Search results for "PLASMA"

showing 10 items of 4043 documents

Multiple Site-Specific Binding of Fis Protein to Escherichia coli nuoA-N Promoter DNA and its Impact on DNA Topology Visualised by Means of Scanning …

2004

DNA BacterialPlasma protein bindingMicroscopy Atomic Forcemedicine.disease_causeBiochemistryBacterial geneticsMitochondrial Proteinschemistry.chemical_compoundScanning probe microscopyMicroscopyEscherichia coliImage Processing Computer-AssistedmedicinePromoter Regions GeneticMolecular BiologyEscherichia coliDNA PrimersReverse Transcriptase Polymerase Chain ReactionOrganic ChemistryMembrane ProteinsPromoterMolecular biologyMembrane proteinchemistryMolecular MedicineDNAProtein BindingChemBioChem
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Development and validation of two PCR tests for the detection of and differentiation between Anaplasma ovis and Anaplasma marginale

2012

Anaplasma ovis and Anaplasma marginale are tick-transmitted bacteria that cause anaplasmosis in domestic and wild animals. Recent results show that some domestic and wild animals and ticks are susceptible to both A. ovis and A. marginale, thus supporting the need to differentiate between these species in hosts and ticks diagnosed with Anaplasma infection. However, although anaplasmosis is one of the most common diseases of grazing animals worldwide, rapid and effective tests are not available for the detection of and discrimination between these 2 Anaplasma species. The objective of this research was to develop an easy and reliable method to identify and discriminate between the closely rel…

DNA BacterialVeterinary MedicineAnaplasmosisAnaplasmaSequence analysisMolecular Sequence DataMicrobiologySensitivity and SpecificityBacterial geneticslaw.inventionMajor surface protein 4Bacterial Proteinslawparasitic diseasesAnaplasma Diagnostics major surface protein 4 Polymerase Chain ReactionmedicineAnimalsAnaplasmaPathogenOvisDiagnosticsPolymerase chain reactionDNA PrimersBacteriological TechniquesbiologyAnaplasma ovisAnaplasma ovisSequence Analysis DNAbiology.organism_classificationmedicine.diseaseVirologyPolymerase chain reactionAnaplasma marginaleInfectious DiseasesMolecular Diagnostic TechniquesInsect ScienceParasitologyAnaplasmosis
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Acquisition of Structure-guiding and Structure-forming Properties during Maturation from the Pro-silicatein to the Silicatein Form

2012

Silicateins are the key enzymes involved in the enzymatic polycondensation of the inorganic scaffold of the skeletal elements of the siliceous sponges, the spicules. The gene encoding pro-silicatein is inserted into the pCold TF vector, comprising the gene for the bacterial trigger factor. This hybrid gene is expressed in Escherichia coli and the synthesized fusion protein is purified. The fusion protein is split into the single proteins with thrombin by cleavage of the linker sequence present between the two proteins. At 23 °C, the 87 kDa trigger factor-pro-silicatein fusion protein is cleaved to the 51 kDa trigger factor and the 35 kDa pro-silicatein. The cleavage process proceeds and res…

DNA ComplementaryPolymersRecombinant Fusion Proteins02 engineering and technologyPlasma protein bindingCleavage (embryo)Models BiologicalBiochemistry03 medical and health sciencesThrombinPEG ratioEscherichia colimedicineAnimalsMolecular Biology030304 developmental biologychemistry.chemical_classification0303 health sciencesbiologyPhotoelectron SpectroscopyTemperatureThrombinCell Biology021001 nanoscience & nanotechnologybiology.organism_classificationFusion proteinElasticityExtracellular MatrixPoriferaEnzymechemistryBiochemistryProtein Structure and FoldingPeptidesSuberites0210 nano-technologyHydrophobic and Hydrophilic InteractionsLinkerProtein Bindingmedicine.drugSuberitesJournal of Biological Chemistry
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Interaction between turbulent structures and particles in roughened channel

2016

Abstract The distribution of inertial particles in turbulent flows is highly non-uniform and is driven by the local dynamics of the turbulent structures of the underlying carrier flow field. In the specific context of dilute particle-laden wall-bounded flows, deposition and resuspension mechanisms are dominated by the interaction between inertial particles and coherent turbulent structures characteristic of the wall region. The macroscopic behavior of these two-phase systems is influenced by particle inertia, which plays a role at the microscale of a single dispersed element. These turbulent structures, which control the turbulent regeneration cycles, are strongly affected by the wall rough…

DNSmedia_common.quotation_subjectDirect numerical simulationGeneral Physics and AstronomyContext (language use)Lagrangian particle trackingInertia01 natural sciencesSettore ICAR/01 - Idraulica010305 fluids & plasmasPhysics::Fluid DynamicsPhysics and Astronomy (all)symbols.namesake0103 physical sciences010306 general physicsDispersion (water waves)media_commonFluid Flow and Transfer ProcessesPhysicsTurbulenceMechanical EngineeringParticle-laden flowReynolds numberMechanicsTurbulenceClassical mechanicssymbolsParticleLagrangian trackingParticle mass fluxRoughneInternational Journal of Multiphase Flow
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Inverse Conformational Selection in Lipid–Protein Binding

2021

International audience; Interest in lipid interactions with proteins and other biomolecules is emerging not only in fundamental biochemistry but also in the field of nanobiotechnology where lipids are commonly used, for example, in carriers of mRNA vaccines. The outward-facing components of cellular membranes and lipid nanoparticles, the lipid headgroups, regulate membrane interactions with approaching substances, such as proteins, drugs, RNA, or viruses. Because lipid headgroup conformational ensembles have not been experimentally determined in physiologically relevant conditions, an essential question about their interactions with other biomolecules remains unanswered: Do headgroups excha…

DYNAMICSELECTRIC CHARGEBILAYERSPHOSPHATIDYLCHOLINE HEADGROUPMembrane lipidsDEUTERIUMPlasma protein bindingMolecular Dynamics Simulationlipidit010402 general chemistry01 natural sciencesBiochemistrybiomolekyylitCatalysis03 medical and health sciencesMolecular dynamicskemialliset sidoksetColloid and Surface ChemistryProtein structurePHOSPHOLIPID-BINDINGMAGNETIC-RESONANCE[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologySEGMENTAL ORDER[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyConformational ensemblesNuclear Magnetic Resonance Biomolecular030304 developmental biologychemistry.chemical_classification0303 health sciencesChemistryBiomoleculeMEMBRANE-LIPIDSProteinsPhosphatidylglycerolsGeneral Chemistrycomputer.file_formatProtein Data BankLipids0104 chemical sciencesBiophysicsPhospholipid BindingPhosphatidylcholinesMAS NMR1182 Biochemistry cell and molecular biologylipids (amino acids peptides and proteins)proteiinitcomputerProtein Binding
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Anomalous transport effects on switching currents of graphene-based Josephson junctions

2017

We explore the effect of noise on the ballistic graphene-based small Josephson junctions in the framework of the resistively and capacitively shunted model. We use the non-sinusoidal current-phase relation specific for graphene layers partially covered by superconducting electrodes. The noise induced escapes from the metastable states, when the external bias current is ramped, give the switching current distribution, i.e. the probability distribution of the passages to finite voltage from the superconducting state as a function of the bias current, that is the information more promptly available in the experiments. We consider a noise source that is a mixture of two different types of proce…

DYNAMICSJosephson effectJosephson junctionsGaussianFOS: Physical sciencesgraphemeBioengineering01 natural sciencesNoise (electronics)Settore FIS/03 - Fisica Della Materia010305 fluids & plasmaslaw.inventionsymbols.namesakelawJosephson junction0103 physical sciencesMesoscale and Nanoscale Physics (cond-mat.mes-hall)Graphene; Josephson junctions; Levy processes; Non-thermal noise; Bioengineering; Chemistry (all); Materials Science (all); Mechanics of Materials; Mechanical Engineering; Electrical and Electronic EngineeringMechanics of MaterialGeneral Materials ScienceElectrical and Electronic Engineering010306 general physicsPhysicsSuperconductivityLevy processesCondensed matter physicsCondensed Matter - Mesoscale and Nanoscale PhysicsGrapheneMechanical EngineeringSTABLE RANDOM-VARIABLESChemistry (all)Non-thermal noiseBiasingGeneral ChemistryGraphene; Josephson junctions; Levy processes; Non-thermal noise; STABLE RANDOM-VARIABLES; DYNAMICSLevy processeMechanics of MaterialsPhysics - Data Analysis Statistics and ProbabilitysymbolsProbability distributionMaterials Science (all)GrapheneTransport phenomenaData Analysis Statistics and Probability (physics.data-an)
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Connection between optimal control theory and adiabatic-passage techniques in quantum systems

2012

This work explores the relationship between optimal control theory and adiabatic passage techniques in quantum systems. The study is based on a geometric analysis of the Hamiltonian dynamics constructed from the Pontryagin Maximum Principle. In a three-level quantum system, we show that the Stimulated Raman Adiabatic Passage technique can be associated to a peculiar Hamiltonian singularity. One deduces that the adiabatic pulse is solution of the optimal control problem only for a specific cost functional. This analysis is extended to the case of a four-level quantum system.

DYNAMICSN-LEVEL SYSTEMSStimulated Raman adiabatic passageFOS: Physical sciences01 natural sciencesPULSE SEQUENCES010305 fluids & plasmasOpen quantum systemDESIGNQuantum mechanicsPhysics - Chemical Physics0103 physical sciences010306 general physicsAdiabatic processPhysicsChemical Physics (physics.chem-ph)Quantum PhysicsALGORITHMSAdiabatic quantum computationAtomic and Molecular Physics and OpticsNMRClassical mechanicsGeometric phaseAdiabatic invariantPOPULATION TRANSFERQuantum algorithmSTIRAPQuantum Physics (quant-ph)Hamiltonian (control theory)
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Modeling crowd dynamics through coarse-grained data analysis

2018

International audience; Understanding and predicting the collective behaviour of crowds is essential to improve the efficiency of pedestrian flows in urban areas and minimize the risks of accidents at mass events. We advocate for the development of crowd traffic management systems, whereby observations of crowds can be coupled to fast and reliable models to produce rapid predictions of the crowd movement and eventually help crowd managers choose between tailored optimization strategies. Here, we propose a Bi-directional Macroscopic (BM) model as the core of such a system. Its key input is the fundamental diagram for bi-directional flows, i.e. the relation between the pedestrian fluxes and d…

Data AnalysisOperations researchComputer scienceFLOW[INFO.INFO-GR] Computer Science [cs]/Graphics [cs.GR]macroscopic model0904 Chemical EngineeringTransportation02 engineering and technologycomputer.software_genre01 natural sciences010305 fluids & plasmas[SHS]Humanities and Social Sciences[SCCO]Cognitive scienceCrowds0903 Biomedical Engineering0102 Applied Mathematics11. Sustainability0202 electrical engineering electronic engineering information engineeringCluster AnalysisApplied Mathematicsbi-directional fluxcollective behaviourGeneral Medicine[INFO.INFO-GR]Computer Science [cs]/Graphics [cs.GR]Computational MathematicsCore (game theory)Modeling and Simulation[SCCO.PSYC]Cognitive science/Psychology020201 artificial intelligence & image processingGeneral Agricultural and Biological SciencesLife Sciences & BiomedicineBEHAVIORCrowd dynamicsRelation (database)Bioinformatics[MATH.MATH-DS]Mathematics [math]/Dynamical Systems [math.DS]BioengineeringPedestrianModels PsychologicalMachine learningAdvanced Traffic Management SystemPedestrian traffic0103 physical sciencesHumansComputer Simulation[NLIN.NLIN-AO]Nonlinear Sciences [physics]/Adaptation and Self-Organizing Systems [nlin.AO]Block (data storage)Science & Technologybusiness.industryMathematical ConceptsSIMULATIONSdata-based modelingCrowdingKey (cryptography)Artificial intelligenceMathematical & Computational Biologybusinesscomputer
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Provenance of Early Bronze Age Metal Artefacts in Western Switzerland Using Elemental and Lead Isotopic Compositions

2011

DatabaseLA laser ablationLead isotope ratios[SHS.ARCHEO] Humanities and Social Sciences/Archaeology and Prehistory[SHS.ARCHEO]Humanities and Social Sciences/Archaeology and Prehistory[ SHS.ARCHEO ] Humanities and Social Sciences/Archaeology and PrehistoryMaterial provenanceElemental compositionICP-MS inductively coupled plasma mass spectrometryEarly bronze ageCopper oresValais (Switzerland)Copper artefacts
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δ30Si and δ29Si Determinations on USGS BHVO-1 and BHVO-2 Reference Materials with a New Configuration on a Nu Plasma Multi-Collector ICP-MS

2008

We report silicon isotopic determinations for USGS rock reference materials BHVO-1 and BHVO-2 using a Nu Plasma multi-collector (MC)-ICP-MS, upgraded with a new adjustable entrance slit, to obtain medium resolution, as well as a stronger primary pump and newly designed sampler and skimmer cones ("B" cones). These settings, combined with the use of collector slits, allowed a resolution to be reached that was sufficient to overcome the (NO)-N-14-O-16 and N-14(2) interferences overlying the Si-30 and the Si-28 peaks, respectively, in an earlier set-up. This enabled accurate measurement of both delta Si-30 and delta Si-29. The delta value is expressed in per mil variation relative to the NBS 28…

DeltaAnalytical chemistryMineralogyGeologyPlasmaOcean island basaltMedium resolutionGeochemistry and PetrologyChondriteIsotopes of siliconMC-ICP-MSQuartzInductively coupled plasma mass spectrometryGeology
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