Search results for "Partition"

Aroma Volatility from Aqueous Sucrose Solutions at Low and Subzero Temperatures

2004

International audience; The gas-liquid partition coefficients of ethyl acetate and ethyl hexanoate have been measured in water and aqueous sucrose solutions from 25 to -10 degrees C by dynamic headspace. Experiments were carried out on sucrose solutions at temperatures where no ice formation was possible. Results showed that when sucrose concentration increased, aroma volatility increased except for ethyl hexanoate and in the highest sucrose concentration solution (57.5%). A quasi-linear temperature decrease on aroma volatility was observed in sucrose solutions from 25 to around 4 and 0 degrees C. Then, from 0 to -10 degrees C, aroma volatility did not decrease: ethyl acetate volatility rem…

Differing trophic niches of three French stygobionts and their implications for conservation of endemic stygofauna

2019

1. Groundwater ecosystems represent the greatest proportion of unfrozen freshwa- ter on Earth and harbour high numbers of rare taxa with restricted distributions. Stygofaunal abundance, species richness, and ecology play essential roles in groundwater ecosystem services and functioning, as well as providing an impor- tant contribution to global biodiversity. However, as global depletion and contam- ination of groundwater pose serious and often irreversible threats to stygofauna, more information is urgently needed about the ecology of rare groundwater spe- cies to guide effective strategies for their conservation or restoration. 2. In this study, analyses of carbon and nitrogen stable isoto…

Partitioning net carbon dioxide fluxes into photosynthesis and respiration using neural networks

2020

Abstract The eddy covariance (EC) technique is used to measure the net ecosystem exchange (NEE) of CO2 between ecosystems and the atmosphere, offering a unique opportunity to study ecosystem responses to climate change. NEE is the difference between the total CO2 release due to all respiration processes (RECO), and the gross carbon uptake by photosynthesis (GPP). These two gross CO2 fluxes are derived from EC measurements by applying partitioning methods that rely on physiologically based functional relationships with a limited number of environmental drivers. However, the partitioning methods applied in the global FLUXNET network of EC observations do not account for the multiple co‐acting…

MARL-Ped+Hitmap: Towards Improving Agent-Based Simulations with Distributed Arrays

2016

Multi-agent systems allow the modelling of complex, heterogeneous, and distributed systems in a realistic way. MARL-Ped is a multi-agent system tool, based on the MPI standard, for the simulation of different scenarios of pedestrians who autonomously learn the best behavior by Reinforcement Learning. MARL-Ped uses one MPI process for each agent by design, with a fixed fine-grain granularity. This requirement limits the performance of the simulations for a restricted number of processors that is lesser than the number of agents. On the other hand, Hitmap is a library to ease the programming of parallel applications based on distributed arrays. It includes abstractions for the automatic parti…

Higher Degree F-transforms Based on B-splines of Two Variables

2016

The paper deals with the higher degree fuzzy transforms (F-transforms with polynomial components) for functions of two variables in the case when two-dimensional generalized fuzzy partition is given by B-splines of two variables. We investigate properties of the direct and inverse F-transform in this case and prove that using B-splines as basic functions of fuzzy partition allows us to improve the quality of approximation.

2016

The growth of next-generation sequencing (NGS) datasets poses a challenge to the alignment of reads to reference genomes in terms of alignment quality and execution speed. Some available aligners have been shown to obtain high quality mappings at the expense of long execution times. Finding fast yet accurate software solutions is of high importance to research, since availability and size of NGS datasets continue to increase. In this work we present an efficient parallelization approach for NGS short-read alignment on multi-core clusters. Our approach takes advantage of a distributed shared memory programming model based on the new UPC++ language. Experimental results using the CUSHAW3 alig…

parSRA: A framework for the parallel execution of short read aligners on compute clusters

2018

The growth of next generation sequencing datasets poses as a challenge to the alignment of reads to reference genomes in terms of both accuracy and speed. In this work we present parSRA, a parallel framework to accelerate the execution of existing short read aligners on distributed-memory systems. parSRA can be used to parallelize a variety of short read alignment tools installed in the system without any modification to their source code. We show that our framework provides good scalability on a compute cluster for accelerating the popular BWA-MEM and Bowtie2 aligners. On average, it is able to accelerate sequence alignments on 16 64-core nodes (in total, 1024 cores) with speedup of 10.48 …

Odorant Metabolism Analysis by an Automated Ex Vivo Headspace Gas-Chromatography Method

2015

International audience; In the olfactory epithelium (OE), odorant metabolizing enzymes have the dual function of volatile component detoxification and active clearance of odorants from the perireceptor environment to respectively maintain the integrity of the tissues and the sensitivity of the detection. Although emphasized by recent studies, this enzymatic mechanism is poorly documented in mammals. Thus, olfactory metabolism has been characterized mainly in vitro and for a limited number of odorants. The automated ex vivo headspace gas-chromatography method that was developed here was validated to account for odorant olfactory metabolism. This method easily permits the measurement of the f…

Interactions between volatiles and lipids in complex systems

1998

Partition equilibria of three aroma compounds in three different biphasic systems were studied by a liquid/liquid partition technique to investigate interactions that occur between volatiles and lipids in biphasic solutions. The lipids used were linoleic acid and ricinoleic acid and tetradecane as a model. The three aroma compounds were ethyl acetate, 2,5-dimethylpyrazine, and oct-1-en-3-ol. The results showed that the intermolecular forces involved were weak. Infrared spectroscopy was then performed on binary systems (tetradecane and linoleic acid or aroma compound) and on ternary systems (tetradecane, linoleic acid, and aroma compound) to determine the nature of the interactions. This met…

Eventual Consistency Formalized

2019

Distribution of computation is well-known, and there are several frameworks, including some formal frameworks, that capture distributed computation. As yet, however, models of distributed computation are based on the idea that data is conceptually centralized. That is, they assume that data, even if it is distributed, is consistent. This assumption is not valid for many of the database systems in use today, where consistency is compromised to ensure availability and partition tolerance. Starting with an informal definition of eventual consistency, this paper explores several measures of inconsistency that quantify how far from consistency a system is. These measures capture key aspects of e…