Search results for "Occurrence"
showing 10 items of 92 documents
Using latent variable models to identify large networks of species‐to‐species associations at different spatial scales
2015
Summary We present a hierarchical latent variable model that partitions variation in species occurrences and co-occurrences simultaneously at multiple spatial scales. We illustrate how the parameterized model can be used to predict the occurrences of a species by using as predictors not only the environmental covariates, but also the occurrences of all other species, at all spatial scales. We leverage recent progress in Bayesian latent variable models to implement a computationally effective algorithm that enables one to consider large communities and extensive sampling schemes. We exemplify the framework with a community of 98 fungal species sampled in c. 22 500 dead wood units in 230 plot…
Scent of Jasmine Attracts Alien Invaders and Records on Citizen Science Platforms: Multiple Introductions of the Invasive Lacebug Corythauma ayyari (…
2020
Simple Summary The distribution of the lacebug Corythauma ayyari, a pest species associated to jasmine plants, has been updated using collections and citizen-science data. The path of introduction of this species in Italy has been inferred with molecular analysis. The results revealed an extent of occurrence in Italy wider than was previously known and the evidence of multiple introduction events. The work shows that citizen science can represent a further tool within the early warning information system for alien species introduction. Abstract The jasmine lacebug Corythauma ayyari is a pest of cultivated and ornamental plants mainly associated to Jasminum spp. This invasive insect is nativ…
Evaluating the presence of microplastics in striped dolphins (Stenella coeruleoalba) stranded in the Western Mediterranean Sea.
2020
Litter is a well-known problem for marine species; however, we still know little about the extent to which they're affected by microplastics. In this study, we analyse the presence of this type of debris in Western Mediterranean striped dolphins' intestinal contents over three decades. Results indicated that frequency was high, as 90.5% of dolphins contained microplastics. Of these microplastics, 73.6% were fibres, 23.87% were fragments and 2.53% were primary pellets. In spite of the high frequency of occurrence, microplastic amount per dolphin was relatively low and highly variable (mean ± SD = 14.9 ± 22.3; 95% CI: 9.58–23.4). Through FT-IR spectrometry, we found that polyacrylamide, typic…
Anthropogenic threats drive spatio-temporal responses of wildcat on Mt. Etna
2021
Human expansion can cause disturbance and intrusion of invasive species, which are detrimental to small carnivores. We investigated how European wildcats responded to disturbance from mushroom collectors, cattle and feral pigs in Sicily, Italy. We used detections from 76 cameras over 2 surveys (2015–2016 and 2018; camera days = 1985) to run occupancy and co-occurrence models and estimate overlap in activity patterns between species pairs. During 2015–2016, wildcats were detected at the same location with cattle, mushroom hunters and feral pigs at 14.4%, 26.3% and 17.1% of cameras. During 2018, wildcats were detected at the same location with cattle, mushroom hunters and feral pigs at 7.8%, …
Antarctic and Sub-Antarctic Asteroidea database
2018
The present dataset is a compilation of georeferenced occurrences of asteroids (Echinodermata: Asteroidea) in the Southern Ocean. Occurrence data south of 45°S latitude were mined from various sources together with information regarding the taxonomy, the sampling source and sampling sites when available. Records from 1872 to 2016 were thoroughly checked to ensure the quality of a dataset that reaches a total of 13,840 occurrences from 4,580 unique sampling events. Information regarding the reproductive strategy (brooders vs. broadcasters) of 63 species is also made available. This dataset represents the most exhaustive occurrence database on Antarctic and Sub-Antarctic asteroids.
A global occurrence database of the Atlantic blue crab Callinectes sapidus
2021
The Atlantic blue crab Callinectes sapidus is a portunid native to the western Atlantic, from New England to Uruguay. The species was introduced in Europe in 1901 where it has become invasive; additionally, a significant northward expansion has been emphasized in its native range. Here we present a harmonized global compilation of C. sapidus occurrences from native and non-native distribution ranges derived from online databases (GBIF, BISON, OBIS, and iNaturalist) as well as from unpublished and published sources. The dataset consists of 40,388 geo-referenced occurrences, 39,824 from native and 564 from non-native ranges, recorded in 53 countries. The implementation of quality controls imp…
Antarctic, Sub-Antarctic and cold temperate echinoid database
2012
6 pages; International audience; This database includes spatial data of Antarctic, Sub-Antarctic and cold temperate echinoid distribution (Echinodermata: Echinoidea) collected during many oceanographic campaigns led in the Southern Hemisphere from 1872 to 2010. The dataset lists occurrence data of echinoid distribution south of 35°S latitude, together with information on taxonomy (from species to genus level), sampling sources (cruise ID, sampling dates, ship names) and sampling sites (geographic coordinates and depth). Echinoid occurrence data were compiled from the Antarctic Echinoid Database (David et al. 2005a), which integrates records from oceanographic cruises led in the Southern Oce…
Are there so many congeneric species of chironomid larvae in a small stream?
2018
The co-occurrence of larvae of congeneric chironomid species is common in natural stream assemblages, and raises the problem of finding mechanisms to explain the co-existence of species with similar ecological requirements. In this contribution, we explored the co-occurrence of chironomid larvae belonging to congeneric species within four genera of chironomids: Cricotopus, Eukiefferiella, Orthocladius and Rheocricotopus (with 2, 7, 2 and 4 species, respectively) in the headwaters of a small Mediterranean calcareous stream. Due to the intrinsic, natural spatial and temporal variability in these habitats, we studied three different sites at two different seasons within the annual hydrological…
Modulation of Saliva Microbiota through Prebiotic Intervention in HIV-Infected Individuals
2019
Human immunodeficiency virus (HIV) infection is characterized by an early depletion of the mucosal associated T helper (CD4+) cells that impair the host immunity and impact the oral and gut microbiomes. Although, the HIV-associated gut microbiota was studied in depth, few works addressed the dysbiosis of oral microbiota in HIV infection and, to our knowledge, no studies on intervention with prebiotics were performed. We studied the effect of a six-week-long prebiotic administration on the salivary microbiota in HIV patients and healthy subjects. Also, the co-occurrence of saliva microorganisms in the fecal bacteria community was explored. We assessed salivary and feces microbiota compositio…
Fire and phylogenetic structure of soil microbial communities in Mediterranean ecosystems
2017
Tesis llevada a cabo para conseguir el grado de Doctor por la Universidad de Valencia.--2018-02-21.--Sobresaliente Cum laudem