenomenology in current or immediate future experimental facilities, both terrestrial and astrophysical. Specifically, I discuss first violations of CPT symmetry due to the impossibility of defining a scattering matrix as a consequence of the existence of microscopic or macroscopic space-time boundaries, such as Planck-scale Black-Hole (event) horizons, or cosmological horizons due to the presence of a (positive) cosmological constant in the Universe. Second, I discuss CPT violation due to breaking of Lorentz symmetry, which may characterize certain approaches to quantum gravity, and third, I describe models of CPT non…
Two Reflected Gray Code-Based Orders on Some Restricted Growth Sequences
2014
We consider two order relations: that induced by the m-ary reflected Gray code and a suffix partitioned variation of it. We show that both of them when applied to some sets of restricted growth sequences still yield Gray codes. These sets of sequences are: subexcedant and ascent sequences, restricted growth functions and staircase words. In particular, we give the first suffix partitioned Gray codes for restricted growth f unctions and ascent sequences; these latter sequences code various combinatorial classes as interval orders, upper triangular matrices without zero rows and zero columns whose non-negative integer entries sum up to n, and certain pattern-avoiding permutations. For each Gr…
Some new Hadamard designs with 79 points admitting automorphisms of order 13 and 19
2001
Abstract We have proved that there exists at least 2091 mutually nonisomorphic symmetric (79,39,19)-designs. In particular, 1896 of them admit an action of the nonabelian group of order 57, and an additional 194 an action of the nonabelian group of order 39.
On a matrix group constructed from an {R,s+1,k}-potent matrix
2014
Let R is an element of C-nxn be a {k}-involutory matrix (that is, R-k = I-n) for some integer k >= 2, and let s be a nonnegative integer. A matrix A is an element of C-nxn is called an {R,s + 1, k}-potent matrix if A satisfies RA = A(s+1)R. In this paper, a matrix group corresponding to a fixed {R,s + 1, k}-potent matrix is explicitly constructed, and properties of this group are derived and investigated. This group is then reconciled with the classical matrix group G(A) that is associated with a generalized group invertible matrix A.