Search results for "Photometry"

showing 10 items of 797 documents

Experimental and Computational Studies of Hydrogen Bonding and Proton Transfer to [Cp*Fe(dppe)H]

2005

The present contribution reports experimental and computational investigations of the interaction between [Cp*Fe(dppe)H] and different proton donors (HA). The focus is on the structure of the proton transfer intermediates and on the potential energy surface of the proton transfer leading to the dihydrogen complex [Cp*Fe(dppe)(H2)]+. With p-nitrophenol (PNP) a UV/Visible study provides evidence of the formation of the ion-pair stabilized by a hydrogen bond between the nonclassical cation [Cp*Fe(dppe)(H2)]+ and the homoconjugated anion ([AHA]-). With trifluoroacetic acid (TFA), the hydrogen-bonded ion pair containing the simple conjugate base (A-) in equilibrium with the free ions is observed…

Models MolecularSpectrophotometry InfraredProtonPropanolsIronInfrared spectroscopyLigands010402 general chemistryPhotochemistrySensitivity and Specificity01 natural sciencesPolarizable continuum modelCatalysisNitrophenolschemistry.chemical_compoundHydride ligandOrganometallic CompoundsTrifluoroacetic acidMoleculeDihydrogen bondingComputer Simulation[CHIM.COOR]Chemical Sciences/Coordination chemistry10. No inequalityMolecular Structure010405 organic chemistryHydrogen bondChemistryOrganic ChemistryProton transfer mechanismHydrogen BondingGeneral Chemistry0104 chemical sciencesQuantum TheoryThermodynamicsPhysical chemistrySpectrophotometry UltravioletDFT CalculationsDihydrogen complexProtonsSolvent effects
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Comparative Studies on IR, Raman, and Surface Enhanced Raman Scattering Spectroscopy of Dipeptides Containing ΔAla and ΔPhe

2012

Three dipeptides containing dehydroresidues (\DeltaAla, \Delta (Z)Phe, and \Delta (E)Phe) were examined by IR, Raman, and surface-enhanced Raman techniques for the first time. The effect of the size and isomer type of the β -substituent in the dehydroresidue on the conformational structure of the peptide was evaluated by using the analysis of IR and Raman bands. Additionally, SERS spectroscopy provided insight into the adsorption mechanism of these species on the metal surface. SERS spectra were recorded at alkaline pH on the silver sol using visible light excitation. The dehydroresidues studied here strongly influenced the SERS profile of the peptides. The most pronounced SERS signal for a…

Models MolecularSpectrophotometry InfraredSurface PropertiesPhenylalanineAnalytical chemistryMolecular ConformationSpectrum Analysis RamanVibrationMetalchemistry.chemical_compoundsymbols.namesakeAdsorptionDeprotonationSpectrophotometryMaterials ChemistrymedicineCarboxylatePhysical and Theoretical ChemistrySpectroscopyAlaninemedicine.diagnostic_testDipeptidesSurfaces Coatings and FilmsCrystallographychemistryMetalsvisual_artvisual_art.visual_art_mediumsymbolsRaman spectroscopyVisible spectrumJournal of Physical Chemistry B
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Tarantula Hemocyanin Shows Phenoloxidase Activity

1998

An enzyme generally catalyzes one well defined reaction with high specificity and efficiency. We report here in contrast that the copper protein hemocyanin of the tarantula Eurypelma californicum exhibits two different functions. These occur at the same active site. While hemocyanin usually is an oxygen carrier, its function can be transformed totally to monophenoloxidase and o-diphenoloxidase activity after limited proteolysis with trypsin or chymotrypsin. N-acetyldopamine (NADA) is more effectively oxidized than L-dopa or dopamine. This irreversible functional switch of tarantula hemocyanin function is limited to the two subunits b and c of its seven subunit types. A conserved phenylalani…

Models MolecularStereochemistryCopper proteinDopamineProtein subunitmedicine.medical_treatmentPhenylalanineBiochemistrySubstrate SpecificityLevodopaMetalloproteinsMetalloproteinmedicineAnimalsChymotrypsinTrypsinImmunoelectrophoresisMolecular Biologychemistry.chemical_classificationBinding SitesbiologyMonophenol MonooxygenaseActive siteSpidersHemocyaninCell BiologyTrypsinOxygenEnzymeBiochemistrychemistrySpectrophotometryHemocyaninsbiology.proteinElectrophoresis Polyacrylamide GelCoppermedicine.drugJournal of Biological Chemistry
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Characterization of Iron−Carbonyl-Protected Gold Clusters

2009

Ligand-stabilized nanometer-sized gold particles are interesting building blocks for molecular electronics, precursors for catalysts, optical labels for biomolecules and diagnosis, and potential nontoxic carriers for therapeutics. In this work we characterize for the first time, by means of near-infrared and Raman spectroscopy and time-dependent density functional calculations, gold clusters protected with iron-carbonyl ligands, such as {Au(22)[Fe(CO)(4)](12)}(6-) shown in the figure. Surprisingly, our results show that these novel compounds bear many analogues to another, well-studied, class of gold clusters, namely those of thiolate-monolayer-protected gold clusters. Our work adds a new d…

Models MolecularTime FactorsSpectrophotometry InfraredPhosphinesInfraredIronMolecular ConformationElectronsNanotechnologySpectrum Analysis RamanBiochemistryCatalysisCatalysissymbols.namesakeColloid and Surface ChemistryNano-chemistry.chemical_classificationAldehydesChemistryBiomoleculeMolecular electronicsGeneral ChemistryCombinatorial chemistryCharacterization (materials science)Gold particlesLinear ModelssymbolsQuantum TheoryGoldRaman spectroscopyJournal of the American Chemical Society
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8-N(3)-3'-biotinyl-ATP, a novel monofunctional reagent: differences in the F(1)- and V(1)-ATPases by means of the ATP analogue.

2001

A novel photoaffinity label, 8-N(3)-3'-biotinyl-ATP, has been synthesized. The introduction of an additional biotin residue is advantageous for easy detection of labeled proteins. This could be first tested by reaction with the F(1)-ATPase from the thermophilic bacterium PS3 (TF(1)). UV irradiation of TF(1) in the presence of 8-N(3)-3'-biotinyl-ATP results in a nucleotide-dependent binding of the analogue in the noncatalytic alpha and the catalytic beta subunits of TF(1), demonstrating the suitability of this analogue as a potential photoaffinity label. Reaction with the V(1)-ATPase, however, led to labeling of subunit E, which has been suggested as a structural and functional homologue of …

Models MolecularVacuolar Proton-Translocating ATPasesTime FactorsUltraviolet RaysProtein subunitATPaseBiophysicsCoated vesicleBiotinPhotoaffinity LabelsPhotoaffinity LabelsBiochemistryCatalysischemistry.chemical_compoundAdenosine TriphosphateBiotinBacterial ProteinsManducaAnimalsBinding siteMolecular BiologyBinding SitesPhotoaffinity labelingbiologyChemistryCell BiologyProton-Translocating ATPasesBiochemistryModels ChemicalSpectrophotometrySpectrometry Mass Matrix-Assisted Laser Desorption-Ionizationbiology.proteinCattleGamma subunitProtein BindingBiochemical and biophysical research communications
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A Tetracopper(II)-Tetraradical Cuboidal Core and Its Reactivity as a Functional Model of Phenoxazinone Synthase

2007

The coordination chemistry of the tridentate ligand N-(2-hydroxy-3,5-di-tert-butylphenyl)-2-aminobenzylalcohol H3L has been studied with the copper(II) ion. The ligand is noninnocent in the sense that it is readily oxidized in the presence of air to its o-iminobenzosemiquinonato [L*]2- radical form. The crystal structure of the synthesized tetracopper(II)-tetraradical complex [CuII4(L*)4] (1), has been determined by X-ray crystallography at 100 K. Variable-temperature (2-290 K) magnetic susceptibility measurements of complex 1 containing eight paramagnetic centers establish the spin ground state to be diamagnetic (St=0) arising from the antiferromagnetic interactions. Electrochemical measur…

Models Molecularchemistry.chemical_classificationSpectrometry Mass Electrospray IonizationMagnetic Resonance SpectroscopySpectrophotometry InfraredLigandChemistryStereochemistryCrystal structureCrystallography X-RayMagnetic susceptibilityCoordination complexInorganic ChemistryMetalMagneticsCrystallographyParamagnetismvisual_artElectrochemistryvisual_art.visual_art_mediumAntiferromagnetismReactivity (chemistry)Physical and Theoretical ChemistryOxidoreductasesCopperInorganic Chemistry
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Multiple Decay Mechanisms and 2D-UV Spectroscopic Fingerprints of Singlet Excited Solvated Adenine-Uracil Monophosphate

2016

The decay channels of singlet excited adenine uracil monophosphate (ApU) in water are studied with CASPT2//CASSCF:MM potential energy calculations and simulation of the 2D-UV spectroscopic fingerprints with the aim of elucidating the role of the different electronic states of the stacked conformer in the excited state dynamics. The adenine 1La state can decay without a barrier to a conical intersection with the ground state. In contrast, the adenine 1Lb and uracil S(U) states have minima that are separated from the intersections by sizeable barriers. Depending on the backbone conformation, the CT state can undergo inter-base hydrogen transfer and decay to the ground state through a conical …

Models Molecularmolecular electronicsChemistry MultidisciplinaryMolecular electronicsphotophysic2-DIMENSIONAL ELECTRONIC SPECTROSCOPYSTATE DYNAMICSBASE-STACKINGPhotochemistry01 natural sciences[CHIM] Chemical SciencesNUCLEIC-ACIDSQuímica quànticaEspectrofotometriaConformational isomerismComputingMilieux_MISCELLANEOUSphotophysics010304 chemical physicsFull PaperHydrogen bondChemistryChemistry (all)Full PapersMolecular spectroscopy[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryChemistryFOURIER-TRANSFORM SPECTROSCOPYSpectrophotometryExcited statePhysical Sciences1ST-PRINCIPLES SIMULATION03 Chemical SciencesGround stateUridine MonophosphateQuantum chemistryEspectroscòpia molecularmolecular electronic010402 general chemistryMolecular physicsCatalysisUltraviolet visible spectroscopy0103 physical sciencesPhotophysics | Hot Paper[CHIM]Chemical SciencesSinglet stateUV/Vis spectroscopyULTRAFAST INTERNAL-CONVERSIONSpectroscopyLIGHT-HARVESTING COMPLEXab initio calculationScience & Technologyab initio calculationsOrganic ChemistryGeneral ChemistryDNAConical intersectionDNA FingerprintingAdenosine Monophosphate0104 chemical sciences[CHIM.THEO] Chemical Sciences/Theoretical and/or physical chemistryAB-INITIO SIMULATIONSElectrònica molecularMOLECULAR-DYNAMICSSpectrophotometry Ultraviolet
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Interactions of zinc octacarboxyphthalocyanine with selected amino acids and with albumin

2015

Effect of selected amino acids (glycine, l-histidine, l-cysteine, l-serine, l-tryptophan) and albumin on the spectroscopic properties and photostability of zinc octacarboxyphthalocyanine (ZnPcOC) was explored in the phosphate buffer at a pH of 7.0. The photodegradation of ZnPcOC alone and in the presence of amino acids or albumin has been investigated in aqueous phase using UV-366 nm and daylight irradiation. Kinetic analysis showed that the interaction with amino acids or albumin enhances the photostability of ZnPcOC. To answer the question of how zinc phthalocyanine interacts with amino acids extensive DFT calculations were performed. Analysis of the optimized geometry features of ZnPcOC:…

Models Molecularzinc octacarboxyphthalocyanineIndolesUltraviolet Rayschemistry.chemical_element02 engineering and technologyZincIsoindoles010402 general chemistryPhotochemistry01 natural sciencesAnalytical Chemistrychemistry.chemical_compoundPolymer chemistryOrganometallic CompoundsWater environmentAnimalsAmino AcidsPhotodegradationInstrumentationSpectroscopytheoretical calculationschemistry.chemical_classificationPhotolysisAqueous two-phase systemAlbuminSerum Albumin BovineUV–Vis spectra021001 nanoscience & nanotechnologyAtomic and Molecular Physics and Optics0104 chemical sciencesAmino acidphotodynamic therapychemistryZinc CompoundsGlycinePhthalocyanineCattleSpectrophotometry Ultravioletprotein0210 nano-technologyDimerizationamino acidSpectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy
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Structural and Molecular Characterization of meso-Substituted Zinc Porphyrins: A DFT Supported Study

2011

Structural parameters of a range of over 100 meso-substituted zinc porphyrins were reviewed and compared to show how far the nature of the functional group may affect the interatomic distances and bond angles within the porphyrin core. It was proved that even despite evident deformations of the molecular structure, involving twisting of the porphyrin's central plane, the coupled π-bonding system remains flexible and stable. DFT calculations were applied to a number of selected porphyrins representative for the reviewed compounds to emphasize the relevance of theoretical methods in structural investigations of complex macrocyclic molecular systems. Experimental and DFT-simulated IR spectral …

Models Molecularzinc porphyrins; molecular structure; DFT theoretical calculations; IR spectraPorphyrinsSpectrophotometry InfraredStereochemistrySurface PropertiesPharmaceutical Sciencechemistry.chemical_elementInfrared spectroscopyContext (language use)molecular structureZincCrystallography X-RayVibrationArticleAnalytical Chemistrylcsh:QD241-441chemistry.chemical_compoundDFT theoretical calculationslcsh:Organic chemistryComputational chemistryDrug Discoveryzinc porphyrins molecular structure DFT theoretical calculations IR spectraSpectroscopy Fourier Transform InfraredMoleculeMoietyComputer SimulationPyrrolesPhysical and Theoretical ChemistryIR spectraOrganic ChemistryPorphyrinzinc porphyrinsZincMolecular geometrychemistryModels ChemicalChemistry (miscellaneous)Functional groupMicroscopy Electron ScanningMolecular MedicineQuantum TheoryMolecules
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The Modular X- and Gamma-Ray Sensor (MXGS)of the ASIM Payload on the International Space Station

2019

The Modular X- and Gamma-ray Sensor (MXGS) is an imaging and spectral X- and Gamma-ray instrument mounted on the starboard side of the Columbus module on the International Space Station. Together with the Modular Multi-Spectral Imaging Assembly (MMIA) (Chanrion et al. this issue) MXGS constitutes the instruments of the Atmosphere-Space Interactions Monitor (ASIM) (Neubert et al. this issue). The main objectives of MXGS are to image and measure the spectrum of X- and γ-rays from lightning discharges, known as Terrestrial Gamma-ray Flashes (TGFs), and for MMIA to image and perform high speed photometry of Transient Luminous Events (TLEs) and lightning discharges. With these two instruments sp…

Modular Multi-Spectral Imaging AssemblyPhysics - Instrumentation and Detectors010504 meteorology & atmospheric sciencesModular X- and Gamma-ray SensorFOS: Physical sciencesTerrestrial Gamma-ray FlashesInternational Space Station01 natural sciencesPhysics - Space Physics0103 physical sciencesInternational Space Station010303 astronomy & astrophysicsInstrumentation and Methods for Astrophysics (astro-ph.IM)Atmosphere-Space Interaction Monitor0105 earth and related environmental sciencesRemote sensingPhysicsbusiness.industryPayloadGamma rayX- and Gamma-ray detector for spaceAstronomy and AstrophysicsInstrumentation and Detectors (physics.ins-det)Modular designLightningSpace Physics (physics.space-ph)Photometry (astronomy)Space and Planetary ScienceTransient (oscillation)Astrophysics - Instrumentation and Methods for Astrophysicsbusiness
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