Search results for "Molecular sequence"

showing 10 items of 1972 documents

Creating a conditional mutation of Wnt-1 by antisense transgenesis provides evidence that Wnt-1 is not essential for spermatogenesis.

1993

We have used mice transgenic for an antisense construct for Wnt-1 to study the role of this gene in post-meiotic sperm development. The human PGK-2 promoter provided levels of Wnt-1 antisense mRNA in testes in 5 transgenic lines greatly in excess of Wnt-1 mRNA concentrations, and Wnt-1 mRNA levels were greatly decreased in the lines, by 98% in three of them. There was a general correlation between copy number of the insert, levels of antisense RNA, and decreases in mRNA. There was little effect of the antisense transgene on fertility or testicular histology suggesting that normal levels of Wnt-1 transcript are not essential for spermatogenesis.

MaleTransgeneRecombinant Fusion ProteinsMolecular Sequence DataMice Inbred StrainsMice TransgenicWnt1 ProteinBiologyMiceProto-Oncogene ProteinsGene expressionTestisGeneticsAnimalsRNA AntisenseRNA MessengerPromoter Regions GeneticSpermatogenesisRegulation of gene expressionMice KnockoutMessenger RNABase SequenceWnt signaling pathwayRNACell BiologyZebrafish ProteinsMolecular biologyAntisense RNATransgenesisMice Inbred C57BLWnt ProteinsPhosphoglycerate KinaseFertilityGene Expression RegulationOrgan SpecificityDevelopmental BiologyDevelopmental genetics
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Anaplastic Wilms' tumour, a subtype displaying poor prognosis, harbours p53 gene mutations

1994

The genetics of Wilms' tumour (WT), a paediatric malignancy of the kidney, is complex. Inactivation of the tumour suppressor gene, WT1, is associated with tumour aetiology in approximately 10-15% of WTs. Chromosome 17p changes have been noted in cytogenetic studies of WTs, prompting us to screen 140 WTs for p53 mutations. When histopathology reports were available, p53 mutations were present in eight of eleven anaplastic WTs, a tumour subtype associated with poor prognosis. Amplification of MDM2, a gene whose product binds and sequesters p53, was excluded. Our results indicate that p53 alterations provide a molecular marker for anaplastic WTs.

MaleTumor suppressor geneDNA Mutational AnalysisMolecular Sequence DataGene mutationBiologyMalignancymedicine.disease_causePolymerase Chain ReactionWilms TumorProto-Oncogene ProteinsGeneticsmedicineHumansAmino Acid SequenceGeneAllelesMutationBase SequencefungiNuclear ProteinsCell DifferentiationProto-Oncogene Proteins c-mdm2Wilms' tumorGenes p53Prognosismedicine.diseaseKidney NeoplasmsNeoplasm ProteinsGene Expression Regulation Neoplasticbody regionsGenetic markerbiology.proteinCancer researchMdm2FemaleTumor Suppressor Protein p53Nature Genetics
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A high-fat diet increases l-carnitine synthesis through a differential maturation of the Bbox1 mRNAs.

2013

International audience; l-carnitine is a key molecule in both mitochondrial and peroxisomal lipid metabolisms. l-carnitine is biosynthesized from gamma-butyrobetaine by a reaction catalyzed by the gamma-butyrobetaine hydroxylase (Bbox1). The aim of this work was to identify molecular mechanisms involved in the regulation of l-carnitine biosynthesis and availability. Using 3' RACE, we identified four alternatively polyadenylated Bbox1 mRNAs in rat liver. We utilized a combination of in vitro experiments using hybrid constructs containing the Bbox1 3' UTR and in vivo experiments on rat liver mRNAs to reveal specificities in the different Bbox1 mRNA isoforms, especially in terms of polyadenyla…

MaleUntranslated regionPolyadenylation[ SDV.AEN ] Life Sciences [q-bio]/Food and NutritionMolecular Sequence DataBiologyCell Line03 medical and health scienceschemistry.chemical_compoundBiosynthesisCarnitineAnimalsRNA MessengerRats WistarMolecular BiologyDNA Primers030304 developmental biologychemistry.chemical_classification0303 health sciencesMessenger RNABase SequenceFatty acid metabolism030302 biochemistry & molecular biologyTranslation (biology)Cell BiologyPeroxisomeDietary FatsRatsEnzymeLiverchemistryBiochemistry[SDV.AEN]Life Sciences [q-bio]/Food and Nutrition
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USH3A transcripts encode clarin-1, a four-transmembrane-domain protein with a possible role in sensory synapses.

2002

Usher syndrome type 3 (USH3) is an autosomal recessive disorder characterised by the association of post-lingual progressive hearing loss, progressive visual loss due to retinitis pigmentosa and variable presence of vestibular dysfunction. Because the previously defined transcripts do not account for all USH3 cases, we performed further analysis and revealed the presence of additional exons embedded in longer human and mouse USH3A transcripts and three novel USH3A mutations. Expression of Ush3a transcripts was localised by whole mount in situ hybridisation to cochlear hair cells and spiral ganglion cells. The full length USH3A transcript encodes clarin-1, a four-transmembrane-domain protein…

MaleUsher syndromeMolecular Sequence DataBiologyPhotoreceptor cellSynapse03 medical and health sciencesExonMice0302 clinical medicineSequence Analysis ProteinRetinitis pigmentosaHair Cells Auditoryotorhinolaryngologic diseasesGeneticsmedicineAnimalsHumansAmino Acid SequenceGenetics (clinical)Spiral ganglionIn Situ HybridizationPhylogeny030304 developmental biology0303 health sciencesGene Expression ProfilingChromosome MappingMembrane ProteinsSequence Analysis DNAmedicine.diseaseCell biologyPedigreeTransmembrane domainmedicine.anatomical_structureMutationSynapsesFemalesense organsHair cellCalcium ChannelsSequence Alignment030217 neurology & neurosurgeryEuropean journal of human genetics : EJHG
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Intraspecific variation within Phlebotomus sergenti Parrot (1917) (Diptera: Psychodidae) based on mtDNA sequences in Islamic Republic of Iran.

2007

An intraspecific study on the morphological and molecular characteristics of Phlebotomus sergenti s.l., the main vector of Leishmania tropica, was performed on 28 Iranian populations from 11 provinces and a few samples from Greece, Morocco, Lebanon, Turkey, Pakistan, and Syria. Three morphotypes were identified as A, B and C, with some intermediate forms in the samples under investigation. Based on the number of setae and the width of basal lobe of coxite, differences between A and B morphotypes were highly significant. Excluding one unusual haplotype, sequence analysis of ∼439 bp of mtDNA (a fragment of cytochromeB gene, tRNA for serine gene, and a fragment of NADH1 gene) revealed a 6–7% g…

MaleVeterinary (miscellaneous)Molecular Sequence DataZoologyLeishmaniasis CutaneousSubspeciesIranDNA MitochondrialPolymerase Chain ReactionGenotypeBotanyAnimalsHumansPhlebotomusPsychodidaebiologyHaplotypeGenetic VariationSequence Analysis DNAbiology.organism_classificationInsect VectorsInfectious DiseasesGenetic distanceSympatric speciationLeishmania tropicaInsect SciencePhlebotomusGenetic structureParasitologyActa tropica
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The gene encoding ganglioside-induced differentiation-associated protein 1 is mutated in axonal Charcot-Marie-Tooth type 4A disease

2001

We identified three distinct mutations and six mutant alleles in GDAP1 in three families with axonal Charcot-Marie-Tooth (CMT) neuropathy and vocal cord paresis, which were previously linked to the CMT4A locus on chromosome 8q21.1. These results establish the molecular etiology of CMT4A (MIM 214400) and suggest that it may be associated with both axonal and demyelinating phenotypes.

Malecongenital hereditary and neonatal diseases and abnormalitiesDNA Mutational AnalysisMolecular Sequence DataMutantMutation MissenseNeural ConductionGenes RecessiveNerve Tissue ProteinsLocus (genetics)BiologyPolymerase Chain ReactionFrameshift mutationCharcot-Marie-Tooth DiseaseGeneticsHumansMissense mutationAge of OnsetAlleleChildFrameshift MutationGeneAllelesGeneticsBrainInfantExonsAnatomyPhenotypeAxonsPedigreeAmino Acid SubstitutionHaplotypesSpinal CordCodon NonsenseSpainChild PreschoolFemaleLod ScoreVocal cord paresisChromosomes Human Pair 8Demyelinating DiseasesNature Genetics
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Full length cDNA of rat RT1.DMa and RT1.DMb and expression of RT1.DM genes in dendritic and Langerhans cells.

1997

MHC encoded DM heterodimers and classical MHC class II complexes meet in an endosomal/lysosomal compartment where DM heterodimers support peptide loading of MHC class II. Studies on peptide loading of rat class II and on peptide persistence in cells of the dendritic lineage prompted us to establish full length cDNA clones coding for the subunits alpha and beta of rat DM molecules as well as a mAb directed against the luminal moiety of the beta subunit. Here we describe the establishment of the first full length cDNA clones of rat RT1.DMa and RT1.DMb. The mode of expression of RT1.DM at the transcript level in bone marrow culture-derived dendritic cells, in Langerhans cells and in a number o…

Maleendocrine systemDNA ComplementaryTranscription Geneticmedicine.drug_classClinical BiochemistryBlotting WesternGenes MHC Class IIMolecular Sequence DataGene ExpressionBone Marrow CellsMonoclonal antibodyMajor histocompatibility complexBiochemistryIslets of LangerhansHistocompatibility AntigensGene expressionmedicineAnimalsAmino Acid SequenceCloning MolecularMolecular BiologyPeptide sequenceCells CulturedMHC class IIbiologyBase SequenceChemistryAntibodies MonoclonalDendritic CellsBlotting NorthernMolecular biologyRatsBlotRats Inbred Lewbiology.proteinBeta proteinAntibodyBiological chemistry
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Molecular characterization of a new adult male putative calycin specific to tergal aphrodisiac secretion in the cockroach Leucophaea maderae

2001

0014-5793 (Print) Journal Article Research Support, Non-U.S. Gov't; Lma-p18 is an epicuticular surface protein specific to the tergal gland aphrodisiac secretion of Leucophaea maderae adult males. Native Lma-p18 was purified and the complete cDNA sequence was determined by RT-PCR using primers based on Edman degradation fragments. Northern blot and in situ hybridization analyses showed that Lma-p18 is expressed exclusively in the anterior part of male tergal gland, which is exposed only during sexual behavior. Sequence analysis indicated that Lma-p18 belongs to the calycin superfamily and is very similar to Lma-p22, the first known male-specific tergal protein in L. maderae. Lma-p18 and Lma…

Maleendocrine systemendocrine system diseasesSequence analysisMolecular Sequence DataBiophysicsSequence HomologyCockroachesIn situ hybridizationBiochemistryExocrine GlandsCockroachStructural Biologybiology.animalComplementary DNAGeneticsAnimalsDevelopmentalSex behaviorAphrodisiacNorthern blotAmino Acid SequenceCloning MolecularMolecular BiologyPeptide sequenceSecretionCockroachSequence Homology Amino AcidbiologyEdman degradationBase SequenceGene Expression Regulation DevelopmentalMolecularCell BiologyTergal glandMolecular biologyCalycinAmino AcidGene Expression RegulationLarvaExocrine Glands/metabolismInsect Proteins/*genetics/*metabolismCockroaches/*physiologyInsect ProteinsFemaleCloning
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Low Levels of Mitochondrial DNA and Symbiont Diversity in the Worldwide Agricultural Pest, the Greenhouse Whitefly Trialeurodes vaporariorum (Hemipte…

2015

Trialeurodes vaporariorum, the greenhouse whitefly, is a cosmopolitan agricultural pest. Little is known about the genetic diversity of T. vaporariorum and the bacterial symbionts associated with this species. Here, we undertook a large phylogeographic study by investigating both the mitochondrial (mt) diversity and the infection status of 38 T. vaporariorum collections from 18 countries around the world. Genetic diversity of T. vaporariorum was studied by analyzing sequence data from the mt cytochrome oxidase I, cytochrome b, and NADH dehydrogenase subunit 5 genes. Maximum-likelihood (ML) phylogeny reconstruction delineated 2 clades characterized by limited sequence divergence: one clade c…

Malefood.ingredientArsenophonusMolecular Sequence DataZoologyTrialeurodesDNA MitochondrialHemipterafoodSpecies SpecificityGenetic variationBotanyGeneticsAnimalssymbiont communitiesSymbiosisMolecular BiologyPhylogenyGenetics (clinical)ta415Likelihood FunctionsGenetic diversityBacteriaBase SequenceModels GeneticbiologyCytochrome bta1184mtDNA polymorphismGenetic VariationGreenhouse whiteflygenetic diversitySequence Analysis DNAbiology.organism_classificationPhylogeographyta1181Multilocus sequence typingFemaleWolbachiaArsenophonusAnimal DistributionBiotechnologyJournal of Heredity
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Presence of viruses in wild eels Anguilla anguilla L, from the Albufera Lake (Spain)

2014

A virological analysis was conducted on wild eels from the Albufera Lake (Spain). A total of 179 individuals at different growth stages were collected in two different surveys (2004 and 2008). Presence of anguillid herpesvirus (AngHV-1), aquabirnavirus and betanodavirus was confirmed by PCR procedures in both surveys, although the number of detections was clearly higher in 2008 (83% of the eels analysed resulted positive for virus presence). AngHV-1 was the viral agent most frequently detected, followed by aquabirnaviruses. Betanodaviruses were detected by the first time in wild eels, and although the detections were only made by nested PCR, high percentage of positives were achieved. In ad…

Malefood.ingredientVeterinary (miscellaneous)Molecular Sequence DataReassortmentBetanodavirusAquatic ScienceBiologyPolymerase Chain ReactionVirusFish DiseasesViral ProteinsRNA Virus InfectionsfoodGenotypeAnimalsRNA VirusesAquabirnavirusPhylogenyPhylogenetic treeDNA VirusesSequence Analysis DNAAnguillabiology.organism_classificationVirologyDNA Virus InfectionsAnguillid herpesvirusSpainFemaleSeasonsNested polymerase chain reactionJournal of Fish Diseases
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