Search results for "Molecules"
showing 10 items of 1147 documents
Electronic structure of polysilanes: influence of substitution and conformation
1993
Abstract The valence effective Hamiltonian (VEH) quantum-chemical approach is used to investigate the electronic properties of polysilane. The valence band structure calculated for this fully saturated polymer is analyzed in terms of orbital contributions and compared to that of the closely related carbon polymer, polyethylene. The effects of alkyl substitution and silicon backbone conformation are studied by elucidating the modifications that these structural changes induce on the electronic valence band structure of all-trans unsubstituted polysilane. The VEH results predict a decrease of the band gap upon alkyl substitution and on going from helical to all-trans conformations.
Atomistic Molecular Dynamics Simulations of the Static and Dynamic Properties of a Polyethylene Melt
1999
I will discuss in this work the atomistic modelling of polymer melts using Molecular Dynamics (MD) simulations. After a general introduction into the problems one faces in the computer simulation of polymers in general and the atomistic simulations in particular, I will present some recent work on the atomistic modelling of an — C 100 H 202 melt,i.e. short chain polyethylene (PE). The aim of this work is to establish a quantitatively validated atomistic model which then can be used in two directions. One direction is the generation of input for the calibration of parameters in coarse-grained models, which in turn can be used to simulate the polymer under investigation over a much broader te…
Entropy theory and glass transition: A test by Monte Carlo simulation
1997
This article reviews the results of a test of the Gibbs-DiMarzio theory by Monte Carlo Simulation. The simulation employed the bond-fluctuation model on a simple cubic lattice. This model incorporates two kinds of interactions: the excluded volume interaction among all monomers of the melt and an internal energy of the chains, which favors large bonds and makes the chains stiffen with decreasing temperature. The stiffening of the chains leads to an increase of their volume requirements, which competes with the packing constraints at low temperatures. This competition strongly slows down the structural relaxation of the melt and induces the glassy behavior. The model therefore takes into acc…
Allylammonium hydrogen oxalate hemihydrate
2014
In the title hydrated molecular salt, C3H8N+·C2HO4−·0.5H2O, the water O atom lies on a crystallographic twofold axis. The C=C—C—N torsion angle in the cation is 2.8 (3)° and the dihedral angle between the CO2and CO2H planes in the anion is 1.0 (4)°. In the crystal, the hydrogen oxalate ions are linked by O—H...O hydrogen bonds, generating [010] chains. The allylammonium cations bond to the chains through N—H...O and N—H...(O,O) hydrogen bonds. The water molecule accepts two N—H...O hydrogen bonds and makes two O—H...O hydrogen bonds. Together, the hydrogen bonds generate (100) sheets.
Temperature effects on counterion binding to spherical polyelectrolytes: the charge-discharge transition of lignosulfonate
1995
Abstract The effect of temperature on the effective charge numbers and diffusion coefficients of polyelectrolytes has not nobee dealth with in many studies. The present study concerns the temperature behavior of lignosulfonate. Lignosulfonate is a polydisperse polyelectrolyte whose molecules are compact spheres in aqueous solutions. One of its most remarkable properties is that is loses its charge in 0.1 M NaCl aqueous solution at about 40°C. In order to explain this charge-discharge transition, a theory for ion binding to spherical polyelectrolytes based on the relative population of two hydration states of the charged groups is presented. The water molecules adjacent to the charged groups…
Conformational studies of bottle-brush polymers absorbed on a flat solid surface.
2010
The adsorption of a bottle-brush polymer end-grafted with one chain end of its backbone to a flat substrate surface is studied by Monte Carlo simulation of a coarse-grained model, that previously has been characterized in the bulk, assuming a dilute solution under good solvent conditions. Applying the bond fluctuation model on the simple cubic lattice, we vary the backbone chain length $N_b$ from $N_b=67$ to $N_b = 259$ effective monomeric units, the side chain length $N$ from N=6 to N=48, and the grafting density $\sigma=1$, i.e., parameters that correspond well to the experimentally accessible range. When the adsorption energy strength $\epsilon$ is varied, we find that the adsorption tra…
Monte Carlo methods for polymer chains in two - dimensional geometries (polymers at surfaces and interfaces)
1993
Coarse-grained models of polymers at interfaces can be defined such that their treatment by Monte Carlo simulation is most convenient and efficient for the problem at hand. This simulation strategy is briefly illustrated with three examples: (1) The orientational ordering of rigid rod-like polymers grafted to a surface, where “table methods” can be used, applying a fine discretization of the angles describing rod orientation. (2) Surface enrichment of one species in a polymer blend is treated by a semi-grand-canonical technique. (3) The number of configurations and structure of a star polymer attached with its center to a wall is studied by a “growth technique” generalizing simple sampling …
Chain linear dimensions in the surface-enriched layer of polymer mixtures
1992
We calculate the mean-square end-to-end distances and mean-square gyration radii using the bond fluctuation model for a binary polymer blend in the presence of a wall by Monte Carlo simulation. In the bulk, the size of the minority, low-concentration polymer species is compressed compared to the majority one. In the vicinity of the wall, where the minority polymer concentration is enriched due to attraction from the wall, the dimensions of the two types of polymers are approximately equal and are essentially the same as in an athermal polymer melt. Thus, the geometric constraint is more important to the structure of the polymers than the polymer-polymer and polymer-wall interactions.
Dynamics of macromolecules grafted in spherical brushes under good solvent conditions
2013
Spherical polymer brushes have a structure intermediate between star polymers and polymer brushes on flat substrates, and are important building blocks of polymer nanoparticles. Molecular dynamics simulations are presented for isolated spherical polymer brushes under good solvent conditions, varying the grafting density as well as the chain length, using a coarse-grained bead-spring model of flexible chains. We complement previous work on the static properties of the same model by analyzing the chain dynamics, studying the motions of monomers in relation to their position along the grafted chains, and extract suitable relaxation times. A qualitative discussion in terms of the Rouse model is…
Toward Understanding the Photochemistry of Photoactive Yellow Protein: A CASPT2/CASSCF and Quantum Theory of Atoms in Molecules Combined Study of a M…
2009
Photochemical processes that take place in biological molecules have become an increasingly important research topic for both experimentalists and theoreticians. In this work, we report the reaction mechanism of a model of the photoactive yellow protein (PYP) chromophore in vacuo. The results obtained here, using a strategy based on the simultaneous use of the minimum energy path concept and the quantum theory of atoms in molecules applied to this excited state process, suggest a possible way in which the protein could increase the efficiency of the reaction. The role played by other electronic states of the same and different spin multiplicities in the reaction process is also analyzed, wi…