Search results for "Mod"

showing 10 items of 39605 documents

Cetacean strandings and museum collections: A focus on Sicily island crossroads for mediterranean species

2021

The study examined the extent of the cetacean strandings in Italy, with a particular focus on Sicily Island. The paper aimed to contribute to the description of a pattern that contemplates the “regular and rare” cetacean species passage along the Sicilian coast. The estimate of marine cetacean strandings was extrapolated from the National Strandings Data Bank (BDS—Banca Dati Spiaggiamenti) and evaluated according to a subdivision in three coastal subregions: the Tyrrhenian sub-basin (northern Sicilian coast), the Ionian sub-basin (eastern Sicilian coast), and the Channel of Sicily (southern Sicilian coast). Along the Italian coast, more than 4880 stranding events have been counted in the pe…

0106 biological sciencesMediterranean climatenatural history museumsRare speciesSettore BIO/05 - ZoologiaZoological collectionsStenella coeruleoalbaMarine mammal010603 evolutionary biology01 natural sciencesMediterranean seaSpecies levelbiology.animalcetacean strandingsMediterranean biodiversitymarine mammalslcsh:QH301-705.5Nature and Landscape Conservationgeography.geographical_feature_categoryEcologybiology010604 marine biology & hydrobiologyEcological ModelingNatural history museumAgricultural and Biological Sciences (miscellaneous)language.human_languageCetacean strandingOceanographyGeographylcsh:Biology (General)Period (geology)languageSicilianChannel (geography)
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Community size affects the signals of ecological drift and niche selection on biodiversity

2019

AbstractEcological drift can override the effects of deterministic niche selection on small populations and drive the assembly of small communities. We tested the hypothesis that smaller local communities are more dissimilar among each other because of ecological drift than larger communities, which are mainly structured by niche selection. We used a unique, comprehensive dataset on insect communities sampled identically in a total of 200 streams in climatically different regions (Brazil and Finland) that differ in community size by fivefold. Null models allowed us to estimate the magnitude to which beta diversity deviates from the expectation under a random assembly process while taking di…

0106 biological sciencesMetacommunityEcology010604 marine biology & hydrobiologynull modelsNicheCommunity structureBeta diversitySmall population sizebeta diversity deviation15. Life on land010603 evolutionary biology01 natural sciencesGeographyHabitat destruction13. Climate actioncommunity assemblySpecies richnessaquatic insectsdispersalmetacommunitiesRelative species abundancedemographic stochasticity
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Does trait-based joint species distribution modelling reveal the signature of competition in stream macroinvertebrate communities?

2021

1. The occupancy and abundance of species are jointly driven by local factors, such as environmental characteristics and biotic interactions, and regional‐scale factors, such as dispersal and climate. Recently, it has been shown that biotic interactions shape species occupancies and abundances beyond local extents. However, for small ectothermic animals, particularly for those occurring in freshwater environments, the importance of biotic interactions remains understudied. Species‐to‐species associations from joint species distribution models (i.e. species associations while controlling for environmental characteristics) are increasingly used to draw hypotheses of which species possibly sho…

0106 biological sciencesMetacommunitymedia_common.quotation_subjectSpecies distributionpurotfunctional feeding guildsBiology010603 evolutionary biology01 natural sciencesCompetition (biology)Riversjoint species distribution modelsAbundance (ecology)substrate attachment modedistributionAnimalsdispersalEcosystemFinlandEcology Evolution Behavior and Systematicsmedia_commonEcology010604 marine biology & hydrobiologyinterspecific competitionvesiekosysteemitlevinneisyysInterspecific competitioneliöyhteisöt15. Life on landselkärangattomatstreamsInvertebratesEnvironmental niche modellingPhenotypeHabitat1181 Ecology evolutionary biologyBiological dispersalAnimal Science and Zoologybody sizeleviäminen
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Analysis of trematode parasite communities in fish eye lenses by pyrosequencing of naturally pooled DNA.

2011

Infections by multiple parasite species are common in nature and have important consequences for between species interactions and coevolutionary dynamics with the host populations. For example ecological and evolutionary factors underlying the structure of parasite communities determine the range of hosts a parasite can infect and set the basis for both evolution of host defences and parasite virulence as well as management of diseases. Studies investigating these factors have been facilitated in the recent past by genetic methods which surmount difficulties of traditional morphological taxonomy in identifying individual parasite species. Here we take a step further and present a novel meth…

0106 biological sciencesMicrobiology (medical)Molecular Sequence DataSnailsZoologyVirulenceTrematode Infections010603 evolutionary biology01 natural sciencesMicrobiologyPolymorphism Single NucleotideHost Specificity03 medical and health sciencesCharadriiformesFish DiseasesReference ValuesDNA Ribosomal SpacerGeneticsParasite hostingAnimals14. Life underwaterMolecular BiologyEcology Evolution Behavior and SystematicsPhylogeny030304 developmental biology0303 health sciencesPrincipal Component AnalysisCommunitybiologyModels Geneticta1183Community structureInterspecific competitionSequence Analysis DNAbiology.organism_classification3. Good healthInfectious DiseasesFreshwater fishPyrosequencingta1181Taxonomy (biology)TrematodaInfection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
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Carvacrol activated biopolymeric foam: An effective packaging system to control the development of spoilage and pathogenic bacteria on sliced pumpkin…

2021

Abstract A commercial biodegradable starch-based polymer (Mater-Bi) was activated with carvacrol to develop a biodegradable and compostable polymer to be used in food packaging. Based on previous tests, carvacrol was added at 20 % weight of foam. MB foams, with and without carvacrol, were tested for their morphological characteristics, mechanical tests and kinetics of carvacrol release under refrigerated storage conditions. Carvacrol slightly increased the porosity of the foams, induced a reduction of the compressive elastic modulus (Ecom) of foamed MB from 6 to ∼ 3.4 MPa and a decrease of the tensile elastic modulus from ∼70 MPa to ∼16.5 MPa. Carvacrol release from the foam at 4 °C was alm…

0106 biological sciencesMicrobiology (medical)Polymers and PlasticsMelonStarchFood spoilageActive packagingBiopolymeric foamsSettore AGR/04 - Orticoltura E FloricolturaSpoilage and pathogenic bacteriamedicine.disease_cause01 natural sciencesAntibacterial propertiesBiomaterialsFood packagingchemistry.chemical_compound0404 agricultural biotechnologyListeria monocytogenesCarvacrol010608 biotechnologymedicineCarvacrolFood scienceSafety Risk Reliability and QualityFood model systemsbiologyChemistrySettore ING-IND/34 - Bioingegneria Industriale04 agricultural and veterinary sciencesbiology.organism_classification040401 food scienceFood packagingSettore ING-IND/22 - Scienza E Tecnologia Dei MaterialiIn vivo activityBacteriaSettore AGR/16 - Microbiologia AgrariaFood ScienceFood Packaging and Shelf Life
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Phylogenetic evidence for hybrid origins of asexual lineages in an aphid species

2003

International audience; Understanding the mode of origin of asexuality is central to ongoing debates concerning the evolution and maintenance of sexual reproduction in eukaryotes. This is because it has profound consequences for patterns of genetic diversity and ecological adaptability of asexual lineages, hence on the outcome of competition with sexual relatives both in short and longer terms. Among the possible routes to asexuality, hybridization is a very common mechanism in animals and plants. Aphids present frequent transitions from their ancestral reproductive mode (cyclical parthenogenesis) to permanent asexuality, but the mode of origin of asexual lineages is generally not known bec…

0106 biological sciencesMitochondrial DNAHeterozygoteEvolution of sexual reproduction[SDV]Life Sciences [q-bio]Parthenogenesis010603 evolutionary biology01 natural sciencesAsexualityRhopalosiphum padiEvolution Molecular03 medical and health sciencesReproduction AsexualGeneticsAnimalsCluster AnalysisAllele sequence divergenceHybridizationPhylogenyPolymorphism Single-Stranded ConformationalEcology Evolution Behavior and Systematics030304 developmental biologyGeneticsAphidLikelihood Functions0303 health sciencesbiologyPhylogenetic treeModels GeneticParthenogenesisSequence Analysis DNAbiology.organism_classificationNuclear DNASexual reproductionEvolution of sexAphids[SDE]Environmental SciencesHybridization GeneticGeneral Agricultural and Biological SciencesMicrosatellite Repeats
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Transcriptome and proteome analysis of Pinctada margaritifera calcifying mantle and shell: focus on biomineralization

2010

Abstract Background The shell of the pearl-producing bivalve Pinctada margaritifera is composed of an organic cell-free matrix that plays a key role in the dynamic process of biologically-controlled biomineralization. In order to increase genomic resources and identify shell matrix proteins implicated in biomineralization in P. margaritifera, high-throughput Expressed Sequence Tag (EST) pyrosequencing was undertaken on the calcifying mantle, combined with a proteomic analysis of the shell. Results We report the functional analysis of 276 738 sequences, leading to the constitution of an unprecedented catalog of 82 P. margaritifera biomineralization-related mantle protein sequences. Component…

0106 biological sciencesModels MolecularProteomicsProteome[SDV]Life Sciences [q-bio]Proteomics01 natural sciencesContig MappingMantle (mollusc)MargaritiferaIn Situ HybridizationGeneticsExpressed Sequence Tags0303 health sciencesMineralsbiologyPinctada margaritifera[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ProteomeBiotechnologyResearch Articlelcsh:QH426-470Sequence analysislcsh:BiotechnologyMolecular Sequence Data010603 evolutionary biology03 medical and health sciencesCalcification Physiologiclcsh:TP248.13-248.65[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]GeneticsAnimals[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyAmino Acid SequencePinctadaRNA Messenger[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/Biomaterials030304 developmental biologyBase SequenceSequence Homology Amino AcidGene Expression ProfilingAnimal StructuresMolecular Sequence AnnotationSequence Analysis DNAbiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/Biomaterialslcsh:GeneticsGene Expression RegulationEvolutionary biologyPinctadaBiomineralization
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Molecular Bases for Sensitivity to Tubulin-Binding Herbicides in Green Foxtail

2004

Abstract We investigated the molecular bases for resistance to several classes of herbicides that bind tubulins in green foxtail (Setaria viridis L. Beauv.). We identified two α- and two β-tubulin genes in green foxtail. Sequence comparison between resistant and sensitive plants revealed two mutations, a leucine-to-phenylalanine change at position 136 and a threonine-to-isoleucine change at position 239, in the gene encoding α2-tubulin. Association of mutation at position 239 with herbicide resistance was demonstrated using near-isogenic lines derived from interspecific pairings between green foxtail and foxtail millet (Setaria italica L. Beauv.), and herbicide sensitivity bioassays combine…

0106 biological sciencesModels MolecularSetariaPhysiologyProtein ConformationMolecular Sequence DataSetaria PlantDrug ResistancePlant Sciencemedicine.disease_cause01 natural sciencesTubulin binding[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciencesFocus Issue on the Plant CytoskeletonSpecies SpecificityTubulin[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants geneticsBotanyGeneticsmedicineBioassayAmino Acid SequenceGeneCross-resistancePhylogenyComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesMutationbiologyBase SequenceSetaria viridisHerbicidesbiology.organism_classificationBiochemistryFoxtail010606 plant biology & botanyProtein Binding
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Morphological modularity and assessment of developmental processes within the vole dental row (Microtus arvalis, Arvicolinae, Rodentia).

2009

10 pages; International audience; Knowledge of mammalian tooth formation is increasing, through numerous genetic and developmental studies. The prevalence of teeth in fossil remains has led to an intensive description of evolutionary patterns within and among lineages based on tooth morphology. The extent to which developmental processes have influenced tooth morphologies and therefore the role of these processes in these evolutionary patterns are nonetheless challenging. Recent methodological advances have been proposed allowing the inference of developmental processes from adult morphologies and the characterization of the degree of developmental integration/modularity of morphological tr…

0106 biological sciencesMolarMorphogenesisZoology[SDV.BID]Life Sciences [q-bio]/Biodiversity010603 evolutionary biology01 natural sciencesModularity03 medical and health sciencesstomatognathic systemMorphogenesisAnimals[ SDV.BDD ] Life Sciences [q-bio]/Development BiologyMicrotus[SDV.BDD]Life Sciences [q-bio]/Development BiologyEcology Evolution Behavior and Systematics030304 developmental biology[ SDV.BID ] Life Sciences [q-bio]/Biodiversity0303 health sciencesbiologyArvicolinaebiology.organism_classificationTooth morphologyArvicolinaeVoleToothDevelopmental Biology
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When less means more: evolutionary and developmental hypotheses in rodent molars.

2012

10 pages; International audience; Tooth number in rodents is an example of reduction in evolution. All rodents have a toothless diastema lacking canine and most premolars present in most other mammals. Whereas some rodent lineages retained one premolar (p4), many others lost it during evolution. Recently, an 'inhibitory cascade' developmental model (IC) has been used to predict how the first molar (m1) influences the number and relative sizes of the following distal molars (m2 and m3). The model does not, however, consider the presence of premolars, and here we examine whether the premolar could influence and constrain molar proportions during development and evolution. By investigating a l…

0106 biological sciencesMolarRodentmolar proportionsRodentiapremolarBiologyMacroevolutionModels Biological010603 evolutionary biology01 natural sciencesMandibular first molar03 medical and health sciencesstomatognathic systembiology.animalevolutionPremolarmedicineAnimalsdevelopmentEcology Evolution Behavior and Systematics[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology030304 developmental biology0303 health sciencesmacroevolutionDentition[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Anatomyinhibitory cascadeBiological EvolutionMolar[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]medicine.anatomical_structureEvolutionary biologyrodentsDiastemaLinear ModelsBasal phenotype[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/Paleontology
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