Search results for "Mimetic"

showing 10 items of 218 documents

Advances in Research for Biomimetic Materials

2018

Smart surfaces and materials can play a significant role in intelligent, adaptive and responsive envelopes because of these intrinsic properties. The environmental question and energy efficiency in which the construction sector is involved, is in a process that can not be interrupted and that puts researchers and designers in front of a scientific and design challenge in which it is necessary to contribute to find different ways of study and experimentation on new materials and constructive languages, ranging from the application, to the structural, design and molecular, to mention the main ones. The development of technologies is helping architects of the “biomimetic current” to recreate c…

Settore ICAR/12 - Tecnologia Dell'ArchitetturaAdaptive Sustainability Biomimetic Envelope Efficiency Smart Materials
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Apposition of silica lamellae during growth of spicules in the demosponge Suberites domuncula: Biological/biochemical studies and chemical/biomimetic…

2006

Recently it has been discovered that the formation of the siliceous spicules of Demospongiae proceeds enzymatically (via silicatein) and occurs matrix guided (on galectin strings). In addition, it could be demonstrated that silicatein, if immobilized onto inorganic surfaces, provides the template for the synthesis of biosilica. In order to understand the formation of spicules in the intact organism, detailed studies with primmorphs from Suberites domuncula have been performed. The demosponge spicules are formed from several silica lamellae which are concentrically arranged around the axial canal, harboring the axial filament composed of silicatein. Now we show that the appositional growth o…

Silicon dioxideNanotechnologyCatalysischemistry.chemical_compoundDemospongeSponge spiculeBiomimeticsStructural BiologyAnimalsSclerocyteNanotubesPropylaminesbiologyVesicleSilanesEnzymes ImmobilizedSilicon Dioxidebiology.organism_classificationCathepsinsSuberites domunculaLamella (surface anatomy)chemistryMicroscopy Electron ScanningBiophysicsSuberitesSuberitesJournal of Structural Biology
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Polynucleotide differentiation using hybrid solid-state nanopore functionalizing with α-hemolysin

2019

We report results from full atomistic molecular dynamics simulations on the properties of biomimetic nanopores. This latter result was obtained through the direct insertion of an α-hemolysin protein inside a hydrophobic solid-state nanopore. Upon translocation of different DNA strands, we demonstrate here that the theoretical system presents the same discrimination properties as the experimental one obtained previously. This opens an interesting way to promote the stability of a specific protein inside a solid nanopore to develop further biomimetic applications for DNA or protein sequencing.

Specific proteinPolynucleotidesSolid-state02 engineering and technologyMolecular Dynamics Simulation010402 general chemistry01 natural sciencesHemolysin ProteinsNanoporesMolecular dynamicschemistry.chemical_compoundProtein sequencingBiomimeticsAmino Acid SequenceChemistryHemolysinDNAGeneral Chemistry021001 nanoscience & nanotechnologyCondensed Matter Physics0104 chemical sciencesNanoporePolynucleotideBiophysics0210 nano-technologyHydrophobic and Hydrophilic InteractionsDNASoft Matter
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Chemoenzymatic Synthesis of Functional Sialyl LewisX Mimetics with a Heteroaromatic Core

2014

Functional mimetics of the sialyl Lewis(X) tetrasaccharide were prepared by the enzymatic sialylation of a 1,3-diglycosylated indole and a glycosyl azide, which was subsequently transformed into a 1,4-diglycosylated 1,2,3-triazole, by using the trans-sialidase of Trypanosoma cruzi. These compounds inhibited the binding of E-, L-, and P-selectin-coated nanoparticles to polyacrylamide-bound sialyl-Lewis(X) -containing neighboring sulfated tyrosine residues (sTyr/sLe(X) -PAA) at low or sub-millimolar concentrations. Except for E-selectin, the mimetics showed higher activities than the natural tetrasaccharide.

Spectrometry Mass Electrospray IonizationStereochemistryProton Magnetic Resonance SpectroscopyTrypanosoma cruziMolecular Sequence DataNeuraminidaseOligosaccharidessaccharide mimeticsBiochemistryenzyme catalysisEnzyme catalysischemistry.chemical_compoundSulfationTetrasaccharideAnimalsGlycosylTyrosineCarbon-13 Magnetic Resonance SpectroscopySialyl Lewis X AntigenGlycoproteinsIndole testheterocyclesOrganic ChemistryMolecular Mimicrycell adhesionGeneral ChemistryFull Paperscarbohydrates (lipids)Sialyl-Lewis XchemistryCarbohydrate SequenceSelectinsAzideChemistry, an Asian Journal
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Syntheses, X-ray structures, and physicochemical properties of phenoxo-bridged dinuclear nickel(II) complexes: kinetics of transesterification of 2-h…

2009

Four dinuclear nickel(II) complexes [Ni(II)(2)(L(1))(O(2)CMe)(2)(H(2)O)(2)][PF(6)].MeOH.3H(2)O (1), [Ni(II)(2)(L(1))(O(2)CMe)(2)(NCS)] (2), [Ni(II)(2)(L(2))(O(2)CMe)(2)(MeOH)(H(2)O)][ClO(4)] (3), and [Ni(II)(2)(L(2))(O(2)CMe)(2)(MeOH)(H(2)O)][BPh(4)].3MeOH.H(2)O (4) have been synthesized [HL(1): 2,6-bis[N-methyl-N-(2-pyridylethyl)amino]-4-methylphenol; HL(2): 2,6-bis[3-(pyridin-2-yl)pyrazol-1-ylmethyl]-4-methylphenol]. Complexes 1, 3, and 4 are new while complex 2 was reported previously by Fenton and co-workers (the structure of 2 was presented but no physicochemical properties of this complex were reported; in this work such studies have been completed). X-ray crystallographic analyses of…

Spectrophotometry InfraredStereochemistryKineticschemistry.chemical_elementPyrazoleCrystallography X-RayMedicinal chemistryInorganic Chemistrychemistry.chemical_compoundMagneticsOrganophosphorus CompoundsBiomimeticsNickelOrganometallic CompoundsMoietyChelationPhysical and Theoretical ChemistryEsterificationHydrolysisX-rayTitrimetryEstersTransesterificationHydrogen-Ion ConcentrationOrganophosphatesNickelKineticschemistryPotentiometryEthylamineOxidation-ReductionInorganic chemistry
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Visualization of RNA-Quadruplexes in Live Cells

2015

Visualization of DNA and RNA quadruplex formation in human cells was demonstrated recently with different quadruplex-specific antibodies. Despite the significant interest in these immunodetection approaches, dynamic detection of quadruplex in live cells remains elusive. Here, we report on NaphthoTASQ (N-TASQ), a next-generation quadruplex ligand that acts as a multiphoton turn-on fluorescent probe. Single-step incubation of human and mouse cells with N-TASQ enables the direct detection of RNA-quadruplexes in untreated cells (no fixation, permeabilization or mounting steps), thus offering a unique, unbiased visualization of quadruplexes in live cells.

Static ElectricityMelanoma ExperimentalLigands010402 general chemistryG-quadruplex01 natural sciencesBiochemistryCatalysisMice03 medical and health scienceschemistry.chemical_compoundColloid and Surface ChemistryBiomimeticsCationsCell Line TumorFluorescence Resonance Energy TransferAnimalsHumans[CHIM]Chemical Sciences[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular Biologyheterocyclic compoundsComputingMilieux_MISCELLANEOUSChelating AgentsFluorescent Dyes030304 developmental biologyPhotons[SDV.GEN]Life Sciences [q-bio]/Genetics0303 health sciencesbiologyChemistryRNADNAGeneral ChemistryFluorescenceMolecular biology3. Good health0104 chemical sciencesCell biologyVisualizationG-QuadruplexesFörster resonance energy transferMicroscopy FluorescenceCell cultureMCF-7 Cellsbiology.proteinRNAAntibodyDNAJournal of the American Chemical Society
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Dynamics of Pattern Formation in Biomimetic Systems

2008

This paper is an attempt to conceptualize pattern formation in self-organizing systems and, in particular, to understand how structures, oscillations or waves arise in a steady and homogenous environment, a phenomenon called symmetry breaking. The route followed to develop these ideas was to couple chemical oscillations produced by Belousov-Zhabotinsky reaction with confined reaction environments, the latter being an essential requirement for any process of Life. Special focus was placed on systems showing organic or lipidic compartments, which represent more reliable biomimetic matrices.

Statistics and Probability{CHEMICAL} {OSCILLATORS}Belousov-Zhabotinsky reactionLipid BilayersPattern formationNanotechnology{CHEMICAL} {OSCILLATORS}; Lipid systems; Reverse microemulsionsModels BiologicalTuring structuresGeneral Biochemistry Genetics and Molecular BiologyDiffusionBiomimeticsChemical oscillatorsAnimalsSymmetry breakingPhysicsGeneral Immunology and MicrobiologyChemistry PhysicalSystems BiologyApplied MathematicsLipid systemsBiomimetic systemsGeneral MedicineBelousov-Zhabotinsky reaction; Chemical oscillators; Turing structures; Biomimetic systems; Lipid systems; Reverse microemulsionsReverse microemulsionsBelousov–Zhabotinsky reactionModeling and SimulationEmulsionsGeneral Agricultural and Biological SciencesBiological system
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DNA interaction of CuII, NiII and ZnII functionalized salphen complexes: studies by linear dichroism, gel electrophoresis and PCR.

2013

The interaction of salphen-type NiII, CuII and ZnII complexes with native DNA was investigated by exploiting linear dichroism experiments. The NiII complex behaves as a typical intercalator, binding strongly and stiffening and unwinding the DNA. The strength of the DNA interaction is slightly weaker for the copper complex and much weaker for the zinc complex. Plasmid-DNA gel electrophoresis experiments indicated that while CuII and ZnII complexes do not induce the unwinding of supercoiled DNA, the NiII complex has a nuclease activity without the addition of external agents. On the other hand, as shown in the PCR assays, we demonstrate that, at the used concentrations, only the CuII complex …

StereochemistryIntercalation (chemistry)Molecular Conformationchemistry.chemical_elementZincPhenylenediaminesLinear dichroismCrystallography X-RayPolymerase Chain ReactionInorganic Chemistrychemistry.chemical_compoundBiomimetic MaterialsCoordination ComplexesNickelGel electrophoresisElectrophoresis Agar GelNucleaseDeoxyribonucleasesbiologyCircular DichroismDNASettore CHIM/08 - Chimica FarmaceuticaCopperCrystallographyZincAnticancerchemistrySettore CHIM/03 - Chimica Generale E Inorganicabiology.proteinDNA supercoilMetal complexeDNACopperDalton transactions (Cambridge, England : 2003)
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Physics of the nuclear pore complex: Theory, modeling and experiment

2021

Abstract The hallmark of eukaryotic cells is the nucleus that contains the genome, enclosed by a physical barrier known as the nuclear envelope (NE). On the one hand, this compartmentalization endows the eukaryotic cells with high regulatory complexity and flexibility. On the other hand, it poses a tremendous logistic and energetic problem of transporting millions of molecules per second across the nuclear envelope, to facilitate their biological function in all compartments of the cell. Therefore, eukaryotes have evolved a molecular “nanomachine” known as the Nuclear Pore Complex (NPC). Embedded in the nuclear envelope, NPCs control and regulate all the bi-directional transport between the…

Stochastic transportMolecular modelingGeneral Physics and AstronomyComputational biologyMolecular dynamics01 natural sciencesGenomeArticleDiffusionNanochannels0103 physical sciencesotorhinolaryngologic diseasesmedicineNuclear pore010306 general physicsPhysicsComputational modelIntrinsically disordered proteins010308 nuclear & particles physicsCompartmentalization (psychology)Nuclear pore complexCell nucleusCrowdingmedicine.anatomical_structureCytoplasmMultivalencyBiomimeticNucleusFunction (biology)Physics Reports
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Day-night differences in the sensitivity of adrenoceptors in the Syrian hamster pineal gland: an in vivo iontophoretic study.

1989

Abstract Investigations on the regulation of pineal melatonin synthesis in the Syrian hamster revealed distinct differences compared to this well-understood mechanism in rat. E.g., a circadian profile of pineal norepinephrine (NE) is absent, there is no β-adrenoceptor sensitivity during daytime and adrenergic receptor supersensitivity is not easily achieved. To elucidate the action of NE on pineal receptor sites, the effects of iontophoretic application of adrenergic compounds on spontaneous electrical discharge rates of pinealocytes were investigated during day- and nighttime. Following application of either NE, isoproterenol or clonidine, cells were activated, inhibited or not affected. W…

SympathomimeticsMaleendocrine systemmedicine.medical_specialtyAdrenergic receptorHamsterAdrenergicAction PotentialsBiologyPineal GlandClonidinePinealocytePineal glandNorepinephrineInternal medicineCricetinaemedicineAnimalsCircadian rhythmReceptorMolecular BiologyMesocricetusGeneral NeuroscienceIsoproterenolCircadian RhythmReceptors Adrenergicmedicine.anatomical_structureEndocrinologyNeurology (clinical)Developmental BiologyBrain research
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