Search results for "Nuclear matrix"

showing 10 items of 53 documents

Fascinating puzzle called double beta decay

2019

The question of whether neutrinos are Majorana or Dirac particles and what are their average masses remains one of the most fundamental problems in physics today. Observation of neutrinoless double beta decay (0νββ) would verify the Majorana nature of the neutrino and constrain the absolute scale of the neutrino mass spectrum. The inverse half-life for 0νββ-decay is given by the product of a phase space factor (PSF), a nuclear matrix element (NME), which both rely on theoretical description, and a function f containing the physics beyond the standard model. Recent calculations of PSF and NME will be reviewed together with comparison to other available results. These calculations serve the p…

PhysicsParticle physicsDirac (video compression format)Physics beyond the Standard ModelHigh Energy Physics::Phenomenologyneutriinotdouble beta decaynuclear matrix elementshiukkasfysiikkaMAJORANADouble beta decayPhase spaceMass spectrumHigh Energy Physics::ExperimentNeutrinoydinfysiikkaAbsolute scale
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Proteome-Wide Characterization of the RNA-Binding Protein RALY-Interactome Using the in Vivo-Biotinylation-Pulldown-Quant (iBioPQ) Approach

2013

RALY is a member of the heterogeneous nuclear ribonucleoproteins, a family of RNA-binding proteins generally involved in many processes of mRNA metabolism. No quantitative proteomic analysis of RALY-containing ribonucleoparticles (RNPs) has been performed so far, and the biological role of RALY remains elusive. Here, we present a workflow for the characterization of RALY's interaction partners, termed iBioPQ, that involves in vivo biotinylation of biotin acceptor peptide (BAP)-fused protein in the presence of the prokaryotic biotin holoenzyme synthetase of BirA so that it can be purified using streptavidin-coated magnetic beads, circumventing the need for specific antibodies and providing e…

ProteomeRecombinant Fusion ProteinsMolecular Sequence DataBiotinRNA-binding proteinBiologyHeterogeneous ribonucleoprotein particleProteomicsPoly(A)-Binding Protein IBiochemistryInteractomeELAV-Like Protein 103 medical and health scienceschemistry.chemical_compound0302 clinical medicineNuclear Matrix-Associated ProteinsBiotinProtein Interaction MappingHumansCarbon-Nitrogen LigasesAmino Acid SequenceProtein Interaction MapsPeptide sequence030304 developmental biology0303 health sciencesEscherichia coli ProteinsHeterogeneous-Nuclear Ribonucleoprotein Group CRNA-Binding ProteinsGeneral ChemistryRepressor ProteinsHEK293 CellsELAV ProteinsGene Expression RegulationBiochemistrychemistryProtein Biosynthesis030220 oncology & carcinogenesisBiotinylationProteomeBiological AssayStreptavidinHeLa CellsProtein BindingJournal of Proteome Research
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The M4 transitions of isomeric states

2015

Tässä pro gradu -tutkielmassa tutkitaan isomeeristen tilojen magneettisten M4-gammasiirtymien redusoituja matriisielementtejä. Tutkittavat siirtymät ovat venyneitä M4-siirtymiä kaksoisbeetahajoamisten massa-alueilla A=85-115 ja A=135-143. Tutkielman tarkoituksena on verrata kokeellisia ydinmatriisielementtejä kvasihiukkasmatriisielementteihin ja MQPM-teorian avulla laskettuihin matriisielementteihin. Kokeelliset matriisielementi lasketaan kokeellisesti määritettyjen arvojen avulla ja kvasihiukkas- sekä MQPM-matriisielementit määritetään tietokoneohjelmien avulla. Kokeellisten ja kvasihiukkasmatriisielementtien välinen suhde osoittautui olevan noin 0,29 ja kokeellisten ja MQPM-matriisielemen…

QRPA theoryElectromagnetic transitionsBCS theoryMQPM theorysähkömagnetisminuclear matrix elementsM4 transition
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Association of AUUUA-binding Protein with A + U-rich mRNA during nucleo-cytoplasmic transport

1992

Resealed nuclear envelope (NE) vesicles from rat liver containing entrapped exogenous RNA were used to study the effect of adenosine+uridine binding factor (AUBF), present in cytosolic cell extracts, on ATP-dependent transport of A+U-rich RNA (AU+RNA) and A+U-free RNA (AU-RNA) across the NE. This factor specifically binds to A+U-rich sequences present in the 3' untranslated regions of lymphokine and cytokine mRNAs, containing overlapping AUUUA boxes (granulocyte-macrophage colony stimulating factor, interleukin-3). Addition of AUBF to the extravesicular compartment markedly increased the efflux of the in vitro transcribed, capped and polyadenylated AU+ RNAs. Export of entrapped AU- control …

Untranslated regionCytoplasmAdenosineTranscription GeneticPolyadenylationNuclear EnvelopeMolecular Sequence DataRNA-binding proteinBiologyCell LineStructural BiologyTranscription (biology)EndoribonucleasesAnimalsHumansNuclear MatrixRNA MessengerBinding siteNuclear export signalUridineMolecular BiologyCell NucleusMessenger RNABinding SitesBase SequenceGranulocyte-Macrophage Colony-Stimulating FactorInterferon-alphaRNA-Binding ProteinsRNAMolecular biologyRatsKineticsLiverRibonucleoproteinsInterleukin-3Carrier ProteinsPlasmidsPolyribonucleotidesProtein BindingJournal of Molecular Biology
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Myotonic dystrophy associated expanded CUG repeat muscleblind positive ribonuclear foci are not toxic to Drosophila

2005

Myotonic dystrophy type 1 is an autosomal dominant disorder associated with the expansion of a CTG repeat in the 3 0 untranslated region (UTR) of the DMPK gene. Recent data suggest that pathogenesis is predominantly mediated by a gain of function of the mutant transcript. In patients, these expanded CUG repeat-containing transcripts are sequestered into ribonuclear foci that also contain the muscleblind-like proteins. To provide further insights into muscleblind function and the pathogenesis of myotonic dystrophy, we generated Drosophila incorporating CTG repeats in the 3 0 -UTR of a reporter gene. As in patients, expanded CUG repeats form discrete ribonuclear foci in Drosophila muscle cell…

Untranslated regioncongenital hereditary and neonatal diseases and abnormalitiesRNA StabilityProtein Serine-Threonine KinasesBiologyMyotonic dystrophyMyotonin-Protein KinaseGeneticsmedicineAnimalsHumansMyotonic Dystrophy3' Untranslated RegionsMolecular BiologyGeneGenetics (clinical)GeneticsRNAGeneral MedicineNuclear matrixbiology.organism_classificationmedicine.diseaseCell biologyRNA silencingDrosophila melanogasterRNA splicingDrosophila melanogasterTrinucleotide Repeat ExpansionHuman Molecular Genetics
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Modulation of Nuclear Matrix-associated 2′,5′-Oligoadenylate Metabolism and Ribonuclease L Activity in H9 Cells by Human Immunodeficiency Virus

1989

Human T cells (H9), infected with the HTLV-IIIB strain of the human immunodeficiency virus (HIV-1), have been used to study the alteration of 2',5'-oligoadenylate [2'-5')A) metabolism in relation to virus production. The synthesis of (2'-5')A was determined to proceed in close association with the nuclear matrix. After HIV infection the (2'-5')A synthetase activity increased from 1.1 to 1.5 pmol of (2'-5')A synthesized/100 micrograms of nuclear matrix protein (during a 3-h in vitro incubation period) to 8.2 pmol at day 3 after infection. Then the activity dropped to the initial values. In non-infected H9 cells the (2'-5')A synthetase activity remained unchanged. Simultaneously with the decr…

biologyRNase P2'-5'-OligoadenylateEndoribonucleaseCell BiologyNuclear matrixBiochemistryVirologyVirusCell culturebiology.proteinRibonucleaseMolecular BiologyRibonuclease LJournal of Biological Chemistry
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0νββ and 2νββ nuclear matrix elements in the interacting boson model with isospin restoration

2015

We introduce a method for isospin restoration in the calculation of nuclear matrix elements (NMEs) for 0νββ and 2νββ decay within the framework of the microscopic interacting boson model (IBM-2). With this method, we calculate the NMEs for all processes of interest in 0νβ−β− and 2νβ−β− and in 0νβ+β+, 0νECβ+, R0νECEC, 2νβ+β+, 2νECβ+, and 2νECEC. With this method, the Fermi matrix elements for 2νββ vanish, and those for 0νββ are considerably reduced. peerReviewed

double beta decaynuclear matrix elements
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Neutrino-nuclear responses for astro-neutrinos, single beta decays and double beta decays

2019

Neutrino–nuclear responses associated with astro-neutrinos, single beta decays and double beta decays are crucial in studies of neutrino properties of interest for astro-particle physics. The present report reviews briefly recent studies of the neutrino–nuclear responses from both experimental and theoretical points of view in order to obtain a consistent understanding of the many facets of the neutrino–nuclear responses. Subjects discussed in this review include (i) experimental studies of neutrino–nuclear responses by means of single beta decays, charge-exchange nuclear reactions, muon- photon- and neutrino–nuclear reactions, and nucleon-transfer reactions, (ii) implications of and discus…

double beta decaysPhysics::Instrumentation and Detectorssingle beta decaysastrofysiikkaHigh Energy Physics::PhenomenologyNuclear Theorymuon captureneutriinotneutrino-nucleus interactionsnuclear matrix elementsastro-neutrinosphoto-nuclear reactionsaxial-vector couplingsolar neutrinosHigh Energy Physics::Experimentcharge-exchange reactionsNuclear Experimentsupernova neutrinos
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Spin-multipole nuclear matrix elements in the pn quasiparticle random-phase approximation: Implications for β and ββ half-lives

2017

Half-lives for 148 potentially measurable 2nd-, 3rd-, 4th-, 5th-, 6th-, and 7th-forbidden unique beta transitions are predicted. To achieve this, the ratio of the nuclear matrix elements (NMEs), calculated by the proton-neutron quasiparticle random-phase approximation (pnQRPA), MpnQRPA, and a two-quasiparticle (two-qp) model, Mqp, is studied and compared with earlier calculations for the allowed Gamow-Teller (GT) 1+ and first-forbidden spin-dipole (SD) 2− transitions. The present calculations are done using realistic single-particle model spaces and G-matrix based microscopic two-body interactions. In terms of the ratio k = MpnQRPA/Mqp the studied decays fall into two groups: for GROUP 1, w…

forbidden beta decaybeta decaynuclear matrix elementsproton-neutron quasiparticle random-phase approximation
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Comparative Analysis of Nuclear Matrix Elements of 0νβ+β+ Decay and Muon Capture in 106Cd

2021

Comparative analyses of the nuclear matrix elements (NMEs) related to the 0νβ+β+ decay of 106Cd to the ground state of 106Pd and the ordinary muon capture (OMC) in 106Cd are performed. This is the first time the OMC NMEs are studied for a nucleus decaying via positron-emitting/electron-capture modes of double beta decay. All the present calculations are based on the proton-neutron quasiparticle random-phase approximation with large no-core single-particle bases and realistic two-nucleon interactions. The effect of the particle-particle interaction parameter gpp of pnQRPA on the NMEs is discussed. In the case of the OMC, the effect of different bound-muon wave functions is studied. peerRevie…

particle-particle interaction parameterMaterials Science (miscellaneous)quasiparticle random-phase approximationBiophysicsbound-muon wave functionGeneral Physics and Astronomynuclear matrix elementshiukkasfysiikkanuclear double beta decayHigh Energy Physics::ExperimentPhysical and Theoretical Chemistrynuclear muon captureydinfysiikkaMathematical Physics
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