Search results for "Phyllosphere"
showing 9 items of 9 documents
Multitrophic interactions in the rhizosphere Rhizosphere microbiology: at the interface of many disciplines and expertises.
2008
The rhizosphere – the soil compartment influenced by the root, including the root itself – is the most-active microbial habitat in soils. Indeed, the release by plant roots of a significant part of their photosynthates promotes microbial abundance and activities in the rhizosphere. This investment made by plants is paid back by microbial functions, which contribute to plant nutrition and protection against soil-borne diseases. Indeed, rhizosphere microorganisms play a major role in plant growth and health and, …
Carbohydrates in plant immunity and plant protection: roles and potential application as foliar sprays.
2014
International audience; Increasing interest is devoted to carbohydrates for their roles in plant immunity. Some of them are elicitors of plant defenses whereas other ones act as signaling molecules in a manner similar to phytohormones. This review first describes the main classes of carbohydrates associated to plant immunity, their role and mode of action. More precisely, the state of the art about perception of "PAMP, MAMP, and DAMP (Pathogen-, Microbe-, Damage-Associated Molecular Patterns) type" oligosaccharides is presented and examples of induced defense events are provided. A particular attention is paid to the structure/activity relationships of these compounds. The role of sugars as…
Editorial: Exploring Plant Rhizosphere, Phyllosphere and Endosphere Microbial Communities to Improve the Management of Polluted Sites
2021
International audience
Colonization of Plant Roots by Pseudomonads and AM Fungi: A Dynamic Phenomenon, Affecting Plant Growth and Health
2008
Because of their enormously large range of plant hosts and role in plant nutrition, arbuscular mycorrhizal (AM) fungi represent an extraordinarily fascinating field of study. Plant growth promotion effects by AM fungi were described as early as 1900 (Sthal 1900) and several data obtained in the second half of the last century support the idea that these microrganisms can act as biocontrol agents (BCA). The extent of root colonization is variable in different plants and under different environmental conditions (Giovannetti and Hepper 1985). Some effects of AM colonization on plants have been reported to be dependent on the degree of root colonization, while others have not. Root exudation an…
Metabarcoding Analysis of Fungal Diversity in the Phyllosphere and Carposphere of Olive (Olea europaea)
2015
The fungal diversity associated with leaves, flowers and fruits of olive (Olea europaea) was investigated in different phenological stages (May, June, October and December) using an implemented metabarcoding approach. It consisted of the 454 pyrosequencing of the fungal ITS2 region and the subsequent phylogenetic analysis of relevant genera along with validated reference sequences. Most sequences were identified up to the species level or were associated with a restricted number of related taxa enabling supported speculations regarding their biological role. Analyses revealed a rich fungal community with 195 different OTUs. Ascomycota was the dominating phyla representing 93.6% of the total…
Community composition and seasonal changes of archaea in coarse and fine air particulate matter
2018
Archaea are ubiquitous in terrestrial and marine environments and play an important role in biogeochemical cycles. Although air acts as the primary medium for their dispersal among different habitats, their diversity and abundance is not well characterized. The main reason for this lack of insight is that archaea are difficult to culture, seem to be low in number in the atmosphere, and have so far been difficult to detect even with molecular genetic approaches. However, to better understand the transport, residence time, and living conditions of microorganisms in the atmosphere as well as their effects on the atmosphere and vice versa, it is essential to study all groups of bioaerosols. Her…
The endophytic microbiota of Citrus limon is transmitted from seed to shoot highlighting differences of bacterial and fungal community structures
2021
AbstractCitrus limon (L.) Burm. F. is an important evergreen fruit crop whose rhizosphere and phyllosphere microbiota have been characterized, while seed microbiota is still unknown. Bacterial and fungal endophytes were isolated from C. limon surface-sterilized seeds. The isolated fungi—belonging to Aspergillus, Quambalaria and Bjerkandera genera—and bacteria—belonging to Staphylococcus genus—were characterized for indoleacetic acid production and phosphate solubilization. Next Generation Sequencing based approaches were then used to characterize the endophytic bacterial and fungal microbiota structures of surface-sterilized C. limon seeds and of shoots obtained under aseptic conditions fr…
Fungal Diversity in the Mediterranean Area
2020
The Special Issue entitled “Fungal Diversity in the Mediterranean Area” aimed at highlighting the role of various organisms in the Mediterranean habitat. The role of fungi at the root and phyllosphere level; the biodiversity in small island territories and the sea; rare forms of fungi never previously found; the commercial, food, and therapeutic value of some ascomycetes and basidiomycetes; the diversity related to fungi associated with galls on plants; and the important role of culture collection for the ex situ conservation of fungal biodiversity are the topics dealt with in this Special Issue.
Bacterial diversity associated with poplar trees grown on a Hg-contaminated site: Community characterization and isolation of Hg-resistant plant grow…
2018
International audience; Industrial waste dumps are rarely colonized by vegetation after they have been abandoned, indicating biological infertility. Revegetation of industrial tailings dumps is thus necessary to prevent wind erosion, metal leaching and has been shown to restore soil functions and ecosystem services. However, little is known about the microbial colonization and community structure of vegetated tailings following the application of restoration technologies. In this study, we investigated the rhizosphere and phyllosphere bacterial communities of a poplar tree plantation within a phytomanagement-based restoration program of a Hg-contaminated site. We used Illumina-based sequenc…