Search results for "Microorganisms"

Structure of Rhodococcus erythropolis limonene-1,2-epoxide hydrolase reveals a novel active site

2003

Epoxide hydrolases are essential for the processing of epoxide-containing compounds in detoxification or metabolism. The classic epoxide hydrolases have an alpha/beta hydrolase fold and act via a two-step reaction mechanism including an enzyme-substrate intermediate. We report here the structure of the limonene-1,2-epoxide hydrolase from Rhodococcus erythropolis, solved using single-wavelength anomalous dispersion from a selenomethionine-substituted protein and refined at 1.2 A resolution. This enzyme represents a completely different structure and a novel one-step mechanism. The fold features a highly curved six-stranded mixed beta-sheet, with four alpha-helices packed onto it to create a …

Simple molecular model for the binding of antibiotic molecules to bacterial ion channels

2003

A molecular model aimed at explaining recent experimental data by Nestorovich et al. [Proc. Natl. Acad. Sci. USA 99, 9789 (2002)] on the interaction of ampicillin molecules with the constriction zone in a channel of the general bacterial porin, OmpF (outer membrane protein F), is presented. The model extends T. L. Hill’s theory for intermolecular interactions in a pair of binding sites [J. Am. Chem. Soc. 78, 3330 (1956)] by incorporating two binding ions and two pairs of interacting sites. The results provide new physical insights on the role of the complementary pattern of the charge distributions in the ampicillin molecule and the narrowest part of the channel pore. Charge matching of int…

Pisum sativum – Pseudomonas interactions : influence on iron nutrution, growth and immunity of the host plant

2020

The project aimed at making progress in the knowledge of the iron-mediated interactions between pea and fluorescent pseudomonads in order to promote the iron-nutrition and health of the host-plant. A bibliographical study was conducted to draw up the state of the art concerning the influence of rhizosphere microorganisms on plant iron status (Chapter 1).Pisum sativum has been chosen as an agronomic model-plant because of its high potential in agroecology and in Human nutrition related to its ability to fix atmospheric nitrogen and to the high amino-acids content of its seeds. However, this species suffers from a high susceptibility to iron deficiency as expressed by the well-known chlorosis…

Case Studies of Macro-and Microplastics Pollution in Coastal Waters and Rivers: Is There a Solution With New Removal Technologies and Policy Actions?.

2020

This opinion paper on microplastics pollution has selected different aspects and case studies of micro and macro-plastic litter pollution in coastal waters, and rivers. We point out a discussion on this topic and ask ourselves if there is a solution to the global problem by developing new microplastics removal technologies as well as policy actions. The first two case studies are related with macroplastics marine litter in beaches, a third report describes a new simple sampling device for microplastics in coastal and nearshore areas, five case study assess microplastics pollution in worldwide coastal environments, sediments and catchments (India, Mexico, Australia, Europe and the Nordic Sea…

Bacterial Diseases of Bioenergy Woody Plants in Ukraine

2023

In this study, the characterization of several bacterial diseases affecting silver birch (Betula pendula Roth.), common ash (Fraxinus excelsior L.), white poplar (Populus alba L.), and white willow (Salix alba L.) in Ukraine were described. The typical symptoms, features of pathogenesis, and characteristics of the causative agents of the most common bacterial diseases of these tree species were shown. The following types of bacterioses were noted to be especially dangerous, namely, bacterial wetwood, fire blight, bacterial canker, and tuberculosis. Bacterial necrosis of the bark was a less dangerous disease. At the same time, all of the listed types of bacterioses were registered within the…

ENHANCEMENT OF WHEAT VIRUS-RESISTANCE AT APPLICATION OF THE SE NANOPARTICLES CITRATES AND CONSORTIUM OF SOIL MICROORGANISMS

2021

The influence of pre-sowing seed treatments of selenium nanocitrates (SeNPs) and application of soil formed microorganism consortium (biological preparation (BP) Extrakon) on wheat plants infected with wheat streak mosaic virus (WSMV) were investigated in greenhouse and fields conditions in 2018-2019 (on territories of Zabolotny Institute of Microbiology and Virology of NASU). The pre-sowing seed treatments of 1% selenium nanocitrates (SeNPs) with application of BP Extrakon initiating the growth of juvenile wheat in laboratory experiments were found. In the field experiment on variants of WSMV-infected plants, two weeks after inoculation (tillering stage), we observed the appearance of char…

Valorization of Citrus spp. Cultivars cultivated in Sicily for the industrial use of citrus derivatives and in particular for potential alternative u…

2021

[ES] En esta tesis doctoral se discuten una serie de cuestiones científicas relacionadas con a la producción y el procesamiento de algunas especies de cítricos de especial relevancia en Sicilia y en el área mediterránea. Los objetivos se centran en estudiar la trazabilidad y sostenibilidad de la producción de algunas especies de cítricos, así como encontrar nuevas aplicaciones a los subproductos y productos de desecho de la industria, con el fin de mejorar su rentabilidad. Por lo tanto, los temas que se desarrollarán serán los siguientes: caracterización de los compuestos bioactivos presentes en aceites esenciales y en el hidrolato de diferentes especies de cítricos; seguimiento del efecto …

Monitoring of the effects of added carbon by citrus hydrolates waste in a soil.

The hydrolates are the waste to be disposed of are a product of the industrial extraction process of the essential oils through cold pressing of the citrus peels. However, due to the presence of water soluble compounds (sugars, polyphenols, acids), hydrolates could be reused instead of being, due to the high economic burden, a problem in the disposal of the same, charged to the company. The aim of this work was to evaluate the effects of citrus hydrolate when directly applied as irrigation water on soil. Was monitored soil chemical and biochemical property, in particularly effect of the high carbon addition on microbial biomass, activity and structure community and effect on carbon soil sto…

Evolution and functional differentiation of recently diverged phytochelatin synthase genes from Arundo donax L.

2019

Plant phytochelatin synthases undergo evolutionarily rapid functional differentiation after duplication, allowing fast and precise adjustment of metal detoxification capacity by modulation of both transcription and enzymatic activity.

Temporal dynamic of biofilms enhances the settlement of the central-1 Mediterranean reef2 builder Dendropoma cristatum (Biondi, 1859)

2021

Research on marine invertebrate settlement provides baseline knowledge for restoration technique implementation, especially for biogenic engineers with limited dispersion ability. Previously, we determined that the maturity of a biofilm strongly enhances the settlement of the vermetid reef-builder Dendropoma cristatum . In order to elucidate which biofilm features support a higher settlement of this species, we analyse the structure and composition of a marine biofilm over time, through microscopic observations, eukaryotic and prokaryotic fingerprinting analyses and 16S rDNA Illumina sequencing. The vermetid settlement temporal increase matched with the higher biofilm extent on the substrat…