Search results for "NDI"

showing 10 items of 20275 documents

Functional characterization of the chaperon-like protein Cdc48 in cryptogein-induced immune response in tobacco

2017

SPEIPMUBINRASUPDATDOCT; Cdc48, a molecular chaperone conserved in different kingdoms, is a member of the AAA+ family contributing to numerous processes in mammals including proteins quality control and degradation, vesicular trafficking, autophagy and immunity. The functions of Cdc48 plant orthologues are less understood. We previously reported that Cdc48 is regulated by S-nitrosylation in tobacco cells undergoing an immune response triggered by cryptogein, an elicitin produced by the oomycete Phytophthora cryptogea. Here, we inv estigated the function of NtCdc48 in cryptogein signalling and induced hypersensitive-like cell death. NtCdc48 was found to accumulate in elicited cells at both th…

0106 biological sciences0301 basic medicineProgrammed cell deathPhysiologyImmunoprecipitationNitrosation[SDV]Life Sciences [q-bio]PopulationPlant ScienceBiologyBioinformatics01 natural sciencesdefence responsescryptogeinFungal Proteins03 medical and health sciencesImmune systemGene Expression Regulation PlantValosin Containing ProteinPlant CellsTobaccoRNA MessengereducationPlant ProteinsRegulation of gene expressioneducation.field_of_studyFungal protein[ SDV ] Life Sciences [q-bio]AutophagyElicitinCell biology030104 developmental biologycell deathChromatography GelCdc48 partnersNtCdc48Protein Binding010606 plant biology & botany
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The Histone Marks Signature in Exonic and Intronic Regions Is Relevant in Early Response of Tomato Genes to Botrytis cinerea and in miRNA Regulation

2020

Research into the relationship between epigenetic regulation and resistance to biotic stresses provides alternatives for plant protection and crop improvement. To unravel the mechanisms underlying tomato responses to Botrytis cinerea, we performed a chromatin immunoprecipitation (ChIP) analysis showing the increase in H3K9ac mark along the early induced genes SlyDES, SlyDOX1, and SlyLoxD encoding oxylipin-pathway enzymes, and SlyWRKY75 coding for a transcriptional regulator of hormonal signaling. This histone mark showed a more distinct distribution than the previously studied H3K4me3. The RNAPol-ChIP analysis reflected the actual gene transcription associated with increased histone modific…

0106 biological sciences0301 basic medicinePseudomonas syringaeMiRNA bindingPlant ScienceBiology<i>pseudomonas syringae</i>01 natural sciencesTomato03 medical and health sciencesBotrytis cinerealcsh:BotanyTomàquetsTranscriptional regulationEpigeneticsGeneEcology Evolution Behavior and SystematicsBotrytis cinereamiRNAGeneticsEcologyHistone modificationsfungifood and beveragesFongs patògensbiology.organism_classificationChromatin immunoprecipitationlcsh:QK1-989030104 developmental biologyHistone<i>botrytis cinerea</i>biology.proteinRNAH3K4me3EpigeneticsChromatin immunoprecipitation010606 plant biology & botany
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Love at first sniff: a spermatophore-associated pheromone mediates partner attraction in a collembolan species

2017

Mate choice is essential in most animals, as a good choice of mating partner largely determines reproductive success. Much evidence shows that olfactory cues play an important role in mate choice. However, the integration of chemical, visual and acoustic cues, often used when both partners meet, makes it hard to test whether olfaction alone can mediate reproductive decisions. Interestingly, several invertebrates have adopted a mating system where males deposit their sperm (packed in spermatophores) in the environment for females to pick up with no visual contact between the sexes. In this case the male cue is conveyed by the spermatophore only. Earlier studies on a species with indirect spe…

0106 biological sciences0301 basic medicineReproductive successEcologyspringtailsspermatophoreZoologysex pheromoneBiologyMating system010603 evolutionary biology01 natural sciencesAttraction03 medical and health sciences030104 developmental biologyMate choiceSex pheromoneSpermatophoreindirect sperm transferPheromoneAnimal Science and ZoologyMatingEcology Evolution Behavior and Systematicssexual chemical communicationAnimal behaviour
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Aging parasites produce offspring with poor fitness prospects.

2017

Senescing individuals have poor survival prospects and low fecundity. They can also produce offspring with reduced survival and reproductive success. We tested the effect of parental age on the performance of descendants in the nematode Heligmosomoides polygyrus , an intestinal parasite of rodents. We found that offspring of senescing worms had reduced within-host survival and reduced egg shedding over the first month post-infection compared with offspring produced by young parents. These results suggest that declining offspring quality is a component of senescence in parasitic nematodes and might have evolutionary consequences for the optimal schedule of age-dependent investment into repr…

0106 biological sciences0301 basic medicineSenescence[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyTime FactorssenescenceOffspringLongevityIntestinal parasiteZoologyHeligmosomoides polygyrusBiologymedicine.disease_cause010603 evolutionary biology01 natural sciences03 medical and health sciencesMicemedicine[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimals[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyStrongylida InfectionsEvolutionary BiologyNematospiroides dubius[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologyoffspring fitnessReproductive successReproductionYoung parentsFecunditybiology.organism_classificationAgricultural and Biological Sciences (miscellaneous)infection030104 developmental biologyNematodeFertilityImmunologyFemaleHeligmosomoides polygyrus[SDE.BE]Environmental Sciences/Biodiversity and EcologyGeneral Agricultural and Biological Sciencesparental age[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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ß-COP mutants show specific high sensitivity to chloride ions.

2021

Coat Protein I (COPI) consists of a complex (coatomer) formed by seven subunits (α-, β-, β’-, γ-, δ-, ε-, and ζ-COP) that is recruited to Golgi membranes to form vesicles that shuttle from the Golgi apparatus to the ER and between Golgi stacks. Recently, it has been described that loss of function mutants of the two Arabidopsis β-COP genes, β1-COP and β2-COP, showed increased sensitivity to salt stress (NaCl). Using a mixture of either Na(+) or Cl(−) salts, we have now found that β-COP mutants are specifically and highly sensitive to chloride ions.

0106 biological sciences0301 basic medicineShort CommunicationMutantArabidopsisSalt (chemistry)Plant ScienceBiology01 natural sciencesChlorideCoatomer Protein03 medical and health sciencessymbols.namesakeChloridesArabidopsismedicinechemistry.chemical_classificationIonsVesicleCOPIGolgi apparatusbiology.organism_classificationhumanitiesProtein Subunits030104 developmental biologyPhenotypechemistryCoatomerMutationsymbolsBiophysics010606 plant biology & botanymedicine.drugProtein BindingPlant signalingbehavior
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Selection of indigenous yeast strains for the production of sparkling wines from native Apulian grape varieties.

2018

We report the first polyphasic characterization of native Saccharomyces cerevisiae in order to select candidate strains for the design of starter cultures tailored for Apulian sparkling wines obtained from local grape variety. In addition, it is the first survey in our region that propose the selection of autochthonous starter cultures for sparkling wine i) including a preliminary tailored genotypic and technological screening, and ii) monitoring analytical contribution during secondary fermentation in terms of volatile compounds (VOCs). Furthermore, we exploit the potential contribute of autochthonous cultures throughout the productive chain, including the possible improvement of base wine…

0106 biological sciences0301 basic medicineSparkling wine production030106 microbiologyWineSaccharomyces cerevisiaeAutochthonous grape varietiesrr01 natural sciencesMicrobiologyInterdelta03 medical and health sciencesStarterSparkling wine010608 biotechnologyVitisFood scienceSelection (genetic algorithm)Fermentation in winemakingWineindigenous yeastsbiologyautochthonous starter culturesfood and beveragesGeneral Medicinebiology.organism_classificationggYeastFermentationFood MicrobiologyFermentationFood ScienceBiotechnologyInternational journal of food microbiology
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Postmating–prezygotic isolation between two allopatric populations of Drosophila montana: fertilisation success differs under sperm competition

2016

This study was funded by the Academy of Finland (grant 250999 to O. A.-H.). Postmating but prezygotic (PMPZ) interactions are increasingly recognized as a potentially important early-stage barrier in the evolution of reproductive isolation. A recent study described a potential example between populations of the same species: single matings between Drosophila montana populations resulted in differential fertilisation success because of the inability of sperm from one population (Vancouver) to penetrate the eggs of the other population (Colorado). As the natural mating system of D. montana is polyandrous (females remate rapidly), we set up double matings of all possible crosses between the sa…

0106 biological sciences0301 basic medicineSpeciationQH301 Biologymedia_common.quotation_subjectreproductive isolationPopulationAllopatric speciationZoologyFertilityBiologyejaculate-ejaculate interaction010603 evolutionary biology01 natural sciencesEjaculate–ejaculate interactionQH30103 medical and health sciencesejaculate–ejaculate interactioneducationSperm competitionEcology Evolution Behavior and SystematicsOriginal ResearchNature and Landscape Conservationmedia_commoneducation.field_of_studyEcologyEcologypostcopulatory sexual selectionDASReproductive isolationMating systemFecunditySpermejaculate tailoring030104 developmental biologyEjaculate tailoring; ejaculate-ejaculate interaction; postcopulatory sexual selection; reproductive isolation; speciationspeciationta1181lajiutuminenEcology and Evolution
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Modelling nonlinear dynamics of Crassulacean acid metabolism productivity and water use for global predictions

2021

Crassulacean acid metabolism (CAM) crops are important agricultural commodities in water-limited environments across the globe, yet modeling of CAM productivity lacks the sophistication of widely used C3 and C4 crop models, in part due to the complex responses of the CAM cycle to environmental conditions. This work builds on recent advances in CAM modeling to provide a framework for estimating CAM biomass yield and water use efficiency from basic principles. These advances, which integrate the CAM circadian rhythm with established models of carbon fixation, stomatal conductance, and the soil-plant-atmosphere continuum, are coupled to models of light attenuation, plant respiration, and bioma…

0106 biological sciences0301 basic medicineStomatal conductanceOpuntia ficus-indicawater use efficiencyPhysiologyPlant ScienceAgricultural engineering01 natural sciencescarbon assimilation03 medical and health sciencesAgaveBiomassWater-use efficiencyPhotosynthesisProductivityTranspirationBiomass (ecology)OpuntiaWaterPlant TranspirationCarbonAgave tequilanaSettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboree030104 developmental biologyNonlinear DynamicsCrassulacean acid metabolismbiomaCrassulacean acid metabolismEnvironmental scienceBiomass partitioningWater use010606 plant biology & botany
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Molecular Responses to Small Regulating Molecules against Huanglongbing Disease

2016

Huanglongbing (HLB; citrus greening) is the most devastating disease of citrus worldwide. No cure is yet available for this disease and infected trees generally decline after several months. Disease management depends on early detection of symptoms and chemical control of insect vectors. In this work, different combinations of organic compounds were tested for the ability to modulate citrus molecular responses to HLB disease beneficially. Three small-molecule regulating compounds were tested: 1) L-arginine, 2) 6-benzyl-adenine combined with gibberellins, and 3) sucrose combined with atrazine. Each treatment contained K-phite mineral solution and was tested at two different concentrations. T…

0106 biological sciences0301 basic medicineSucroseLeavesCitruslcsh:MedicineGene ExpressionSecondary MetabolismPlant ScienceDisaccharidesBiochemistry01 natural sciencesStarchesGene Expression Regulation PlantINFECTIONMedicine and Health SciencesInnatePlant HormonesAmino Acidslcsh:ScienceImmune ResponseGENE-EXPRESSIONMultidisciplinaryNONHOST RESISTANCEbiologyOrganic CompoundsPlant BiochemistryPlant AnatomyChemistryPhenotypeBiochemistryDEFENSE RESPONSESCANDIDATUS-LIBERIBACTER-ASIATICUS; ARABIDOPSIS-THALIANA; NONHOST RESISTANCE; DEFENSE RESPONSES; CITRUS-SINENSIS; GENE-EXPRESSION; INFECTION; PLANTS; IDENTIFICATION; TRANSCRIPTOMEPhysical SciencesHost-Pathogen InteractionsCarbohydrate MetabolismSucrose synthaseAtrazineGibberellinBasic Amino AcidsStarch synthaseSystemic acquired resistanceResearch ArticleCITRUS-SINENSISGeneral Science & TechnologyPhysiologicalImmunologyCarbohydratesCarbohydrate metabolismStressArginine03 medical and health sciencesStress PhysiologicalSettore AGR/07 - Genetica AgrariaGeneticsPLANTSTRANSCRIPTOMESecondary metabolismGenePlant DiseasesIDENTIFICATIONGene Expression Profilinglcsh:ROrganic ChemistryImmunityChemical CompoundsBiology and Life SciencesProteinsPlantBiotic stressCANDIDATUS-LIBERIBACTER-ASIATICUSHormonesGibberellinsImmunity InnateMetabolism030104 developmental biologyGene Expression RegulationARABIDOPSIS-THALIANAbiology.proteinlcsh:Q010606 plant biology & botanyPLOS ONE
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The IM30/Vipp1 C-terminus associates with the lipid bilayer and modulates membrane fusion.

2017

IM30/Vipp1 proteins are crucial for thylakoid membrane biogenesis in chloroplasts and cyanobacteria. A characteristic C-terminal extension distinguishes these proteins from the homologous bacterial PspA proteins, and this extension has been discussed to be key for the IM30/Vipp1 activity. Here we report that the extension of the Synechocystis IM30 protein is indispensable, and argue that both, the N-terminal PspA-domain as well as the C-terminal extension are needed in order for the IM30 protein to conduct its in vivo function. In vitro, we show that the PspA-domain of IM30 is vital for stability/folding and oligomer formation of IM30 as well as for IM30-triggered membrane fusion. In contra…

0106 biological sciences0301 basic medicineVesicle-associated membrane protein 8ChloroplastsLipid BilayersBiophysicsBiology01 natural sciencesBiochemistryMembrane FusionThylakoidsArticle03 medical and health sciencesBacterial ProteinsProtein DomainsIntegral membrane proteinMembranesMembrane transport proteinPeripheral membrane proteinSynechocystisLipid bilayer fusionMembrane ProteinsCell BiologyCell biology030104 developmental biologyMembrane proteinMembrane biogenesisbiology.protein010606 plant biology & botanyMembrane Fusion ActivityProtein BindingBiochimica et biophysica acta. Bioenergetics
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