Search results for "PGP"
showing 7 items of 27 documents
Characterization of the role of flagellin in the innate immunity triggered by the endophytic pgpr burkholderia phytofirmans in arabidopsis and grapev…
2014
International audience
Efficacy of microbial consortia and natural compounds as seed treatment for tomato pathogen management
2022
In this study the efficacy of experimental treatments based on microbial consortia (MC) (beneficial rhizobacteria and fungi, actinomycetes, arbuscular mycorrhizal fungi) and natural compounds (NCs) (chitosan and glucosinolates) as seed treatments for tomato bacterial and fungal pathogens management (Xanthomonas euvesicatoria pv. perforans, Xep; Pseudomonas syringae pv. tomato, Psto; Fusarium oxysporum f. sp. radicis-lycopersici, FORL) was evaluated. Independent trials were performed by using organic tomato seeds ‘San Marzano nano’. Treatments were performed by soaking seeds either in aqueous MC suspensions or NC dilutions. The direct effect on the seed inoculum was performed on seeds inocul…
Effects of different emulsifiers and refining time on rheological and textural characteristics of compound chocolate
2018
The purpose of this study was to investigate the possibility of producing reduced fat dark compound chocolate in the ball mill refiner and using some selected emulsifiers. The effects of selected emulsifiers including lecithin, Polyglycerol polyricinoleate (PGPR) and citrem in two levels and two refining times on the characteristics such as moisture, particle size, hardness and rheological properties of the samples was examined. Data analysis revealed that the Casson model was appropriate to describe the rheological behavior of the samples containing lecithin and citrem; however, Power law model was appropriate for the samples containing PGPR. The results showed that citrem is the most effe…
Studi preliminari sulla propagazione gamica e vegetativa di Hypericum perforatum in ambiente mediterraneo
2014
La conoscenza dei fattori che influenzano la propagazione di una specie rappresenta un passo cruciale nella messa a punto di strategie per la sua moltiplicazione di massa e introduzione in coltura, sia in campo che in ambiente controllato. Sono stati approfonditi alcuni aspetti della propagazione gamica di Hypericum perforatum (di cui è nota la bassa germinabilità del seme), verificando in particolare gli effetti di variabili diverse (soddisfacimento delle esigenze in freddo, temperatura, substrato, presenza di PGPR, batteri promotori della crescita). Sono stati inoltre approfonditi gli studi sulle potenzialità di moltiplicazione vegetativa della specie, da proporre come possibile alternati…
CUDA-BLASTP: Accelerating BLASTP on CUDA-enabled graphics hardware
2011
Scanning protein sequence database is an often repeated task in computational biology and bioinformatics. However, scanning large protein databases, such as GenBank, with popular tools such as BLASTP requires long runtimes on sequential architectures. Due to the continuing rapid growth of sequence databases, there is a high demand to accelerate this task. In this paper, we demonstrate how GPUs, powered by the Compute Unified Device Architecture (CUDA), can be used as an efficient computational platform to accelerate the BLASTP algorithm. In order to exploit the GPU's capabilities for accelerating BLASTP, we have used a compressed deterministic finite state automaton for hit detection as wel…
Guanosine 5'-diphosphate 3'-diphosphate (ppGpp) as a negative modulator of polynucleotide phosphorylase activity in a 'rare' actinomycete.
2010
Abstract With the beginning of the idiophase the highly phosphorylated guanylic nucleotides guanosine 5'-diphosphate 3'-diphosphate (ppGpp) and guanosine 5'-triphosphate 3'-diphosphate (pppGpp), collectively referred to as (p)ppGpp, activate stress survival adaptation programmes and trigger secondary metabolism in actinomycetes. The major target of (p)ppGpp is the RNA polymerase, where it binds altering the enzyme activity. In this study analysis of the polynucleotide phosphorylase (PNPase)-encoding gene pnp mRNA, in Nonomuraea sp. ATCC 39727 wild-type, constitutively stringent and relaxed strains, led us to hypothesize that in actinomycetes (p)ppGpp may modulate gene expression at the leve…
GPGPU-säteenseuranta
2012
Säteenseuranta on rinnakkaistuva ja laskentaintensiivinen tapa tuottaa kolmiulotteista tietokonegrafiikkaa. Yleiskäyttöiset grafiikkaprosessorit (GPGPU) ovat tehokkaita rinnakkaislaskentaprosessoreita, joiden avulla voidaan kiihdyttää säteenseurantaa. Tässä tutkielmassa käsitellään säteenseurannan toteuttamista yleiskäyttöisillä grafiikkaprosessoreilla ja esitetään rakenne yksinkertaiselle GPGPU-säteenseurantaohjelmalle. Käsittelyn aiheena ovat myös säteenseurantaa kiihdyttävien menetelmien, kuten kiihdytysrakenteiden, toteuttaminen GPGPU-laskennalla. Ray tracing is a parallel and computationally intensive way of producing three dimensional computer graphics. General-purpose graphics proces…