Search results for "Microbiology and Parasitology"

showing 10 items of 493 documents

The long-term cytoskeletal rearrangement induced by rabbit enteropathogenic Escherichia coli is Esp dependent but intimin independent.

1999

Attaching and effacing rabbit enteropathogenic Escherichia coli (REPEC) of the O103 serogroup adhere diffusely on HeLa cells and trigger a slow progressive cytopathic effect (CPE) characterized by the recruitment of vinculin and the assembly of actin stress fibres. In contrast to REPEC O103, the reference human EPEC strain E2348/69 is unable to trigger the CPE. In this study, we have shown first that the fimbrial adhesin AF/R2, which mediates the diffuse adhesion of REPEC O103, was not sufficient to induce the CPE capability upon E2348/69. Non-polar mutants of REPEC O103 for espA, espB, espD and eae were then constructed. The four mutants were unable to induce attaching and effacing lesions…

DNA BacterialMutantMolecular Sequence DataMicrobiologyBacterial AdhesionMicrobiology03 medical and health sciencesBacterial ProteinsEscherichia coliAnimalsHumansEnteropathogenic Escherichia coliCytoskeletonAdhesins BacterialMolecular Biology[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyActinCytoskeleton030304 developmental biologyIntiminCytopathic effect0303 health sciencesAdhesins Escherichia colibiologyBase Sequence030306 microbiologyEscherichia coli ProteinsGenetic Complementation TestREARRANGEMENTbiochemical phenomena metabolism and nutritionVinculinBacterial adhesin[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyGenes Bacterialbiology.proteinRabbitsCarrier ProteinsBacterial Outer Membrane ProteinsHeLa CellsMolecular microbiology
researchProduct

A chromosome map of the Flavescence dorée phytoplasma

2008

International audience; The Flavescence dorée phytoplasma (FD-P), a non-cultivable, plant-pathogenic bacterium of the class Mollicutes, is the causal agent of a quarantine disease affecting vineyards of southern Europe, mainly in southern France and northern Italy. To investigate FD-P diversity and phytoplasma genetic determinants governing the FD-P life cycle, a genome project has been initiated. A physical map of the chromosome of FD-P strain FD92, purified from infected broad beans, was constructed by performing restriction digests of the chromosome and resolving the fragments by PFGE. Single and double digestions of the chromosome with the enzymes SalI, BssHII, MluI and EagI were perfor…

DNA BacterialPhytoplasmaBACTERIOLOGIEMolecular Sequence DataCARTOGRAPHIE GENETIQUEMicrobiologyRestriction fragmentFLAVESCENCE DOREEMALADIE DES PLANTES03 medical and health sciencesBacterial ProteinsMOLLICUTEDeoxyribonucleases Type II Site-Specific030304 developmental biologySouthern blotGenetics0303 health sciencesbiology030306 microbiologyChromosomeFabaceaeGenes rRNASequence Analysis DNAGenome projectGENETIQUEPhysical Chromosome Mappingbiology.organism_classificationElectrophoresis Gel Pulsed-FieldBlotting SouthernRestriction site[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyItalyPHYTOPLASME DE LA FLAVESCENCE DOREEPhytoplasmabiology.proteinMollicutesCARTE CHROMOSOMIQUEFranceRRNA Operon
researchProduct

Fitness drift of an atrazine-degrading population under atrazine selection pressure.

2008

International audience; Pseudomonas sp. ADP harbouring the atrazine catabolic plasmid ADP1 was subcultured in liquid medium containing atrazine as sole source of nitrogen. After approximately 320 generations, a new population evolved which replaced the initial population. This newly evolved population grew faster and degraded atrazine more rapidly than the initial population. Plasmid profiles and Southern blot analyses revealed that the evolved strain, unlike the ancestral strain, presented a tandem duplication of the atzB gene encoding the second enzyme of the atrazine catabolic pathway responsible for the transformation of hydroxyatrazine to N-isopropylammelide. This duplication resulted …

DNA BacterialPopulationBiologyMicrobiologyPSEUDOMONAS SP03 medical and health scienceschemistry.chemical_compoundPlasmidGene DuplicationPseudomonasGene duplicationELEMENTSDirect repeatAtrazineInsertion sequenceSelection GeneticADAPTATIONeducationEcology Evolution Behavior and Systematics030304 developmental biologyGenetics0303 health scienceseducation.field_of_study030306 microbiologySALMONELLA-TYPHIMURIUMSTRAIN ADPCATABOLISM GENESTransformation (genetics)Blotting Southern[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologychemistryGenes BacterialBACTERIADNA Transposable ElementsGROWTHAtrazineTandem exon duplicationPLASMIDRESISTANCEPlasmidsEnvironmental microbiology
researchProduct

Bacteria and free-living amoeba in the Lascaux Cave.

2008

3 pages, 1 table, 18 references. The collaboration of the Lascaux restoration team is highly appreciated. We thank Marisa Chelius for valuable comments on the manuscript.

DNA BacterialeducationBenzalkonium chloridemedicine.disease_causeMicrobiologyConfined SpacesCaveFusarium solani species complexmedicineEnvironmental MicrobiologyAnimalsAir ConditioningProtozoaAmoebaMolecular Biology[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyFree living amoebaEcosystemgeographygeography.geographical_feature_categorybiologyBacteriaEcologyOutbreakfood and beveragesLascaux CavePathogenic bacteriaGeneral Medicinesocial sciencesDNA Protozoanbiology.organism_classificationmusculoskeletal systemhumanities[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyArchaeologyBiofilmsProtozoaPaintingsFrancePathogensBacteriaEnvironmental MonitoringResearch in microbiology
researchProduct

The rise and the fall of a Pseudomonas aeruginosa endemic lineage in a hospital

2021

The biological features that allow a pathogen to survive in the hospital environment are mostly unknown. The extinction of bacterial epidemics in hospitals is mostly attributed to changes in medical practice, including infection control, but the role of bacterial adaptation has never been documented. We analysed a collection of Pseudomonas aeruginosa isolates belonging to the Besançon Epidemic Strain (BES), responsible for a 12year nosocomial outbreak, using a genotype-to-phenotype approach. Bayesian analysis estimated the emergence of the clone in the hospital 5 years before its opening, during the creation of its water distribution network made of copper. BES survived better than the refe…

DNA Bacterialparallel evolutionLineage (genetic)Genomic IslandsPathogens and EpidemiologyBiologymedicine.disease_causeAmoeba (operating system)Disease OutbreaksMicrobiology03 medical and health sciencesAntibiotic resistanceDrug Resistance Multiple BacterialGenomic islandbacterial pathogensmedicineHumansPseudomonas InfectionsPathogenGenome size[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyResearch Articles030304 developmental biology0303 health sciencesoutbreak030306 microbiologyPseudomonas aeruginosahigh-risk cloneOutbreakBayes TheoremSequence Analysis DNAGeneral MedicineHospitals3. Good healthPhenotype[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyPseudomonas aeruginosa
researchProduct

Increase in norovirus activity reported in Europe.

2006

A large increase in norovirus outbreaks in Hungary and Germany was reported to European national health authorities via the Foodborne Viruses in Europe network

Databases FactualGenotypevirusesMESH : EuropeMESH : GermanyMESH : Health SurveysMESH : GenotypeMESH : Databases FactualMESH : Hungarymedicine.disease_cause[ SDV.MP.VIR ] Life Sciences [q-bio]/Microbiology and Parasitology/VirologyMESH : Information ServicesDisease OutbreaksEnvironmental healthGermanyMESH : Population SurveillancemedicineHumansMESH : Disease OutbreaksComputingMilieux_MISCELLANEOUSCaliciviridae Infections[SDV.MP.VIR] Life Sciences [q-bio]/Microbiology and Parasitology/VirologyNational healthInformation ServicesHungaryMESH : SeasonsMESH : NorovirusIncidenceMESH : HumansNorovirusOutbreakVirologyHealth SurveysMESH : IncidenceGastroenteritisMESH : GastroenteritisEuropeGeographyPopulation SurveillanceNorovirusSeasonsMESH : Caliciviridae InfectionsEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin
researchProduct

The cost-effectiveness of neonatal versus prenatal screening for congenital toxoplasmosis

2019

BackgroundCongenital Toxoplasmosis (CT) can have severe consequences. France, Austria, and Slovenia have prenatal screening programs whereas some other countries are considering universal screening to reduce congenital transmission and severity of infection in children. The efficiency of such programs is debated increasingly as seroprevalence among pregnant women and incidence of congenital toxoplasmosis show a steady decrease. In addition, uncertainty remains regarding the effectiveness of pre- and postnatal treatments.MethodTo identify cost-effective strategies, prenatal and neonatal screenings were compared using a decision-analytic model based on French guidelines and current knowledge …

Decision AnalysisEconomicsMaternal HealthCost-Benefit AnalysisSloveniaSocial SciencesPediatricsToxoplasmosis CongenitalPregnancy[SDV.MHEP.MI]Life Sciences [q-bio]/Human health and pathology/Infectious diseasesPrenatal DiagnosisMedicine and Health Sciences[SDV.MP.VIR] Life Sciences [q-bio]/Microbiology and Parasitology/Virology[SDV.MHEP.ME] Life Sciences [q-bio]/Human health and pathology/Emerging diseases[SDV.MHEP.ME]Life Sciences [q-bio]/Human health and pathology/Emerging diseasesQRObstetrics and Gynecology[SDV.MHEP.CSC] Life Sciences [q-bio]/Human health and pathology/Cardiology and cardiovascular systemFetal deathAustria[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology[SDV.MHEP.MI] Life Sciences [q-bio]/Human health and pathology/Infectious diseasesMedicineEngineering and TechnologyFemaleFranceManagement EngineeringToxoplasmosis[SDV.MP.PAR] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyResearch ArticleScienceDecision treesClinical Decision-MakingResearch and Analysis MethodsPediatric infectionsNeonatal Screening[SDV.MHEP.CSC]Life Sciences [q-bio]/Human health and pathology/Cardiology and cardiovascular systemParasitic DiseasesHumans[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyProtozoan InfectionsCost-effectiveness analysisInfant NewbornBiology and Life SciencesNeonatesModels Theoretical[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyEconomic AnalysisPregnancy ComplicationsBirthWomen's Health[SDV.MP.BAC] Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyDevelopmental Biology
researchProduct

Relative involvement of nitrate and nitrite reduction in the competitiveness of Pseudomonas fluorescens in the rhizosphere of maize under non-limitin…

2002

Competition between different isogenic mutants of Pseudomonas fluorescens unable to carry out the first steps of the denitrification pathway was compared in soil micro-columns non-planted or planted with maize. A new isogenic mutant of P. fluorescens YT101 affected in both nitrate and nitrite respirations was constructed and used as a model of non-denitrifying strain (FM69MS strain). The outcome of the selection exerted by the plant after co-inoculation of FM69MS at the same ratio either with an isogenic denitrifier unable to reduce nitrate (Nar(-) mutant) or with an isogenic NO2 (-) accumulator (Nir(-) mutant) was investigated in non-limiting NO3 (-) conditions. Regardless of the inoculate…

Denitrification[SDV]Life Sciences [q-bio]PopulationDenitrification pathwayMutantPseudomonas fluorescensApplied Microbiology and BiotechnologyMicrobiology03 medical and health scienceschemistry.chemical_compoundNitrateNitriteeducation[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesRhizosphereeducation.field_of_studyEcologybiology030306 microbiologyfood and beveragesbiology.organism_classification[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyAgronomychemistry
researchProduct

Robust image analysis methods for the detection and the characterization of compact objects : application to biology

2019

In the field of microbiology, many experiments are based on a fine observation of microorganisms. Because of their interest in the development of modern agri-food processes, it is important to study their development and survival rate under specific environmental conditions such as osmotic or thermal stress. Microscopic imaging is one of the most used tools for observing microorganisms. The manual interpretation of acquired images raises problems of subjectivity, cost and reproducibility. This thesis proposes the development of standardized image analysis tools allowing the interpretation of images at two scales:- At the scale of the observation slide: the use of specific counting slides (M…

Detection[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyCaracterisation[INFO.INFO-TS]Computer Science [cs]/Signal and Image Processing[INFO.INFO-TS] Computer Science [cs]/Signal and Image ProcessingCharacterizationImage[SPI.SIGNAL]Engineering Sciences [physics]/Signal and Image processingBiologyBiologie[SDV.MP] Life Sciences [q-bio]/Microbiology and Parasitology[SPI.SIGNAL] Engineering Sciences [physics]/Signal and Image processing
researchProduct

A small HSP, Lo18, interacts with the cell membrane and modulates lipid physical state under heat shock conditions in a lactic acid bacterium

2005

International audience; The small heat shock proteins (sHSP) are characterized by a chaperone activity to prevent irreversible protein denaturation. This study deals with the sHSP Lo18 induced by multiple stresses in Oenococcus oeni, a lactic acid bacterium. Using in situ immunocytochemistry and cellular fractionation experiments, we demonstrated the association of Lo18 with the membrane in O. oeni cells submitted to heat shock. The same result was obtained after exposure of cells to ethanol or benzyl alcohol, agents known to have an influence on membranes. For the different stresses, the protein was located on the periphery of the cell at membrane level and was also found within the cytopl…

DiphenylhexatrieneHot TemperatureBiophysicsFluorescence PolarizationBiologyBiochemistryImmunolocalizationSmall HSPCell membraneMembrane Lipids03 medical and health scienceschemistry.chemical_compoundHeat shock proteinMembrane fluiditymedicineMembrane fluidityLipid bilayer030304 developmental biologyOenococcus oeni0303 health sciences030306 microbiologyCell MembraneLipid–protein interactionCell Biologybiology.organism_classificationHeat-Shock Proteins SmallGram-Positive CocciMembranemedicine.anatomical_structure[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologychemistryBiochemistryBiophysicsLipochaperoneLaurdanOenococcus oeni
researchProduct