Search results for "Note"
showing 10 items of 10709 documents
A model-based approach to Spotify data analysis: a Beta GLMM
2020
Digital music distribution is increasingly powered by automated mechanisms that continuously capture, sort and analyze large amounts of Web-based data. This paper deals with the management of songs audio features from a statistical point of view. In particular, it explores the data catching mechanisms enabled by Spotify Web API and suggests statistical tools for the analysis of these data. Special attention is devoted to songs popularity and a Beta model, including random effects, is proposed in order to give the first answer to questions like: which are the determinants of popularity? The identification of a model able to describe this relationship, the determination within the set of char…
Acceleration of short and long DNA read mapping without loss of accuracy using suffix array
2014
HPG Aligner applies suffix arrays for DNA read mapping. This implementation produces a highly sensitive and extremely fast mapping of DNA reads that scales up almost linearly with read length. The approach presented here is faster (over 20 for long reads) and more sensitive (over 98% in a wide range of read lengths) than the current state-of-the-art mappers. HPG Aligner is not only an optimal alternative for current sequencers but also the only solution available to cope with longer reads and growing throughputs produced by forthcoming sequencing technologies.
Preface: Special Issue on Structure in Glassy and Jammed Systems
2016
This special issue presents new developments in our understanding of the role of structure in dynamical arrest and jamming. Articles highlight local geometric motifs and other forms of amorphous order, in experiment, computer simulation and theory.
Migration and students' performance: detecting geographical differences following a curves clustering approach
2020
Students’ migration mobility is the new form of migration: students migrate to improve their skills and become more valued for the job market. The data regard the migration of Italian Bachelors who enrolled at Master Degree level, moving typically from poor to rich areas. This paper investigates the migration and other possible determinants on the Master Degree students’ performance. The Clustering of Effects approach for Quantile Regression Coefficients Modelling has been used to cluster the effects of some variables on the students’ performance for three Italian macro-areas. Results show evidence of similarity between Southern and Centre students, with respect to the Northern ones.
Stochastic model for the epitaxial growth of two-dimensional islands in the submonolayer regime
2016
The diffusion-based growth of islands composed of clusters of metal atoms on a substrate is considered in the aggregation regime. A stochastic approach is proposed to describe the dynamics of island growth based on a Langevin equation with multiplicative noise. The distribution of island sizes, obtained as a solution of the corresponding Fokker-Planck equation, is derived. The time-dependence of island growth on its fractal dimension is analysed. The effect of mobility of the small islands on the growth of large islands is considered. Numerical simulations are in a good agreement with theoretical results.
Polydisperse hard spheres: crystallization kinetics in small systems and role of local structure
2016
We study numerically the crystallization of a hard-sphere mixture with 8\% polydispersity. Although often used as a model glass former, for small system sizes we observe crystallization in molecular dynamics simulations. This opens the possibility to study the competition between crystallization and structural relaxation of the melt, which typically is out of reach due to the disparate timescales. We quantify the dependence of relaxation and crystallization times on density and system size. For one density and system size we perform a detailed committor analysis to investigate the suitability of local structures as order parameters to describe the crystallization process. We find that local…
To make a glass—avoid the crystal
2016
Colloidal model systems allow for a flexible tuning of particle sizes, particle spacings and mutual interactions at constant temperature. Colloidal suspensions typically crystallize as soon as the interactions get sufficiently strong and long-ranged. Several strategies have been successfully applied to avoid crystallization and instead produce colloidal glasses. Most of these amorphous solids are formed at high particle concentrations. This paper shortly reviews experimental attempts to produce amorphous colloidal solids using strategies based on topological, thermodynamic and kinetic considerations. We complement this overview by introducing a (transient) amorphous solid forming in a thoro…
Noise-induced resonance-like phenomena in InP crystals embedded in fluctuating electric fields
2016
We explore and discuss the complex electron dynamics inside a low-doped n-type InP bulk embedded in a sub-THz electric field, fluctuating for the superimposition of an external source of Gaussian correlated noise. The results presented in this study derive from numerical simulations obtained by means of a multi-valley Monte Carlo approach to simulate the nonlinear transport of electrons inside the semiconductor crystal. The electronic noise characteristics are statistically investigated by calculating the correlation function of the velocity fluctuations, its spectral density and the integrated spectral density, i.e. the total noise power, for different values of both amplitude and frequenc…
An Extended Filament Based Lamellipodium Model Produces Various Moving Cell Shapes in the Presence of Chemotactic Signals
2015
The Filament Based Lamellipodium Model (FBLM) is a two-phase two-dimensional continuum model, describing the dynamcis of two interacting families of locally parallel actin filaments (C.Schmeiser and D.Oelz, How do cells move? Mathematical modeling of cytoskeleton dynamics and cell migration. Cell mechanics: from single scale-based models to multiscale modeling. Chapman and Hall, 2010). It contains accounts of the filaments' bending stiffness, of adhesion to the substrate, and of cross-links connecting the two families. An extension of the model is presented with contributions from nucleation of filaments by branching, from capping, from contraction by actin-myosin interaction, and from a pr…
The distribution of velocities in an ensemble of accelerated particles on a surface
2016
An ensemble of particles diffusing with acceleration on a surface is considered as a 2D billiard system. The process of the finite-time diffusion of particles is studied using the balance equation. The probability distribution functions of the velocity and lifetime of particles are obtained analytically and by means of numerical simulations. A thermodynamic interpretation of the process is discussed. The effective temperature and entropy obey the relationship for an ideal gas.