Search results for "Occupancy"

Early evidence of fire in south-western Europe: the Acheulean site of Gruta da Aroeira (Torres Novas, Portugal)

2020

The site of Gruta da Aroeira (Torres Novas, Portugal), with evidence of human occupancy dating to ca. 400 ka (Marine Isotope Stage 11), is one of the very few Middle Pleistocene localities to have provided a fossil hominin cranium associated with Acheulean bifaces in a cave context. The multi-analytic study reported here of the by-products of burning recorded in layer X suggests the presence of anthropogenic fires at the site, among the oldest such evidence in south-western Europe. The burnt material consists of bone, charcoal and, possibly, quartzite cobbles. These finds were made in a small area of the cave and in two separate occupation horizons. Our results add to our still-limited know…

Fuzzy quantification of common and rare species in ecological communities (FuzzyQ)

2021

International audience; Most species in ecological communities are rare, whereas only a few are common. This distributional paradox has intrigued ecologists for decades but the interpretation of species abundance distributions remains elusive.We present Fuzzy Quantification of Common and Rare Species in Ecological Communities (FuzzyQ) as an R package. FuzzyQ shifts the focus from the prevailing species-categorization approach to develop a quantitative framework that seeks to place each species along a rarity-commonness gradient. Given a community surveyed over a number of sites, quadrats, or any other convenient sampling unit, FuzzyQ uses a fuzzy clustering algorithm that estimates a probab…

The value of by-catch data: how species-specific surveys can serve non-target species

2019

Camera trapping has a wide range of research application, but, while research designs are often focused on the study of a single focal species, cameras can also record other non-target species. Occupancy modeling using by-catch data can be a valuable resource to gain information on these species maximizing the scientific effort and efficiency of wildlife surveys. In this study, we used by-catch data from a European wildcat (Felis silvestris silvestris) survey in Southern Italy to assess the habitat covariates determinant for the occupancy of the crested porcupine (Hystrix cristata). We recorded 33 detections at 17 out of 51 cameras (naive occupancy = 0.33). The best models fitted the data w…

Nest sites of a strong excavator, the Great Spotted Woodpecker Dendrocopos major, in a primeval forest

2017

In managed forests, birds that create their own breeding holes in trees have limited access to substrates in which they can excavate. Therefore, nest site use in these forests possibly reflects availability of substrates more than species preferences. We analysed data on nest sites of Great Spotted Woodpeckers Dendrocopos major collected during 1987–2013 in the strictly protected part of Białowieża National Park in East Poland. The woodpeckers excavated breeding holes in 11 tree species, but species used in individual habitats varied greatly: Alder Alnus glutinosa was almost the only species used in the riverine forest; Common Aspen Populus tremula, Common Hornbeam Carpinus betulus and Pedu…

Fine‐grain beta diversity of Palaearctic grassland vegetation

2021

QUESTIONS: Which environmental factors influence fine-grain beta diversity of vegetation and do they vary among taxonomic groups? LOCATION: Palaearctic biogeographic realm. METHODS: We extracted 4,654 nested-plot series with at least four different grain sizes between 0.0001 m² and 1,024 m² from the GrassPlot database, covering a wide range of different grassland and other open habitat types. We derived extensive environmental and structural information for these series. For each series and four taxonomic groups (vascular plants, bryophytes, lichens, all), we calculated the slope parameter (z-value) of the power law species–area relationship (SAR), as a beta diversity measure. We tested whe…

2018

Odonate (damselfly and dragonfly) species richness and species occupancy frequency distributions (SOFDs) were analyzed in relation to geographical location in standing waters (lakes and ponds) in Fennoscandia, from southern Sweden to central Finland. In total, 46 dragonfly and damselfly species were recorded from 292 waterbodies. Species richness decreased to the north and increased with waterbody area in central Finland, but not in southern Finland or in Sweden. Species occupancy ranged from 1 up to 209 lakes and ponds. Over 50% of the species occurred in <10% of the waterbodies, although this proportion decreased to the north. In the southern lakes and ponds, none of the species occurred …

Applying economic and ecological criteria to design cost-effective monitoring for elusive species

2020

Abstract Monitoring programs of long-lived and elusive species often incur high costs in terms of field effort and economical budget, but both components are often considered separately. Also, there is scant information on the use of reliable detectability estimates under imperfect detection conditions based on environmental factors, which is key to accurately estimate financial costs and define optimum monitoring strategies. In this study, we use an intensive survey program (2017–2018) of the Egyptian vulture Neophron percnopterus population in Bizkaia (northern Spain) to model detectability at nests taking into account imperfect detection. Our main goal is to estimate both the number and …

Within-season movements of Alpine songbird distributions are driven by fine-scale environmental characteristics

2020

AbstractInformation about distribution and habitat use of organisms is crucial for conservation. Bird distribution within the breeding season has been usually considered static, but this assumption has been questioned. Within-season movements may allow birds to track changes in habitat quality or to adjust site choice between subsequent breeding attempts. Such movements are especially likely in temperate mountains, given the substantial environmental heterogeneity and changes occurring during bird breeding season. We investigated the within-season movements of breeding songbirds in the European Alps in spring-summer 2018, using repeated point counts and dynamic occupancy models. For all the…

Anthropogenic threats drive spatio-temporal responses of wildcat on Mt. Etna

2021

Human expansion can cause disturbance and intrusion of invasive species, which are detrimental to small carnivores. We investigated how European wildcats responded to disturbance from mushroom collectors, cattle and feral pigs in Sicily, Italy. We used detections from 76 cameras over 2 surveys (2015–2016 and 2018; camera days = 1985) to run occupancy and co-occurrence models and estimate overlap in activity patterns between species pairs. During 2015–2016, wildcats were detected at the same location with cattle, mushroom hunters and feral pigs at 14.4%, 26.3% and 17.1% of cameras. During 2018, wildcats were detected at the same location with cattle, mushroom hunters and feral pigs at 7.8%, …

Ecological niche features override biological traits and taxonomic relatedness as predictors of occupancy and abundance in lake littoral macroinverte…

2018

The degree to which species ecological and biological traits determine their distribution and abundance has intrigued ecologists for a long time, and it has seen a revival in recent years. This topic is important because it provides information about the determinants of species rarity and their conservation implications. We examined the effects of niche breadth, niche position, biological traits and taxonomic relatedness on the interspecific occupancy–abundance relationship, as well as on occupancy and abundance, in lake littoral macroinvertebrates. We sampled 48 lakes in a boreal lake district, found altogether 155 species, and calculated regional occupancy (as the proportion of sites occu…