Search results for "OA"

showing 10 items of 22575 documents

Fine-Scale Population Differences in Atlantic Cod Reproductive Success: A Potential Mechanism for Ecological Speciation in a Marine Fish

2018

Abstract Successful resource‐management and conservation outcomes ideally depend on matching the spatial scales of population demography, local adaptation, and threat mitigation. For marine fish with high dispersal capabilities, this remains a fundamental challenge. Based on daily parentage assignments of more than 4,000 offspring, we document fine‐scaled temporal differences in individual reproductive success for two spatially adjacent (<10 km) populations of a broadcast‐spawning marine fish. Distinguished by differences in genetics and life history, Atlantic cod (Gadus morhua) from inner‐ and outer‐fjord populations were allowed to compete for mating and reproductive opportunities. After …

0106 biological sciencesPopulationfjord010603 evolutionary biology01 natural sciencesEcological speciationGadus14. Life underwatereducationEcology Evolution Behavior and SystematicsNature and Landscape ConservationLocal adaptationOriginal Researcheducation.field_of_studyEcologybiologyEcotypeReproductive successEcology010604 marine biology & hydrobiologybiology.organism_classificationmatingGadus morhuaAtlantic codparentageBiological dispersalAtlantic codbroadcast spawning
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Cold water reduces the severity of parasite-inflicted damage : support for wintertime recuperation in aquatic hosts

2019

The reduction in host fitness caused by parasite infections (virulence) depends on infection intensity and the degree of damage caused per parasite. Environmental conditions can shape both virulence components, but in contrast to infection intensity, environmental impacts on per-parasite damage are poorly understood. Here, we studied the effect of ambient temperature on per-parasite damage, which is jointly determined by the ability of parasites to induce harm (per-parasite pathogenicity) and the ability of hosts to limit damage (tolerance). We experimentally exposed two salmonid species, Atlantic salmon (Salmo salar) and sea trout (Salmo trutta), to replicated genotypes of the eye fluke Di…

0106 biological sciencesPost exposureTroutSalmo salarsalmonidZoologyVirulence010603 evolutionary biology01 natural sciencesParasite loadinfektiotHost-Parasite InteractionstrematodeFish DiseasesloisetSea troutParasite hostingAnimalsParasitesSalmoEcology Evolution Behavior and SystematicssietokykytolerancebiologyHost (biology)010604 marine biology & hydrobiologyimumadotvirulenssilohikalatWatertemperaturebiology.organism_classificationkalatauditvirulenceWarm waterlämpötilaTrematoda
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The skeletal proteome of the coral Acropora millepora: the evolution of calcification by co-option and domain shuffling.

2013

14 pages; International audience; In corals, biocalcification is a major function that may be drastically affected by ocean acidification (OA). Scleractinian corals grow by building up aragonitic exoskeletons that provide support and protection for soft tissues. Although this process has been extensively studied, the molecular basis of biocalcification is poorly understood. Notably lacking is a comprehensive catalog of the skeleton-occluded proteins-the skeletal organic matrix proteins (SOMPs) that are thought to regulate the mineral deposition. Using a combination of proteomics and transcriptomics, we report the first survey of such proteins in the staghorn coral Acropora millepora. The or…

0106 biological sciencesProteomeCoralMolecular Sequence Datacalcium carbonate skeletonProteomics010603 evolutionary biology01 natural sciencesMass SpectrometryCalcium CarbonateEvolution Molecular03 medical and health sciencesAcropora milleporaCalcification PhysiologicproteomicsPhylogeneticsAnthozoa[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]evolutionGeneticsAnimals14. Life underwaterAmino Acid Sequencescleractinian[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsMolecular BiologyEcology Evolution Behavior and SystematicsDiscoveriesPhylogeny030304 developmental biologyStaghorn coral0303 health sciencesbiologySequence Homology Amino AcidEcologyMolecular Sequence Annotationbiology.organism_classification[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsAnthozoabiomineralizationExtracellular MatrixProtein Structure TertiaryEvolutionary biology[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ProteomeSequence AlignmentFunction (biology)
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Northern refugia and recent expansion in the North Sea: The case of the wrasse Symphodus melops (Linnaeus, 1758)

2011

Pleistocene climate changes have imposed extreme conditions to intertidal rocky marine communities, forcing many species to significant range shifts in their geographical distributions. Phylogeographic analyses based on both mitochondrial and nuclear genetic markers provide a useful approach to unravel phylogeographic patterns and processes of species after this time period, to gain general knowledge of how climatic changes affect shifts in species distributions. We analyzed these patterns on the corkwing wrasse (Symphodus melops, Labridae), a rocky shore species inhabiting North Sea waters and temperate northeastern Atlantic Ocean from Norway to Morocco including the Azores, using a fragme…

0106 biological sciencesRange (biology)Intertidal zonePhylogenetic-Relationshipsphylogeography010603 evolutionary biology01 natural sciences03 medical and health sciencesRocky shoreRefugium (population biology)LabridaeMediterranean SeaNorth seaVDP::Mathematics and natural science: 400::Zoology and botany: 480::Marine biology: 49714. Life underwaterGlacial periodglacial refugiaEcology Evolution Behavior and SystematicsOriginal Research030304 developmental biologyNature and Landscape ConservationMitochondrial-Dna Variation0303 health sciencesbiologyEcologyEcologyGenetic-structurePopulationsMtdnaLast Glacial Maximumbiology.organism_classificationBlenniidaePhylogeography13. Climate actionAtlantic coastInterglacialAtlanticspatial variation of genetic diversityCorkwing wrasseLipophrys-Pholis Pisces
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Grass leaves as potential hominin dietary resources

2018

Discussions about early hominin diets have generally excluded grass leaves as a staple food resource, despite their ubiquity in most early hominin habitats. In particular, stable carbon isotope studies have shown a prevalent C4 component in the diets of most taxa, and grass leaves are the single most abundant C4 resource in African savannas. Grass leaves are typically portrayed as having little nutritional value (e.g., low in protein and high in fiber) for hominins lacking specialized digestive systems. It has also been argued that they present mechanical challenges (i.e., high toughness) for hominins with bunodont dentition. Here, we compare the nutritional and mechanical properties of gra…

0106 biological sciencesResource (biology)BiologyPoaceae010603 evolutionary biology01 natural sciencesSouth Africaotorhinolaryngologic diseasesAnimals0601 history and archaeologyEcology Evolution Behavior and Systematics2. Zero hunger060101 anthropologyEcologyfood and beveragesHominidae06 humanities and the arts15. Life on landBiological EvolutionGrasslandKenyaBiomechanical PhenomenaDietPlant LeavesNutrition AssessmentTaxonHabitatAnthropologyDietary fiber
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Ecological dependencies make remote reef fish communities most vulnerable to coral loss

2021

Ecosystems face both local hazards, such as over-exploitation, and global hazards, such as climate change. Since the impact of local hazards attenuates with distance from humans, local extinction risk should decrease with remoteness, making faraway areas safe havens for biodiversity. However, isolation and reduced anthropogenic disturbance may increase ecological specialization in remote communities, and hence their vulnerability to secondary effects of diversity loss propagating through networks of interacting species. We show this to be true for reef fish communities across the globe. An increase in fish-coral dependency with the distance of coral reefs from human settlements, paired with…

0106 biological sciencesRichnessconservation biologyekologiset verkostotGeneral Physics and Astronomy01 natural sciencesConservation of Natural ResourceAnthropogenic EffectmeriekologiaPatterns0303 health sciencesDiversityMultidisciplinaryConservation biologyCoral ReefsAnthropogenic EffectsQClimate-change ecologyFishesBiodiversityAnthozoaHabitat1181 Ecology evolutionary biologyCoral ReefHumanclimate-change ecologyConservation of Natural Resources[SDE.MCG]Environmental Sciences/Global ChangesScienceClimate ChangeBiotic interactions010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologyArticlekoralliriutat03 medical and health sciencesAnimals; Anthozoa; Anthropogenic Effects; Biodiversity; Climate Change; Conservation of Natural Resources; Coral Bleaching; Fishes; Humans; Spatial Analysis; Coral ReefsFood-webAnimalsHumansecological networks14. Life underwater030304 developmental biologySpatial AnalysisCoral BleachingAnimalkalakannatGeneral ChemistryDisturbanceSpatial Analysiilmastonmuutokset15. Life on landbiodiversiteetti13. Climate actionEcological networks[SDE.BE]Environmental Sciences/Biodiversity and EcologyFisheNature Communications
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Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula

2004

To construct macro- and microarray tools suitable for expression profiling in root endosymbioses of the model legume Medicago truncatula, we PCR-amplified a total of 6048 cDNA probes representing genes expressed in uninfected roots, mycorrhizal roots and young root nodules [Nucleic Acids Res. 30 (2002) 5579]. Including additional probes for either tissue-specific or constitutively expressed control genes, 5651 successfully amplified gene-specific probes were used to grid macro- and to spot microarrays designated Mt6k-RIT (M. truncatula 6k root interaction transcriptome). Subsequent to a technical validation of microarray printing, we performed two pilot expression profiling experiments usin…

0106 biological sciencesRoot nodule[SDV]Life Sciences [q-bio]Plant Roots01 natural sciencesApplied Microbiology and BiotechnologyTranscriptomeADNCGene Expression Regulation PlantGene Expression Regulation FungalMycorrhizaeMedicagoPCR-basedComputingMilieux_MISCELLANEOUSOligonucleotide Array Sequence AnalysisPlant ProteinsExpressed Sequence Tags2. Zero hunger0303 health sciencesnodulin genesroot nodule symbiosisarbuscular mycorrhizafood and beveragesEquipment DesignGeneral MedicineMedicago truncatulaArbuscular mycorrhiza[SDV] Life Sciences [q-bio]expression profilingDNA microarrayBiotechnologyBioengineeringComputational biologyBiologySensitivity and Specificity03 medical and health sciencesComplementary DNABotanySymbiosisLeghemoglobin030304 developmental biologyGene Expression ProfilingfungiReproducibility of Resultsbiology.organism_classificationEquipment Failure AnalysisGene expression profilingphosphate transportercDNA array010606 plant biology & botany
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Acclimatised rumen culture for raw microalgae conversion into biogas: Linking microbial community structure and operational parameters in anaerobic m…

2019

[EN] Ruminal fluid was inoculated in an Anaerobic Membrane Reactor (AnMBR) to produce biogas from raw Scenedesmus. This work explores the microbial ecology of the system during stable operation at different solids retention times (SRT). The 16S rRNA amplicon analysis revealed that the acclimatised community was mainly composed of Anaerolineaceae, Spirochaetaceae, Lentimicrobiaceae and Cloacimonetes fermentative and hydrolytic members. During the highest biodegradability achieved in the AnMBR (62%) the dominant microorganisms were Fervidobacterium and Methanosaeta. Different microbial community clusters were observed at different SRT conditions. Interestingly, syntrophic bacteria Gelria and …

0106 biological sciencesRumenEnvironmental EngineeringMicroorganismBioengineering010501 environmental sciencesWaste Disposal Fluid01 natural sciencesMethanosaetaBioreactorsBiogasMicrobial ecologyBioenergyRNA Ribosomal 16S010608 biotechnologyMicroalgaeBioreactorAnimalsAnaerobiosisWaste Management and DisposalTECNOLOGIA DEL MEDIO AMBIENTE0105 earth and related environmental sciencesbiologyAnaerobic membrane bioreactor (AnMBR)Renewable Energy Sustainability and the EnvironmentChemistryMicrobiotaGeneral MedicineBiogasMicroalgaeBiodegradationbiology.organism_classificationPulp and paper industryMicrobial population biologyBiofuels16S rRNA geneMethaneBioresource Technology
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Evaluation and comparison of trace metal accumulation in different tissues of potential bioindicator organisms: Macrobenthic filter feedersStyela pli…

2016

Trace metal concentrations were measured in different tissues of Sabella spallanzanii, Styela plicata, and Mytilus galloprovincialis collected in the Termini Imerese Harbor (Sicily, Italy) to evaluate the potential use of these species as bioindicators. Higher bioaccumulation factors (BAFs) were calculated in the tube of S. spallanzanii, except for As, which had a higher BAF in the branchial crown of the same species. Regarding the other species analyzed, higher BAFs were found in the digestive gland of M. galloprovincialis. An exception was Pb, which was significantly more concentrated in the branchial basket and tunic of S. plicata. The BAFs calculated in the present study show that all t…

0106 biological sciencesSabella spallanzaniibiologyEcology010604 marine biology & hydrobiologyHealth Toxicology and MutagenesisZoology010501 environmental sciencesbiology.organism_classification01 natural sciencesMytilusFilter (aquarium)Styela plicataFilter feedingBioaccumulationEnvironmental ChemistryTrace metalBioindicator0105 earth and related environmental sciencesEnvironmental Toxicology and Chemistry
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Restoration of Abundance and Dynamics of Coastal Fish and Lobster Within Northern Marine Protected Areas Across Two Decades

2021

This article reviews a suite of studies conducted in a network of coastal Marine Protected Areas (MPAs) in Skagerrak, Southeast Norway. In 2006, Norway’s first lobster reserves were implemented, with the aim of protecting European lobster (Homarus gammarus) through a ban on fixed gear. A before–after control-impact paired series (BACIPS) monitoring program was initiated to evaluate effects of protection on depleted lobster populations. Experimental trapping and capture-recapture techniques were combined to track demography of populations, also including movement of individuals within and beyond MPAs and adjacent control areas. Further, population genetics and parentage studies were applied,…

0106 biological sciencesScienceCoastal fishOcean EngineeringCrustaceanAquatic ScienceQH1-199.5Oceanography010603 evolutionary biology01 natural sciencesHomarus gammarusFisheries managementVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 47014. Life underwaterSalmoWater Science and TechnologyGlobal and Planetary ChangeFish migrationbiology010604 marine biology & hydrobiologyMarine reserveQEco-evolutionary dynamicsGeneral. Including nature conservation geographical distributionMarine reserveRebuildingbiology.organism_classificationMonitoring programFisherySpilloverGeographyMarine protected areaAcoustic telemetryFisheries managementDisplacement of effort
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