Search results for "PLIF"

showing 10 items of 835 documents

Direct squencing from the minimal number of DNA molecules needed to fill a 454 picotiterplate

2014

Notice of Republication: This article was republished on June 17, 2014, to correct an error in the title. The publisher apologizes for the error. In addition, a typographical error was corrected in the Abstract. Please download this article again to view the correct version. The originally published, uncorrected article and the republished, corrected article are provided here for reference.

ScienceSequence assemblyHybrid genome assemblyBiologyDNA sequencingDeep sequencingGens humans MapatgeSequencing by hybridizationMapatgeEscherichia coliGeneticsCluster AnalysisGenome SequencingMolecular Biology TechniquesSequencing TechniquesMolecular BiologyGene LibraryGeneticsWhole Genome AmplificationMultidisciplinaryGenètica bacterianaShotgun sequencingQRMultiple displacement amplificationChromosome MappingHigh-Throughput Nucleotide SequencingBiology and Life SciencesComputational BiologySequence Analysis DNAGenomicsGenome AnalysisGens humansMedicineSequence AnalysisGenome BacterialResearch Article
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Reply to comment by C. Morhange, C. Flaux, P.A. Pirazzoli, M.B. Carre on “Holocene Sea level Change in Malta”

2013

The pits of Birzebbugia are located near the present-day mean sea level, and some are partially submerged. They were dated using pottery discovered in an archaeological site close to the coast, dated to the Bronze Age (Zammit, 1928; Abela, 1999). As they have been interpreted as sites for the retting of flax, during their utilization they should have remained dry and the sea could not submerge them. This is the reason why these structures are not directly related to the sea level, as suggested by Biolchi et al. (2011), so they represent an upper limit.

Sea level changeClimatic changes -- MaltaSea level -- MaltaSettore GEO/02 - Geologia Stratigrafica E SedimentologicaMaltaSettore GEO/04 - Geografia Fisica E Geomorfologiasea level change; Malta;upliftPaleoecology -- MaltaGeographyOceanographyPalynology -- Maltaupliftsea level changeHoloceneEarth-Surface Processes
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Exploiting the optical quadratic nonlinearity of zinc-blende semiconductors for guided-wave terahertz generation: A material comparison

2010

We present a detailed analysis and comparison of dielectric waveguides made of CdTe, GaP, GaAs and InP for modal phase matched optical difference frequency generation (DFG) in the terahertz domain. From the form of the DFG equations, we derived the definition of a very general figure of merit (FOM). In turn, this FOM enabled us to compare different configurations, by taking into account linear and nonlinear susceptibility dispersion, terahertz absorption, and a rigorous evaluation of the waveguide modes properties. The most efficient waveguides found with this procedure are predicted to approach the quantum efficiency limit with input optical power in the order of kWs.

Semiconductor waveguidesTerahertz radiationPhase (waves)FOS: Physical sciencesPhysics::OpticsOptical powerFrequency conversionSettore ING-INF/01 - ElettronicaOptical pulse generationSemiconductor materialsDispersion (optics)Optical phase matchingFigure of meritOptical parametric amplifiersElectrical and Electronic EngineeringOptical propagation in nonlinear mediaPhysicsGuided wave testingbusiness.industryOptical frequency conversionCondensed Matter PhysicsAtomic and Molecular Physics and OpticsOptical waveguidesNonlinear systemOptical materialsTerahertz generationOptoelectronicsOptical frequency conversion Optical materials Optical parametric amplifiers Optical phase matching Optical propagation in nonlinear media Optical pulse generation Optical waveguides Frequency conversion Semiconductor materials Semiconductor waveguidesQuantum efficiencybusinessOptics (physics.optics)Physics - OpticsIEEE Journal of Quantum Electronics
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La conférence du Columa 2013 racontée par des étudiants AgroSup-Dijon

2014

Document accessible depuis la notice de ProdInra : https://prodinra.inra.fr/?locale=en#!ConsultNotice:306111; La 22e conférence du Columa de l’AFPP, tenue à Dijon du 11 au 13 décembre 2013, a été suivie par des étudiants d’AgroSup-Dijon. Ils rendent compte ici de ce qu’ils en ont retenu. Ils analysent particulièrement les sessions : – « Nuisibilité » des adventices (indirecte, ex. : favoriser l’ergot, et directe). – « Cultures méditerranéennes et tropicales » (différences Dom-Tom/autres pays, techniques émergentes). – « Résistance » (extension, mécanismes, facteurs de risque). – « Transfert aux milieux » (facteurs de risque de pollution des eaux, suivis et modélisation pour les prévoir). – …

Semis directBiocontrôleRotationAgronomie[SDV]Life Sciences [q-bio]Méthodes alternatives[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studyAdventicesDésherbage mécanique[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyNuisibilitéculture intégréerésistance[SDV.SA.SDS] Life Sciences [q-bio]/Agricultural sciences/Soil studyTSCCarabidésMauvaises herbesErgot du seigleTechniques culturales sans labourHerbicidesTCSLmauvaises herbes;adventices;nuisibilité;ergot du seigle;herbicides;résistance;transfert aux milieux;techniques culturales simplifiées;TSC;techniques culturales sans labour;TCSL;semis direct;méthodes alternatives;désherbage mécanique;biocontrôle;carabidés;rotation;culture intégrée;agronomie;système de culture[SDV] Life Sciences [q-bio]transfert aux milieux[SDE]Environmental Sciencestechniques culturales simplifiéesSystème de culture
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La manovra finanziaria prevista dalla legge n. 133/2008. Le comunicazioni elettroniche e l'energia (artt. 2, 7 e 8)

2008

Semplificazione amministrativa. Infrastrutture di rilevanza pubblica.Settore IUS/10 - Diritto Amministrativo
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La formazione della dirigenza locale per la semplificazione

2009

Semplificazione amministrazione dirigenzaformazione; dirigenza; semplificazioneformazioneSettore SPS/07 - Sociologia Generaledirigenzasemplificazione
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Diagnosis of flavobacteriosis by direct amplification of rRNA genes

2002

A broad-range bacterial PCR method with universal 16S rDNA targeting primers and bacterial cultivation was used to identify the putative pathogen in flavobacterial outbreaks. Restriction fragment length polymorphism (PCR-RFLP) analysis and sequencing of the partial 16S rDNA PCR products of 10 skin samples and 10 representative isolates derived from the same fish specimens revealed differences between direct molecular and cultivation-based analysis. Flavobacterium columnare-like sequences dominated in the direct molecular analysis in most cases, whereas most of the isolates belonged to a phylogenetically heterogeneous group of flavobacteria clustering with F. hibernum. F. columnare was isola…

Sequence HomologyAquatic ScienceDNA RibosomalFlavobacteriumMicrobiologySpecies SpecificityPhylogeneticsPseudomonasRNA Ribosomal 16SAnimalsPhylogenyEcology Evolution Behavior and SystematicsGeneticsBase SequencebiologyPseudomonasGene AmplificationRibosomal RNA16S ribosomal RNAbiology.organism_classificationFlavobacteriaceaeRestriction fragment length polymorphismGram-Negative Bacterial InfectionsSequence AlignmentPolymorphism Restriction Fragment LengthBacteriaFlavobacteriumDiseases of Aquatic Organisms
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Phenotypic and genotypic characterization of a new fish-virulent Vibrio vulnificus serovar that lacks potential to infect humans.

2007

Vibrio vulnificus is a bacterial species that is virulent for humans and fish. Human isolates are classified into biotypes 1 and 3 (BT1 and BT3) and fish isolates into biotype 2 (BT2). However, a few human infections caused by BT2 isolates have been reported worldwide (zoonosis). These BT2 human isolates belong to serovar E (SerE), which is also present in diseased fish. The aim of the present work was to characterize a new BT2 serovar [serovar A (SerA)], which emerged in the European fish-farming industry in 2000, by means of phenotypic, serological and genetic [plasmid profiling, ribotyping and random amplified polymorphic DNA (RAPD)] methodologies. The results confirmed that SerA constit…

SerotypeDNA BacterialLipopolysaccharidesGenotypeVirulenceVibrio vulnificusMicrobiologyRibotypingMicrobiologySerologyRibotypingFish DiseasesMiceGenotypemedicineAnimalsCluster AnalysisHumansSerum Bactericidal TestSerotypingVibrio vulnificusMice Inbred BALB CEelsbiologyVirulenceZoonosisbiology.organism_classificationmedicine.diseaseDNA FingerprintingRAPDRandom Amplified Polymorphic DNA TechniqueDisease Models AnimalPhenotypeVibrio InfectionsPlasmidsMicrobiology (Reading, England)
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A Polyphasic Approach to Study the Intraspecif ic Diversity Amongst Vibrio vulnificus Isolates

1997

Summary A polyphasic taxonomic approach using phenotypic and molecular genetic techniques, was carried out on the species Vibrio vulnificus in order to study its intraspecific diversity. Seven techniques, including phenotypic (API 20E, BIOLOG, total protein profiles, serotyping, ELISA), and genotypic methods (ribotyping and AFLP), were employed on 80 V. vulnificus strains of biotypes 1 and 2, including 9 reference cultures. The isolates came from different geographic origins (USA, Spain, Belgium, Sweden, Norway, Japan, Thailand) and types of samples (clinical, health/diseased fish, seafood, water). Diversity indexes calculated for strains of both biotypes revealed a higher phenotypic and ge…

SerotypeGeneticsGenetic diversitybiologyVibrio vulnificusbiology.organism_classificationApplied Microbiology and BiotechnologyMicrobiologyMicrobiologyRibotypingDNA profilingGenotypeAmplified fragment length polymorphismTypingEcology Evolution Behavior and SystematicsSystematic and Applied Microbiology
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Evaluation of a modified single-enzyme amplified fragment length polymorphism (SE-AFLP) technique for subtyping Salmonella enterica serotype Enteriti…

2006

Salmonella enterica subsp. enterica serotype Enteritidis is not readily subtyped beyond the level of phage type (PT). Pulsed field gel electrophoresis (PFGE) is generally acknowledged to be the most discriminating typing method for Salmonella, but only a restricted variety of PFGE types has been described for S. enterica serotype Enteritidis. In the present study, a modification of the SE-AFLP typing method was used to investigate both outbreak and apparently sporadic isolates of S. enterica serotype Enteritidis belonging to different PTs and/or PFGE types. The method proved to be as discriminatory as PFGE when combined with phage typing, and provided subtyping data consistent with epidemio…

SerotypeSalmonellaSettore MED/07 - Microbiologia E Microbiologia ClinicaSalmonella enteritidismedicine.disease_causeSettore MED/42 - Igiene Generale E ApplicataMicrobiologySensitivity and SpecificitymedicineHumansTypingMolecular BiologyPhage typingDNA PrimersbiologyGeneral MedicineNucleic acid amplification techniquebiology.organism_classificationSalmonella typing SE-AFLPVirologySubtypingBacterial Typing TechniquesRandom Amplified Polymorphic DNA TechniqueSalmonella enteritidisSalmonella entericaSalmonella InfectionsNucleic Acid Amplification Techniques
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