Search results for "Phylogenetics"
showing 10 items of 777 documents
Distinct Clones of Yersinia pestis Caused the Black Death
2010
From AD 1347 to AD 1353, the Black Death killed tens of millions of people in Europe, leaving misery and devastation in its wake, with successive epidemics ravaging the continent until the 18th century. The etiology of this disease has remained highly controversial, ranging from claims based on genetics and the historical descriptions of symptoms that it was caused by Yersinia pestis to conclusions that it must have been caused by other pathogens. It has also been disputed whether plague had the same etiology in northern and southern Europe. Here we identified DNA and protein signatures specific for Y. pestis in human skeletons from mass graves in northern, central and southern Europe that …
Une chrysomèle contre l'ambroisie, est-ce réaliste ?
2016
Context - Despite intensive management practices carried out by stakeholders, common ragweed control is presently not sufficient to limit the spread of this annual invasive plant. Ali classical methods (mowing, chemical weeding, etc.) are limited in terms of efficiency. ln order to achieve a better management in the different habitats occupied by the plant, it is necessary to design innovative methods that could increase contra efficiency. The recent accidental introduction of a ragweed natural enemy in ltalia raises the question of the use of biological control agents. Could the regulation by a new phytophagous insect be considered as an integrated way of management in order to reduce the …
Permineralized coniferophytes from the Autun Basin: specimens from two new localities of Renault zone 3
2015
International audience; Four zones yielding silicified plant remains have been recognized in the Autun Basin by Renault (1893-1896). Zones 2, 3 and 4, characterized by Autunian plants, correspond to the successive formations of Igornay and Muse (lower Autunian), and Surmoulin-Millery (upper Autunian). Their paleobotanical content, together with that preserved as adpressions in the same formations, document paleofloral changes on the western side of the Tethys within a time interval extending from the latest Ghzelian (uppermost Pennsylvanian) to the early Sakmarian (lower Permian) (Broutin et al. 1999). The analyses realized so far indicate a progressive replacement of wetland plants by taxa…
La lutte biologique contre l'ambroisie à feuille d'armoise illustrée par l'exemple d'Ophraella communa : quels intérêts et quelles limites
2016
Common ragweed (Ambrosia artemisiifolia) was introduced in France over 150 years ago and its spreading across France now seems inexorable. The specific biology of this summer annual creates new problems for the managers of the various habitats where the plant can be found. The reduced possibility, or even the impossibility, to use traditional control means in certain environment conditions brings managers to consider biological control as one of the few possible means for slowing down the spread, or even pushing back the distribution area, of this invasive and allergenic plant. With Ophraella communa as an example, a reflection is presented on the benefit-risk balance of the introduction of…
Biological nitrogen fixation for the 21st century
1998
The biodiversity of nitrogen-fixing organisms is huge. Taxonomic and phylogenetic research is needed to structure this diversity, to facilitate communication among scientists, and to increase our understanding of the evolution and biology of diazotrophs. Molecular tools for taxonomic and biodiversity studies of diazotrophic rhizobia, frankiae, cyanobacteria and bacilli are presented in sections 2 to 5. Sections 6 to 9 focus on problems with genus and species assignment.
Characterization of a novel selenium methyltransferase from freshwater bacteria showing strong similarities with the calicheamicin methyltransferase
2004
A novel group of Se-methyltransferases is presented. The genetic determinant, named mmtA, which revealed this group was isolated from selenite and selenate-resistant freshwater bacteria. E. coli expressing mmtA and grown with a Se supplement emitted dimethyl selenide (DMSe) and dimethyl diselenide (DMDSe). Phylogenetic analysis divided MmtA-like bacterial sequences into two clusters, one grouping MmtA with S- and O-methyltransferases, and one grouping UbiE C-methyltransferases. Se methylation by some of these MmtA phyletic neighbours was investigated.
Relationships between Staphylococcus aureus genetic background, virulence factors, agr groups (alleles), and human disease
2002
ABSTRACT The expression of most Staphylococcus aureus virulence factors is controlled by the agr locus, which encodes a two-component signaling pathway whose activating ligand is an agr -encoded autoinducing peptide (AIP). A polymorphism in the amino acid sequence of the AIP and of its corresponding receptor divides S. aureus strains into four major groups. Within a given group, each strain produces a peptide that can activate the agr response in the other member strains, whereas the AIPs belonging to different groups are usually mutually inhibitory. We investigated a possible relationship between agr groups and human S. aureus disease by studying 198 S. aureus strains isolated from 14 asym…
Phylogenetic comparison of symbiotic (nodC and nifH) and 16S rRNA genes in strains of Rhizobium, Mesorhizobium and Bradyrhizobium isolated from Astra…
2000
Various studies reported different conclusions on the phylogenetic relationship between symbiotic (nod and nif) and chromosomal (16S rRNA) genes in rhizobia (Haukka et al, 1998). Some studies suggested that the phylogeny of nod genes could be related with the host plant (Ueda et al., 1995). In a previous study, rhizobia (44 isolates) from Astragalus, Oxytropis and Onobrychis pp have been classified into 14 distinct 16S rRNA gene types independently of their host plant and geographic origin. The majority of isolates were classified within the genus Mesorhizobium, and few within Rhizobium and Bradyrhizobium genera (Laguerre et al., 1997). The aim of the present study was to determine the dive…
Les Gonorynchiformes fossiles : distribution et diversité.
2007
8 pages; Longtemps placés dans les clupéiformes, les Gonorynchiformes ont rejoint les Ostariophysi au sein desquels ils représentent le groupe-frère des Otophysi. La monophylie du groupe est maintenant bien établie tant par les données morphologiques que moléculaires. De nos jours, quatre familles sont représentées par sept genres (dont cinq d'eau douce) et 35 espèces (dont 28 d'eau douce). Les Gonorynchiformes fossiles sont connus depuis le Crétacé basal (soit 145-140 millions d'années) jusqu'au Miocène basal (soit 23,5-20 millions d'années), et plusieurs taxons ont de grandes extensions temporelles. Ils sont représentés par environ 18 genres et 34 espèces. Avec moins de 50 localités fossi…
Crustacés amphipodes de surface (Gammares d'eau douce)
2012
EA MERS CT3; National audience; L’ouvrage de Piscart & Bollache présente une clef de détermination actualisée des amphipodes de surface de la France métropolitaine. Les espèces natives et invasives sont décrites, avec une carte de la répartition de chaque espèce. L’ouvrage est agrémenté d’une partie décrivant l’écologie des amphipodes, leur comportement et leurs pathogènes les plus fréquemment rencontrés.