Search results for "POPULATION"

showing 10 items of 9945 documents

Topological congruence between phylogenies of Anacanthorus spp. (Monogenea: Dactylogyridae) and their Characiformes (Actinopterygii) hosts: A case of…

2017

Cophylogenetic studies aim at testing specific hypotheses to understand the nature of coevolving associations between sets of organisms, such as host and parasites. Monogeneans and their hosts provide and interesting platform for these studies due to their high host specificity. In this context, the objective of the present study was to establish whether the relationship between Anacanthorus spp. with their hosts from the upper Paraná River and its tributaries can be explained by means of cospeciation processes. Nine fish species and 14 monogenean species, most of them host specific, were studied. Partial DNA sequences of the genes RAG1, 16S and COI of the fish hosts and of the genes ITS2, …

0106 biological sciences0301 basic medicineSpeciationlcsh:MedicineAnimal PhylogeneticsCharaciformes01 natural sciencesDatabase and Informatics MethodsRNA Ribosomal 16Slcsh:ScienceDNA extractionPhylogenyData ManagementMultidisciplinaryGeographyPhylogenetic treebiologyEukaryotaPhylogenetic AnalysisPhylogeneticsFreshwater FishPhylogeographyBiogeographyVertebratesCharaciformesSequence AnalysisMonogeneaResearch ArticleComputer and Information SciencesEvolutionary ProcessesBioinformaticsContext (language use)Topology010603 evolutionary biologyHost-Parasite InteractionsElectron Transport Complex IV03 medical and health sciencesExtraction techniquesPhylogeneticsGeneticsAnimalsEvolutionary SystematicsParasite EvolutionTaxonomyHomeodomain ProteinsEvolutionary BiologyPopulation BiologyHost (biology)lcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesDNASequence Analysis DNAbiology.organism_classificationDactylogyridaeResearch and analysis methodsPhylogeographyFish030104 developmental biologyPlatyhelminthsEarth Scienceslcsh:QParasitologyZoologySequence AlignmentPopulation GeneticsPLOS ONE
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Speciation in the Brachionus plicatilis Species Complex

2017

The Brachionus plicatilis species complex is the best-studied example among rotifers where the use of integrative taxonomy, coupling morphology, ecology, physiology, cross-mating experiments, and DNA taxonomy helps disentangling the biological reality of the different species in the complex. Here we review the theoretical and empirical approaches in species definition applied to the B. plicatilis complex, we outline the history of the discovery of the complex, and we explore the evidence in support of the currently accepted presence of 15 species. We review the evidence for long-distance dispersal and for co-occurrence of the species in the complex, including the processes favoring the co-o…

0106 biological sciences0301 basic medicineSpecies complexeducation.field_of_studybiologyPopulationNiche differentiationBrachionusbiology.organism_classification010603 evolutionary biology01 natural sciencesIntraspecific competition03 medical and health sciences030104 developmental biologyEvolutionary biologyBiological dispersalTaxonomy (biology)Dna taxonomyeducationrotifera
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Spoilage potential of Brettanomyces bruxellensis strains isolated from Italian wines

2018

Abstract Brettanomyces bruxellensis is an important wine spoilage agent. In this study a population of Brettanomyces strains isolated from Italian wines was thoroughly investigated to evaluate adaptability to wine conditions and spoilage potential. The presumptive isolates of Brettanomyces were identified at species level with 26S rRNA gene sequencing and species-specific PCR, and subsequently subjected to analysis of intra-species variability through the study of intron splice sites (ISS-PCR). Although, some strains were tracked in wines from different regions, extensive genetic biodiversity was observed within the B. bruxellensis population investigated. All strains were evaluated for the…

0106 biological sciences0301 basic medicineStrain resistanceGenotypeBrettanomyces030106 microbiologyPopulationFood spoilageBrettanomyces bruxellensisBrettanomycesVolatile phenolsWineWine spoilageMicrobial contaminationRibotyping01 natural sciences03 medical and health sciencesVolatile phenolPhenolsSpecies level010608 biotechnologyBrettanomyceFood scienceDNA FungaleducationYeast physiologyPhylogenyWineVolatile Organic Compoundseducation.field_of_studyGenetic diversitybiologydigestive oral and skin physiologyfood and beveragesbiology.organism_classificationItalySettore AGR/16 - MICROBIOLOGIA AGRARIAFood MicrobiologyFood Science
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Widespread plant specialization in the polyphagous planthopper Hyalesthes obsoletus (Cixiidae), a major vector of stolbur phytoplasma: Evidence of cr…

2018

The stolbur phytoplasma vector Hyalesthes obsoletus is generally considered as a polyphagous species associated with numerous wild and cultivated plants. However, recent research in southeastern Europe, the distribution centre of H. obsoletus and the area of most stolbur-inflicted crop diseases, points toward specific host-plant associations of the vector, indicating specific vector-based transmission routes. Here, we study the specificity of populations associated with four host-plants using mitochondrial and nuclear genetic markers, and we evaluate the evolution of host-shifts in H. obsoletus. Host-plant use was confirmed for Convolvulus arvensis, Urtica dioica, Vitex agnus-castus and Cre…

0106 biological sciences0301 basic medicineSympatryHereditySpeciationlcsh:MedicineDisease Vectors01 natural sciencesBiochemistryGeographical LocationsHyalestheslcsh:SciencePhylogenyEnergy-Producing OrganellesMultidisciplinarybiologyGeographyEcologyCixiidaeMitochondrial DNAMitochondriaEuropeNucleic acidsSympatryGenetic MappingPhylogeographyBiogeographySympatric speciationHost-Pathogen InteractionsCellular Structures and OrganellesResearch ArticleGenetic MarkersSpecies complexPhytoplasmaEvolutionary ProcessesEcological MetricsForms of DNAZoologyBioenergetics010603 evolutionary biologyHemiptera03 medical and health sciencesPlanthopperGenetic variationCryptic SpeciationGeneticsAnimalsPlant DiseasesEvolutionary BiologyPopulation Biologylcsh:REcology and Environmental SciencesBiology and Life SciencesSpecies DiversityDNACell Biology15. Life on landbiology.organism_classificationInsect Vectors030104 developmental biologyHaplotypesGenetic markerGenome MitochondrialPeople and PlacesEarth Scienceslcsh:QPopulation Genetics
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Disentangling structural genomic and behavioural barriers in a sea of connectivity

2019

18 pages, 4 tables, 3 figures.-- This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited

0106 biological sciences0301 basic medicineSympatryReproductive IsolationChromosomal rearrangementsPopulation010603 evolutionary biology01 natural sciencesGene flow03 medical and health sciencesBehavioural traitsGeneticsAnimalsGadus14. Life underwaterSelection GeneticAdaptationeducationEcology Evolution Behavior and Systematicseducation.field_of_studySympatric divergencebiologyGenetic DriftHomozygoteGenetic VariationReproductive isolationbiology.organism_classificationSpecial Issue on the Role of Genomic Structural Variants in Adaptation and DiversificationGene flowGenetic divergenceSympatrySpecial Issue: The Role of Genomic Structural Variants in Adaptation and Diversification030104 developmental biologyGadus morhuaSympatric speciationEvolutionary biologyAtlantic codChromosome InversionGenetic FitnessAtlantic cod
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Strength of sexual and postmating prezygotic barriers varies between sympatric populations with different histories and species abundances.

2019

The impact of different reproductive barriers on species or population isolation may vary in different stages of speciation depending on evolutionary forces acting within species and through species' interactions. Genetic incompatibilities between interacting species are expected to reinforce prezygotic barriers in sympatric populations and lead to cascade reinforcement between conspecific populations living within and outside the areas of sympatry. We tested these predictions and studied whether and how the strength and target of reinforcement between Drosophila montana and Drosophila flavomontana vary between sympatric populations with different histories and species abundances. All barri…

0106 biological sciences0301 basic medicineSympatryReproductive IsolationReciprocal crossmedia_common.quotation_subjectPopulationZoologyBiology010603 evolutionary biology01 natural sciences03 medical and health sciencesSexual Behavior AnimalGeneticsAnimalseducationDrosophilaEcology Evolution Behavior and Systematicsmedia_commonPopulation DensityDrosophila montanaeducation.field_of_studyReproductive isolationbiology.organism_classificationBiological EvolutionSpeciationSympatry030104 developmental biologySympatric speciationDrosophilaGeneral Agricultural and Biological SciencesEvolution; international journal of organic evolution
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HorTILLUS—A Rich and Renewable Source of Induced Mutations for Forward/Reverse Genetics and Pre-breeding Programs in Barley (Hordeum vulgare L.)

2018

TILLING (Targeting Induced Local Lesions IN Genomes) is a strategy used for functional analysis of genes that combines the classical mutagenesis and a rapid, high-throughput identification of mutations within a gene of interest. TILLING has been initially developed as a discovery platform for functional genomics, but soon it has become a valuable tool in development of desired alleles for crop breeding, alternative to transgenic approach. Here we present the HorTILLUS ( Hordeum-TILLING-University of Silesia) population created for spring barley cultivar "Sebastian" after double-treatment of seeds with two chemical mutagens: sodium azide (NaN3) and N-methyl-N-nitrosourea (MNU). The populatio…

0106 biological sciences0301 basic medicineTILLINGmedicine.medical_specialtyTILLINGMutantPopulationMutagenesis (molecular biology technique)Plant Sciencelcsh:Plant cultureBiologymedicine.disease_cause01 natural sciencesMNUreverse genetics03 medical and health sciencessodium azideMolecular geneticsmedicinelcsh:SB1-1110educationOriginal ResearchGeneticsMutationeducation.field_of_studybarleyfood and beveragesReverse genetics030104 developmental biologyHordeum vulgaremutation010606 plant biology & botanyFrontiers in Plant Science
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Adaptation to environmental stress at different timescales

2020

Environments are changing rapidly, and to cope with these changes, organisms have to adapt. Adaptation can take many shapes and occur at different speeds, depending on the type of response, the trait, the population, and the environmental conditions. The biodiversity crisis that we are currently facing illustrates that numerous species and populations are not capable of adapting with sufficient speed to ongoing environmental changes. Here, we discuss current knowledge on the ability of animals and plants to adapt to environmental stress on different timescales, mainly focusing on thermal stress and ectotherms. We discuss within-generation responses that can be fast and induced within minute…

0106 biological sciences0301 basic medicineTime FactorsEnvironmental changeAcclimatizationClimate Changemedia_common.quotation_subjectPopulationBiodiversity010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyEpigenesis Genetic03 medical and health sciencesHistory and Philosophy of ScienceStress PhysiologicalevolutionAnimalsHumansEcosystemeducationEcosystemPlant Physiological Phenomenamedia_commoneducation.field_of_studybusiness.industryGeneral NeuroscienceEnvironmental resource managementEnvironmental ExposurePlants15. Life on landAdaptation Physiologicalenvironmental stress030104 developmental biology13. Climate actionEctothermplasticityTraitEnvironmental sciencePsychological resilienceAdaptationbusinesstrangenerational effects
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Testing the enemy release hypothesis: abundance and distribution patterns of helminth communities in grey mullets (Teleostei: Mugilidae) reveal the s…

2017

International audience; The abundance and aggregation patterns of helminth communities of two grey mullet hosts, Liza haematocheilus and Mugil cephalus, were studied across 14 localities in Atlantic and Pacific marine areas. The analysis matched parasite communities of (i) L. haematocheilus across its native and introduced populations (Sea of Japan and Sea of Azov, respectively) and (ii) the introduced population of L. haematocheilus with native populations of M. cephalus (Mediterranean, Azov-Black and Japan Seas). The total mean abundance (TMA), as a feature of the infection level in helminth communities, and slope b of the Taylor’s power law, as a measure of parasite aggregation at the in…

0106 biological sciences0301 basic medicineTotal mean abundancePopulationSpecies distributionIntroduced species010603 evolutionary biology01 natural sciencesHost SpecificityInvasive speciesFish Diseases03 medical and health sciencesSpecies SpecificityAbundance (ecology)AnimalsHelminths[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/Parasitology14. Life underwatereducationeducation.field_of_studybiologyMugil cephalusEcologyMugilHost (biology)030108 mycology & parasitologybiology.organism_classificationTaylor’s lawSmegmamorphaInfectious DiseasesSpecies abundance distributionParasitologyLiza haematocheilusHelminthiasis AnimalIntroduced SpeciesAnimal Distribution
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Survey of five major grapevine viruses infecting Blatina and Žilavka cultivars in Bosnia and Herzegovina

2021

The sanitary status of grapevines has not yet been considered sufficiently in vineyards throughout Bosnia and Herzegovina (BiH). An extensive survey of five major grapevine viruses in the country was carried out in 2019. A total of 630 samples from the two dominant autochthonous cultivars, named Žilavka and Blatina, were tested by DAS-ELISA for the presence of grapevine leafroll-associated viruses (GLRaV-1 and 3), grapevine fleck virus (GFkV), grapevine fanleaf virus (GFLV) and Arabis mosaic virus (ArMV). Eighty-eight % of the samples were positive for at least one virus, and all five viruses were detected, thought with different incidence, i.e. GLRaV-3 (84%), GFLV (43%), GLRaV-1 (14%), GFk…

0106 biological sciences0301 basic medicineVeterinary medicineArtificial Gene Amplification and ExtensionDisease VectorsPathology and Laboratory MedicinePolymerase Chain Reaction01 natural sciencesPlant VirusesMedical ConditionsXiphinemaMedicine and Health SciencesVitisCultivarNematode InfectionsFlowering PlantsPhylogenyData Managementeducation.field_of_studyMultidisciplinarybiologyPhylogenetic treeQREukaryotaPhylogenetic AnalysisGrapevine fanleaf virusPlantsPhylogeneticsInfectious DiseasesMedical MicrobiologyViral PathogensVirusesMedicineRNA ViralGrapevineViral VectorsPathogensPlant ViruseResearch ArticleComputer and Information SciencesSciencePopulationPlant DiseaseResearch and Analysis Methodsno key wordsMicrobiologyVirusArabis mosaic virus03 medical and health sciencesVirologyParasitic DiseasesEvolutionary SystematicsMolecular Biology TechniqueseducationMolecular BiologyMicrobial PathogensTaxonomyPlant DiseasesBosnia and HerzegovinaEvolutionary BiologyGenetic diversityOrganismsBiology and Life SciencesSettore AGR/12 - Patologia VegetaleReverse Transcriptase-Polymerase Chain Reactionbiology.organism_classificationVector-Borne DiseasesSpecies Interactions030104 developmental biologyViral Transmission and Infection010606 plant biology & botany
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