Search results for "Oise"

showing 10 items of 1967 documents

Establishing and validating a new source analysis method using phase.

2017

Electroencephalogram (EEG) measures the brain oscillatory activity non-invasively. The localization of deep brain generators of the electric fields is essential for understanding neuronal function in healthy humans and for damasking specific regions that cause abnormal activity in patients with neurological disorders. The aim of this study was to test whether the phase estimation from scalp data can be reliably used to identify the number of dipoles in source analyses. The steps performed included: i) modeling different phasic oscillatory signals using auto-regressive processes at a particular frequency, ii) simulation of two different noises, namely white and colored noise, having differen…

0301 basic medicinePhase (waves)ElectroencephalographySignal-To-Noise RatioTemporal lobe03 medical and health sciencesEpilepsy0302 clinical medicineSignal-to-noise ratiomedicineHumansAnalysis methodBrain Mappingmedicine.diagnostic_testbusiness.industryBrainPattern recognitionElectroencephalographymedicine.disease030104 developmental biologymedicine.anatomical_structureEpilepsy Temporal LobeColors of noiseScalpArtificial intelligencePsychologybusinessNeuroscience030217 neurology & neurosurgeryAnnual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
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State transition identification in multivariate time series (STIMTS) applied to rotational jump trajectories from single molecules

2018

Time resolved data from single molecule experiments often suffer from contamination with noise due to a low signal level. Identifying a proper model to describe the data thus requires an approach with sufficient model parameters without misinterpreting the noise as relevant data. Here, we report on a generalized data evaluation process to extract states with piecewise constant signal level from simultaneously recorded multivariate data, typical for multichannel single molecule experiments. The method employs the minimum description length principle to avoid overfitting the data by using an objective function, which is based on a tradeoff between fitting accuracy and model complexity. We val…

0301 basic medicinePhysicsNoise (signal processing)Monte Carlo methodGeneral Physics and AstronomyOverfittingSynthetic data03 medical and health sciencesTime resolved data030104 developmental biologyPiecewiseJumpStatistical physicsPhysical and Theoretical ChemistryMinimum description lengthThe Journal of Chemical Physics
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Noise-Induced Vascular Dysfunction, Oxidative Stress, and Inflammation Are Improved by Pharmacological Modulation of the NRF2/HO-1 Axis

2021

Vascular oxidative stress, inflammation, and subsequent endothelial dysfunction are consequences of traditional cardiovascular risk factors, all of which contribute to cardiovascular disease. Environmental stressors, such as traffic noise and air pollution, may also facilitate the development and progression of cardiovascular and metabolic diseases. In our previous studies, we investigated the influence of aircraft noise exposure on molecular mechanisms, identifying oxidative stress and inflammation as central players in mediating vascular function. The present study investigates the role of heme oxygenase-1 (HO-1) as an antioxidant response preventing vascular consequences following exposu…

0301 basic medicinePhysiologyClinical BiochemistryInflammationDiseaseRM1-950030204 cardiovascular system & hematologyPharmacologymedicine.disease_causeenvironmental risk factorsBiochemistryArticleendothelial dysfunctionNRF203 medical and health scienceschemistry.chemical_compound0302 clinical medicinemedicineoxidative stressInducerEndothelial dysfunctionMolecular BiologyDimethyl fumaratebusiness.industryaircraft noise exposureheme oxygenase-1Cell Biologymedicine.diseaseNoise030104 developmental biologychemistryinflammationTherapeutics. Pharmacologymedicine.symptombusinessOxidative stressHeminAntioxidants
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Oxidative Stress: A Unifying Mechanism for Cell Damage Induced by Noise, (Water-Pipe) Smoking, and Emotional Stress-Therapeutic Strategies Targeting …

2018

Modern technologies have eased our lives but these conveniences can impact our lifestyles in destructive ways. Noise pollution, mental stresses, and smoking (as a stress-relieving solution) are some environmental hazards that affect our well-being and healthcare budgets. Scrutinizing their pathophysiology could lead to solutions to reduce their harmful effects. Recent Advances: Oxidative stress plays an important role in initiating local and systemic inflammation after noise pollution, mental stress, and smoking. Lipid peroxidation and release of lysolipid by-products, disturbance in activation and function of nuclear factor erythroid 2-related factor 2 (Nrf2), induction of stress hormones …

0301 basic medicinePhysiologyNF-E2-Related Factor 2Clinical BiochemistrySystemic inflammationmedicine.disease_causeBiochemistryAntioxidantsLipid peroxidation03 medical and health scienceschemistry.chemical_compound0302 clinical medicineWater Pipe SmokingMedicineHumansMolecular BiologyCell damageGeneral Environmental ScienceInflammationbusiness.industryNoise pollutionMechanism (biology)SmokingCell Biologymedicine.diseaseOxidative Stress030104 developmental biologychemistryGeneral Earth and Planetary SciencesLipid Peroxidationmedicine.symptombusinessNoiseReactive Oxygen SpeciesNeuroscienceOxidation-Reduction030217 neurology & neurosurgeryIntracellularOxidative stressStress PsychologicalSignal TransductionAntioxidantsredox signaling
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Variance component analysis to assess protein quantification in biomarker discovery. Application to MALDI-TOF mass spectrometry.

2017

International audience; Controlling the technological variability on an analytical chain is critical for biomarker discovery. The sources of technological variability should be modeled, which calls for specific experimental design, signal processing, and statistical analysis. Furthermore, with unbalanced data, the various components of variability cannot be estimated with the sequential or adjusted sums of squares of usual software programs. We propose a novel approach to variance component analysis with application to the matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) technology and use this approach for protein quantification by a classical signal processing algori…

0301 basic medicineStatistics and ProbabilityMALDI-TOFexperimental designBiometryprotein quantificationQuantitative proteomicsVariance component analysis[ CHIM ] Chemical Sciences01 natural sciencesSignaltechnological variability010104 statistics & probability03 medical and health sciencesstatistical analysis[INFO.INFO-TS]Computer Science [cs]/Signal and Image Processing[CHIM.ANAL]Chemical Sciences/Analytical chemistryComponent (UML)[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]biomarker discoverysum of squares type0101 mathematicsBiomarker discoverysignal processingMathematicsSignal processingAnalysis of Variance[ PHYS ] Physics [physics]Noise (signal processing)ProteinsGeneral MedicineVariance (accounting)[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]030104 developmental biologySpectrometry Mass Matrix-Assisted Laser Desorption-IonizationLinear Modelsvariance components[ CHIM.ANAL ] Chemical Sciences/Analytical chemistryStatistics Probability and UncertaintyBiological systemAlgorithmsBiomarkersBiometrical journal. Biometrische Zeitschrift
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Bacterial antisense RNAs are mainly the product of transcriptional noise

2015

Most of the antisense transcripts in bacteria are the product of transcriptional noise derived from spurious promoters.

0301 basic medicineTranscription GeneticBacterial antisense RNAs030106 microbiologyinformation scienceBiologyGenomeTranscriptome03 medical and health sciencesSpecies SpecificityTranscription (biology)medicineLife Sciencenatural sciencesRNA AntisenseSystems and Synthetic BiologyResearch ArticlesGeneticsBiomoleculesMessenger RNASysteem en Synthetische BiologieMultidisciplinaryRNASciAdv r-articlesPromotersocial sciencesmedicine.diseaseequipment and supplieshealth care quality access and evaluationChloroplastRNA BacterialCardiovascular and Metabolic Diseasesbacterial antisense RNAsRNATranscriptomeTranscriptional noiseResearch ArticleScience Advances
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Trematode cercariae as prey for zooplankton: effect on fitness traits of predators.

2019

AbstractRemoval of parasite free-living stages by predators has previously been suggested an important factor controlling parasite transmission in aquatic habitats. Experimental studies of zooplankton predation on macroparasite larvae are, however, scarce. We tested whether trematode cercariae, which are often numerous in shallow waters, are suitable prey for syntopic zooplankters. Feeding rates and survival of freshwater cyclopoids (Megacyclops viridis, Macrocyclops distinctus), calanoids (Arctodiaptomus paulseni), cladocerans (Sida crystallina) and rotifers Asplanchna spp., fed with cercariae of Diplostomum pseudospathaceum, a common fish trematode, were studied. In additional long-term e…

0301 basic medicinecopepodsSnailsRotiferareproduktioPredation0302 clinical medicineeye flukerataseläimetloisetCercariaTrophic levelLarvafood webbiologyparasite transmissionplanktonvesiekosysteemit030108 mycology & parasitologyFood webDiplostomumInfectious DiseaseshankajalkaisetTrematodaArctodiaptomusFood Chain030231 tropical medicineCladoceransZoologyZooplanktonZooplanktonfreshwater ecosystemrotifersCopepodatoukat03 medical and health sciencesAnimalsAnalysis of VarianceimumadotAquatic animalbiology.organism_classificationmortalityPredatory Behaviorvesikirputta1181MacroparasiteAnimal Science and ZoologyParasitologyravintoverkotParasitology
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De novo transcriptome assembly of a facultative parasitic nematode Pelodera (syn. Rhabditis) strongyloides

2018

Pelodera strongyloides is a generally free-living gonochoristic facultative nematode. The whole genomic sequence of P. strongyloides remains unknown but 4 small subunit ribosomal RNA (ssrRNA) gene sequences are available. This project launched a de novo transcriptome assembly with 100 bp paired-end RNA-seq reads from normal, starved and wet-plate cultured animals. Trinity assembly tool generated 104,634 transcript contigs with N50 contig being 2195 bp and average contig length at 1103 bp. Transcriptome BLASTX matching results of five nematodes (C. elegans, Strongyloides stercoralis, Necator americanus, Trichuris trichiura, and Pristionchus pacificus) were consistent with their evolutionary …

0301 basic medicinedauerDe novo transcriptome assemblyved/biology.organism_classification_rank.speciestranscriptome assemblyTranscriptomeEvolution Molecular03 medical and health scienceschemistry.chemical_compoundContig Mapping0302 clinical medicineRNA polymerasefacultative parasiteloisetGeneticsPelodera strongyloidesAnimalsGenePhylogenyGeneticsbiologyved/biologySequence Analysis RNAGene Expression ProfilingsukkulamadotstarvationGeneral MedicineHelminth ProteinsRibosomal RNAbiology.organism_classification030104 developmental biologyPristionchus pacificuschemistryGene Expression Regulationtranskriptio (biologia)030220 oncology & carcinogenesisStrongyloidesbiology.proteinRNARhabditoideaDicer
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Extracellular electrical recording of pH-triggered bursts in C6 glioma cell populations

2016

Extracellular electrode recording demonstrates acid-triggered electrical activity in glioma cell populations.

0301 basic medicinegliaAcid-sensing ion channelsbioelectronicsBiologySodium Channels03 medical and health sciencesBurstingchemistry.chemical_compound0302 clinical medicineCell Line TumorGliomaASICsPsalmotoxinmedicineExtracellularAnimalsHumansneoplasmsResearch ArticlesAcid-sensing ion channelIon channelLow frequency current noiseNeuronsBioelectronicsMultidisciplinarySodium channelSciAdv r-articlesGliomaHydrogen-Ion Concentrationmedicine.diseaseC6 Gliomanervous system diseasesElectrophysiological PhenomenaRatsPcTX-1030104 developmental biologychemistryCell cultureBiophysicsASICs; Acid-sensing ion channels; C6 Glioma; Electrical recording; Low frequency current noise; PcTX-1; bioelectronics; gliaNerve Net030217 neurology & neurosurgeryResearch ArticleElectrical recordingScience Advances
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Importance of Sequence and Timing in Parasite Coinfections

2019

Coinfections by multiple parasites predominate in the wild. Interactionsbetween parasites can be antagonistic, neutral, or facilitative, and they canhave significant implications for epidemiology, disease dynamics, and evolu-tion of virulence. Coinfections commonly result from sequential exposure ofhosts to different parasites. We argue that the sequential nature of coinfectionsis important for the consequences of infection in both natural and man-madeenvironments. Coinfections accumulate during host lifespan, determining thestructure of the parasite infracommunity. Interactions within the parasite com-munity and their joint effect on the host individual potentially shape evolution ofparasi…

0301 basic medicineinfection dynamicsTime Factors030231 tropical medicineDisease epidemiology2405 ParasitologyVirulenceBiologyinfektiotHost-Parasite Interactions03 medical and health sciencessequential infection10127 Institute of Evolutionary Biology and Environmental Studies0302 clinical medicineloisetParasitic DiseasesParasite hostingAnimalsHumansParasitesepidemiologiaSequence (medicine)Transmission (medicine)Host (biology)Coinfectiondisease epidemiologymultiple infection2725 Infectious Diseasesvirulence evolutionPlantsMultiple infections030104 developmental biologyInfectious DiseasesParasitologyconcomitant infectionEvolutionary biologyta1181570 Life sciences; biology590 Animals (Zoology)Parasitology
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