Search results for "Method"
showing 10 items of 13253 documents
A Coclustering Approach for Mining Large Protein-Protein Interaction Networks
2012
Several approaches have been presented in the literature to cluster Protein-Protein Interaction (PPI) networks. They can be grouped in two main categories: those allowing a protein to participate in different clusters and those generating only nonoverlapping clusters. In both cases, a challenging task is to find a suitable compromise between the biological relevance of the results and a comprehensive coverage of the analyzed networks. Indeed, methods returning high accurate results are often able to cover only small parts of the input PPI network, especially when low-characterized networks are considered. We present a coclustering-based technique able to generate both overlapping and nonove…
A motif-independent metric for DNA sequence specificity
2011
Abstract Background Genome-wide mapping of protein-DNA interactions has been widely used to investigate biological functions of the genome. An important question is to what extent such interactions are regulated at the DNA sequence level. However, current investigation is hampered by the lack of computational methods for systematic evaluating sequence specificity. Results We present a simple, unbiased quantitative measure for DNA sequence specificity called the Motif Independent Measure (MIM). By analyzing both simulated and real experimental data, we found that the MIM measure can be used to detect sequence specificity independent of presence of transcription factor (TF) binding motifs. We…
The Application of Machine Learning Algorithms to the Analysis of Electromyographic Patterns From Arthritic Patients
2009
The main aim of our study was to investigate the possibility of applying machine learning techniques to the analysis of electromyographic patterns (EMG) collected from arthritic patients during gait. The EMG recordings were collected from the lower limbs of patients with arthritis and compared with those of healthy subjects (CO) with no musculoskeletal disorder. The study involved subjects suffering from two forms of arthritis, viz, rheumatoid arthritis (RA) and hip osteoarthritis (OA). The analysis of the data was plagued by two problems which frequently render the analysis of this type of data extremely difficult. One was the small number of human subjects that could be included in the in…
The rise of the middle author: Investigating collaboration and division of labor in biomedical research using partial alphabetical authorship
2017
Contemporary biomedical research is performed by increasingly large teams. Consequently, an increasingly large number of individuals are being listed as authors in the bylines, which complicates the proper attribution of credit and responsibility to individual authors. Typically, more importance is given to the first and last authors, while it is assumed that the others (the middle authors) have made smaller contributions. However, this may not properly reflect the actual division of labor because some authors other than the first and last may have made major contributions. In practice, research teams may differentiate the main contributors from the rest by using partial alphabetical author…
Procedimento estratégico em três estágios de seleção de variáveis para a obtenção de resultados equilibrados na pesquisa em saúde pública
2018
Multidisciplinary research in public health is approached using methods from many scientific disciplines. One of the main characteristics of this type of research is dealing with large data sets. Classic statistical variable selection methods, known as “screen and clean”, and used in a single-step, select the variables with greater explanatory weight in the model. These methods, commonly used in public health research, may induce masking and multicollinearity, excluding relevant variables for the experts in each discipline and skewing the result. Some specific techniques are used to solve this problem, such as penalized regressions and Bayesian statistics, they offer more balanced results a…
The value of open-source clinical science in pandemic response
2021
International audience
A multimodal retina-iris biometric system using the Levenshtein distance for spatial feature comparison
2020
Abstract The recent developments of information technologies, and the consequent need for access to distributed services and resources, require robust and reliable authentication systems. Biometric systems can guarantee high levels of security and multimodal techniques, which combine two or more biometric traits, warranting constraints that are more stringent during the access phases. This work proposes a novel multimodal biometric system based on iris and retina combination in the spatial domain. The proposed solution follows the alignment and recognition approach commonly adopted in computational linguistics and bioinformatics; in particular, features are extracted separately for iris and…
Novel Iris Biometric Watermarking Based on Singular Value Decomposition and Discrete Cosine Transform
2014
Published version of an article in the journal: Mathematical Problems in Engineering. Also available from the publisher at: http://dx.doi.org/10.1155/2014/926170 A novel iris biometric watermarking scheme is proposed focusing on iris recognition instead of the traditional watermark for increasing the security of the digital products. The preprocess of iris image is to be done firstly, which generates the iris biometric template from person's eye images. And then the templates are to be on discrete cosine transform; the value of the discrete cosine is encoded to BCH error control coding. The host image is divided into four areas equally correspondingly. The BCH codes are embedded in the sing…
2D ECG Image Based Biometric Identification Using Stacked Autoencoders
2021
The handcrafted features extraction methods have achieved remarkable results in ECG based biometric identification. However, they are sensitive to many factors: (1) intra and inter-individual variability, (2) heart rate variability, (3) powerline interference, baseline wander and muscle artifacts. To deal with these issues, deep learning approaches have been proposed to extract automatically the important features almost from original data without any preprocessing step (i.e., The original ECG signal mostly contains noise). Unlike conventional ECG based biometric approaches, which based either on fiducial and non-fiducial methods, the proposed approach can be implemented on end to end syste…
Local Directional Multi Radius Binary Pattern
2018
Face recognition becomes an important task performed routinely in our daily lives. This application is encouraged by the wide availability of powerful and low-cost desktop and embedded computing systems, while the need comes from the integration in too much real world systems including biometric authentication, surveillance, human-computer interaction, and multimedia management. This article proposes a new variant of LBP descriptor referred as Local Directional Multi Radius Binary Pattern (LDMRBP) as a robust and effective face descriptor. The proposed LDMRBP operator is built using new neighborhood topology and new pattern encoding scheme. The adopted face recognition system consists of th…