Search results for "PHOSPHATASE"

showing 10 items of 499 documents

Tropicibacter multivorans sp. nov., an aerobic alphaproteobacterium isolated from surface seawater.

2011

Strain MD5T, an aerobic marine alphaproteobacterium, was isolated from Mediterranean seawater at Malvarrosa beach, Valencia, Spain. The strain was characterized in a polyphasic study and was placed phylogenetically within the Roseobacter clade in the family Rhodobacteraceae . Phylogenetic analysis based on 16S rRNA gene sequences showed that strain MD5T is related to Tropicibacter naphthalenivorans C02T, Phaeobacter inhibens T5T, P. gallaeciensis BS107T and P. daeponensis TF-218T, with 96.9, 96.2, 96.1 and 96.1 % sequence similarity, respectively. Phylogenetic analyses also showed that strain MD5T forms a stable clade only with T. naphthalenivorans C02T. Strain MD5T requires Na+ plus a diva…

DNA BacterialUbiquinoneMolecular Sequence DataMicrobiologyMicrobiologyAesculinchemistry.chemical_compoundPhylogeneticsRNA Ribosomal 16SMediterranean SeaSeawaterRhodobacteraceaeRhodobacteraceaeEcology Evolution Behavior and SystematicsPhylogenyBase CompositionbiologyStrain (chemistry)Fatty AcidsAcid phosphataseGeneral MedicineSequence Analysis DNARibosomal RNARoseobacter16S ribosomal RNAbiology.organism_classificationBacterial Typing TechniquesBiochemistrychemistrySpainbiology.proteinInternational journal of systematic and evolutionary microbiology
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Cold stress defense in the freshwater sponge Lubomirskia baicalensis

2007

The endemic freshwater sponge Lubomirskia baicalensis lives in Lake Baikal in winter (samples from March have been studied) under complete ice cover at near 0 degrees C, and in summer in open water at 17 degrees C (September). In March, specimens show high metabolic activity as reflected by the production of gametes. L. baicalensis lives in symbiosis with green dinoflagellates, which are related to Gymnodinium sanguineum. Here we show that these dinoflagellates produce the toxin okadaic acid (OA), which is present as a free molecule as well as in a protein-bound state. In metazoans OA inhibits both protein phosphatase-2A and protein phosphatase-1 (PP1). Only cDNA corresponding to PP1 could …

DNA ComplementaryMolecular Sequence DataPhosphataseFresh WaterBiologymedicine.disease_causeModels BiologicalBiochemistrychemistry.chemical_compoundMicroscopy Electron TransmissionWestern blotCatalytic DomainProtein Phosphatase 1Complementary DNAOkadaic AcidPhosphoprotein PhosphatasesmedicineAnimalsHumansHSP70 Heat-Shock ProteinsAmino Acid SequenceProtein Phosphatase 2SymbiosisMolecular BiologyIncubationMolecular massmedicine.diagnostic_testToxinCell BiologyOkadaic acidbiology.organism_classificationPoriferaCold TemperatureSpongechemistryBiochemistryDinoflagellidaFEBS Journal
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Lack of phosphoserine phosphatase activity alters pollen and tapetum development in Arabidopsis thaliana.

2015

Formation of mature pollen grain, an essential process for the reproduction of higher plants, is affected in lines that are deficient in the enzymes of the phosphorylated pathway of serine biosynthesis (PPSB). Mutants of phosphoserine phosphatase (PSP), the enzyme that catalyses the last step of PPSB, are embryo-lethal. When they are complemented with a construct carrying PSP1 cDNA under the control of the 35S promoter (psp1.1 35S:PSP1), which is poorly expressed in anther tissues, plants display a wild-type phenotype, but are male-sterile. The pollen from the psp1.1 35S:PSP1 lines are shrunken and unviable. Here we report the morphological alterations that appear in the psp1.1 35S:PSP1 lin…

DNA ComplementaryStamenArabidopsisPlant ScienceFlowersBiologymedicine.disease_causePollen coatMicrosporePollenGeneticsmedicineSerineArabidopsis thalianaPlant OilsPollinationPromoter Regions GeneticPlant ProteinsTapetumfood and beveragesPhosphoserine phosphataseGeneral Medicinebiology.organism_classificationPlants Genetically ModifiedPhosphoric Monoester HydrolasesBiochemistryPollenAgronomy and Crop SciencePollen wallPlant science : an international journal of experimental plant biology
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Analysis of Lipid Experiments (ALEX): A Software Framework for Analysis of High-Resolution Shotgun Lipidomics Data

2013

Global lipidomics analysis across large sample sizes produces high-content datasets that require dedicated software tools supporting lipid identification and quantification, efficient data management and lipidome visualization. Here we present a novel software-based platform for streamlined data processing, management and visualization of shotgun lipidomics data acquired using high-resolution Orbitrap mass spectrometry. The platform features the ALEX framework designed for automated identification and export of lipid species intensity directly from proprietary mass spectral data files, and an auxiliary workflow using database exploration tools for integration of sample information, computat…

Databases FactualComputer scienceData managementlcsh:MedicineBioinformaticscomputer.software_genreMass spectrometryMiceUser-Computer InterfaceData visualizationLipidomicsAnimalslcsh:ScienceInternetMultidisciplinarybusiness.industrylcsh:RBrainLipid-phosphate phosphataseShotgun lipidomicsLipidomeLipidsVisualizationSoftware frameworkKnockout mouselcsh:QData miningbusinesscomputerSoftwareResearch ArticlePLoS ONE
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A rapid separation of the four major deoxynucleosides and deoxyinosine by high-pressure liquid cation-exchange chromatography

1973

DeoxyribonucleasesChromatographyIon exchangePhosphoric Diester HydrolasesVenomsChemistryDeoxyribonucleotidesIon chromatographyBiophysicsPhosphoric Diester HydrolasesDeoxyribonucleosidesDNACell BiologyAlkaline PhosphataseChromatography Ion ExchangeBiochemistryMicrococcusHigh pressureMethodsPressureMolecular BiologyNucleic acid analogueAnalytical Biochemistry
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Hydrolytic enzymes in the coelomic cells of the polychaeteNereis virens during sexual maturation

1991

Nereis virens were collected between April 1989 and April 1990 at Yerseke, Oosterscheldt Bay, The Netherlands. Activities of the hydrolytic enzymes arylsulfatase, acid phosphatase, N-acetylglucosaminidase, aminopeptidase, and carboxylesterase were investigated in coelomic cells (elaeocytes) of individuals at different stages of maturation as determined by the time course of oocyte growth. On a protein-content basis, up to ten-fold higher specific activities were present in the elaeocytes compared to the body-wall tissue. Acid phosphatase, N-acetylglucosaminidase, leucine aminopeptidase, and long- and medium-chain esterase increased continuously from the beginning to the later stage of sexua…

EcologybiologyAcid phosphataseAquatic ScienceAminopeptidaseEsteraseHistolysisCarboxylesteraseBiochemistrybiology.proteinSexual maturityLeucineArylsulfataseEcology Evolution Behavior and SystematicsMarine Biology
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The telltale structures of epoxide hydrolases.

2003

Traditionally, epoxide hydrolases (EH) have been regarded as xenobiotic-metabolizing enzymes implicated in the detoxification of foreign compounds. They are known to play a key role in the control of potentially genotoxic epoxides that arise during metabolism of many lipophilic compounds. Although this is apparently the main function for the mammalian microsomal epoxide hydrolase (mEH), evidence is now accumulating that the mammalian soluble epoxide hydrolase (sEH), despite its proven role in xenobiotic metabolism, also has a central role in the formation and breakdown of physiological signaling molecules. In addition, a certain class of microbial epoxide hydrolases has recently been identi…

Epoxide hydrolase 2Models MolecularStereochemistryPhosphatase10050 Institute of Pharmacology and Toxicology610 Medicine & health3000 General Pharmacology Toxicology and PharmaceuticsHydrolase2736 Pharmacology (medical)AnimalsHumansPharmacology (medical)Computer SimulationGeneral Pharmacology Toxicology and PharmaceuticsEpoxide hydrolaseBiotransformationchemistry.chemical_classificationEpoxide HydrolasesbiologyActive siteEnzymechemistryBiochemistryMicrosomal epoxide hydrolaseEpoxide Hydrolasesbiology.protein570 Life sciences; biologyEpoxy CompoundsRhizobiumDrug metabolism reviews
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Phosphotransferase properties of human erythrocyte phosphoglycolate phosphatase.

1982

Abstract 1. 1. Human erythrocyte phosphoglycolate phosphatase (PGP) (EC 3.1.3.18) shows transferase properties. Using p -nitrophenylphosphate ( p -NPP) as substrate, methanol, at a concentration of 4.9 M. was the most efficient phosphate acceptor tested (60% phosphate transfer). 2. 2. The branched alcohols i -propanol and i -butanol accept the phosphate better than the unbranched compounds. The acceptor potency is methanol > ethanol > i -propanol > n -propanol > i -butanol > n -butanol. 3. 3. The relative transferase activity could be demonstrated to be independent of substrate concentration, pH. and the inhibitory effect of NaF at 2 and 4 mM. 4. 4. POP shows no transferase activity towards…

ErythrocytesStereochemistryButanolMethanolPhosphotransferasesFructosePhosphateBiochemistryPhosphoric Monoester HydrolasesLactic acidSubstrate SpecificityPhosphotransferasePropanolNitrophenolschemistry.chemical_compoundOrganophosphorus CompoundschemistryBiochemistryAlcoholsTransferaseHumansPhosphoglycolate phosphataseThe International journal of biochemistry
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Exposure to malondialdehyde induces an early redox unbalance preceding membrane toxicity in human erythrocytes.

2002

This work investigated the oxidative injury to human red blood cells (RBCs) by the exposure to exogenous malondialdehyde (MDA), in a physiological environment. When a 10% RBC suspension was incubated in autologous plasma, in the presence of 50 microM MDA, 30% of MDA entered into the cells. A time-course study showed that MDA caused early (30-120 min) and delayed (3-18 h) effects. MDA caused a fast depletion of reduced glutathione, and loss of the glucose-6-phosphate dehydrogenase activity, followed by a decrease of HbO2. Accumulation of methemoglobin, and formation of small amounts of hemichrome were later evident. Also, an HbO2-derived fluorescent product was measured in the membrane. The …

ErythrocytesTime FactorsOxidative phosphorylationmedicine.disease_causeBiochemistryHemolysisMethemoglobinchemistry.chemical_compoundHemoglobinsMalondialdehydemedicineHumansMethemoglobinHemichromeCell MembraneErythrocyte MembraneGeneral MedicineGlutathionemedicine.diseaseMalondialdehydeMolecular biologyHemolysisOxygenSpectrometry FluorescencechemistryBiochemistryGlucose-6-PhosphatasePotassiumElectrophoresis Polyacrylamide GelOxidation-ReductionIntracellularOxidative stressFree radical research
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Expression patterns of matrix genes during human skeletal development.

1994

Extracellular Matrix ProteinsHistologyBone DevelopmentChemistryClinical BiochemistryCell DifferentiationCell BiologyComputational biologyExpression (computer science)Cartilage Oligomeric Matrix ProteinAlkaline PhosphataseMatrix (mathematics)Gene Expression RegulationProtein BiosynthesisBiglycanHumansMatrilin ProteinsLectins C-TypeOsteonectinProteoglycansAggrecansCollagenDecorinGeneGlycoproteinsProgress in histochemistry and cytochemistry
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