Search results for "PHYLOGENY"
showing 10 items of 1398 documents
FIRST MOLECULAR DATA ON DELASTRIA ROSEA, FISCHERULA MACROSPORA AND HYDNOCYSTIS PILIGERA
2011
Several samples of Delastria rosea, Fischerula macrospora and Hydnocystis piligera from the Mediterranean basin are studied, and the first molecular data of these species are reported. A colour plate showing the external morphology of their ascomata is also included.
Body-axis organization in tetrapods: a model-system to disentangle the developmental origins of convergent evolution in deep time
2022
Convergent evolution is a central concept in evolutionary theory but the underlying mechanism has been largely debated since On the Origin of Species . Previous hypotheses predict that developmental constraints make some morphologies more likely to arise than others and natural selection discards those of the lowest fitness. However, the quantification of the role and strength of natural selection and developmental constraint in shaping convergent phenotypes on macroevolutionary timescales is challenging because the information regarding performance and development is not directly available. Accordingly, current knowledge of how embryonic development and natural selection drive phenotypic …
Phylogeny and classification of poison frogs (Amphibia: dendrobatidae), based on mitochondrial 16S and 12S ribosomal RNA gene sequences.
2000
An analysis of partial sequences of the 16S ribosomal rRNA gene (582 bp) of 20 poison frog species (Dendrobatidae) confirmed their phylogenetic relationships to bufonid and leptodactylid frogs. Representatives of the ranoid families and subfamilies Raninae, Mantellinae, Petropedetinae, Cacosterninae, Arthroleptidae, Astylosternidae, and Microhylidae did not cluster as sister group of the Dendrobatidae. Similar results were obtained in an analysis using a partial sequence of the 12S gene (350 bp) in a reduced set of taxa and in a combined analysis. Within the Dendrobatidae, our data supported monophyly of the genus Phyllobates but indicated paraphyly of Epipedobates and Colostethus. Minyobat…
New monophyletic branches of the teloschistaceae (lichen-forming ascproved by three gene phylogenyomycota)
2017
Seventeen robust monophyletic branches newly discovered in the phylogenetic tree of the Teloschistaceae after separate nrITS, nrLSU and mtSSU, as well as combined phylogenetic analysis are proposed to consider as the following separate genera: Dijigiella S. Y. Kondr. et L. Lo′kös gen. nov. for the D. kaernefeltiana group, Elixjohnia S. Y. Kondr. et J.-S. Hur gen. nov. for the Sirenophila jackelixii group, Fominiella S. Y. Kondr., D. Upreti et J.-S. Hur gen. nov. for the F. tenerifensis group; Gintarasiella S. Y. Kondr. et J.-S. Hur gen. nov. for Caloplaca aggregata, Hanstrassia S. Y. Kondr. gen. nov. for the Elenkiniana lenae group, Harusavskia S. Y. Kondr. gen. nov. for H. elenkinianoides …
New findings of Setaria tundra and Setaria cervi in the red deer (Cervus elaphus) in Poland
2019
AbstractOur study aimed at examining the phylogenetic position of the newly-found Setaria nematodes obtained from the red deer (Cervus elaphus) based on sequences of the mitochondrial cytochrome c oxidase subunit 1 (COX-1). Alignment and phylogenetic analyses, as well as SEM microscopic analysis, revealed the presence of two Setaria species: S. cervi and S. tundra. Setaria tundra was noted in only one individual, a calf of the red deer, while S. cervi was observed in three stages, two hinds and one calf of the red deer. According to our knowledge, it is the first case of S. cervi in the red deer in Poland confirmed in molecular studies and also the first case of S. tundra infection in the r…
Ancient recruitment by chromists of green algal genes encoding enzymes for carotenoid biosynthesis.
2008
Chromist algae (stramenopiles, cryptophytes, and haptophytes) are major contributors to marine primary productivity. These eukaryotes acquired their plastid via secondary endosymbiosis, whereby an early-diverging red alga was engulfed by a protist and the plastid was retained and its associated nuclear-encoded genes were transferred to the host genome. Current data suggest, however, that chromists are paraphyletic; therefore, it remains unclear whether their plastids trace back to a single secondary endosymbiosis or, alternatively, this organelle has resulted from multiple independent events in the different chromist lineages. Both scenarios, however, predict that plastid-targeted, nucleus-…
Range size: Disentangling Current Traits and Phylogenetic and Biogeographic Factors
2006
The range size of a species can be determined by its current traits and by phylogenetic and biogeographic factors. However, only rarely have these factors been studied in combination. We use data on the geographic range sizes of all 26 Sylvia warblers to explicitly test whether range size was determined by current species-specific traits (e.g., body size, dispersal ability), phylogenetic factors (e.g., age of the lineage), or environmental, biogeographic factors (e.g., latitudinal position of the range). The results demonstrated that current traits and phylogenetic and biogeographic factors were interrelated. While a number of factors were significant in simple regression analyses, only one…
The Phylogenetic position of Daubentonia madagascariensis (Gmelin, 1788; primates, Strepsirhini) as revealed by chromosomal analysis
2012
One of the major topics in primate evolution is the phylogenetic position of the bizarre Daubentonia madagascariensis (DMA, aye-aye). The principal points that have been discussed for many decades are whether the aye-aye is: (i) the sister group of primates; (ii) the sister group of strepsirhines; or (iii) the sister group of lemurs. Very little is known about Daubentonia evolution, particularly on the chromosomal background. The present report focuses on the chromosomal history of this species. We used available chromosome painting data as the main source to identify conserved chromosomes, chromosomal segments and syntenic associations that have characterized the aye-aye karyotype. The dat…
Testing reticulate versus coalescent origins of Erica lusitanica using a species phylogeny of the northern heathers (Ericeae, Ericaceae).
2015
Whilst most of the immense species richness of heathers (Calluna, Daboecia and Erica: Ericeae; Ericaceae) is endemic to Africa, particularly the Cape Floristic Region, the oldest lineages are found in the Northern Hemisphere. We present phylogenetic hypotheses for the major clades of Ericeae represented by multiple accessions of all northern Erica species and placeholder taxa for the large nested African/Madagascan clade. We identified consistent, strongly supported conflict between gene trees inferred from ITS and chloroplast DNA sequences with regard to the position of Erica lusitanica. We used coalescent simulations to test whether this conflict could be explained by coalescent stochasti…
Assessing divergence time of Spirulida and Sepiida (Cephalopoda) based on hemocyanin sequences
2011
Abstract The phylogenetic position of the mesopelagic decabrachian cephalopod Spirula is still a matter of debate. Since hemocyanin has successfully been used to calibrate a molecular clock for many molluscan species, a molecular clock was calculated based on this gene with special attention to the cephalopod genera Spirula and Sepia. The obtained partial sequence comprising ca., one third (3567 bp) of the complete gene is similar to that of Sepia officinalis. The molecular clock was calibrated using the splits of Gastropoda–Cephalopoda (ca. 550 ± 50 mya) and Heterobranchia–Vetigastropoda (ca. 380 ± 10 mya). The resulting hemocyanin-based molecular clock is stable, and the estimated diverge…