Search results for "Phylogenetics"

showing 10 items of 777 documents

Coxal combs in the Cydnidae sensu lato and three other related “cydnoid” families – Parastrachiidae, Thaumastellidae, Thyreocoridae (Hemiptera: Heter…

2010

Lis, Jerzy A. (2010): Coxal combs in the Cydnidae sensu lato and three other related " cydnoid " families - Parastrachiidae, Thaumastellidae, Thyreocoridae (Hemiptera: Heteroptera): functional, taxonomic, and phylogenetic significance. Zootaxa 2476: 53-64, DOI: 10.5281/zenodo.893992

food.ingredientDismegistusHeteropteraThyreocoris scarabaeoidesSetaZoologyBiodiversityBiologybiology.organism_classificationHemipterafoodSensuPhylogeneticsAnimal Science and ZoologyCydnidaeEcology Evolution Behavior and SystematicsTaxonomyZootaxa
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Teschoviruses and sapeloviruses in faecal samples from wild boar in Spain

2013

Teschovirus and Sapelovirus are two genera of the Picornaviridae family, comprising highly variable and heterogeneous enteric viruses, commonly found in faecal samples from domestic pigs. Although both of them are also known to infect wild boar, studies on their presence in these wild suids are scarce. The present study aimed at determining the presence of porcine teschovirus (PTV) and sapelovirus (PSV) in free-living wild boar populations, as well as to study their relationships with similar viruses present in pigs. Fresh faecal samples (n = 63) from wild boar were collected in Doñana Biological Reserve (SW Spain) during 2007 and 2011, and analysed using multiplex RT-PCR for the simultaneo…

food.ingredientPicornavirusgenetic structuresTeschovirusSwineCharacterizationSus scrofaRT-PCRPicornaviridaeWild boarMicrobiologyFecesfoodWild boarPhylogeneticsbiology.animalAnimalsMultiplexSapelovirusPhylogenySwine DiseasesPicornaviridae InfectionsGeneral VeterinarybiologyCoinfectionPicornavirusGeneral MedicineAmpliconbiology.organism_classificationVirologyDomestic pigSpainTeschovirusCapsid ProteinsSapelovirus
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Genome rearrangement distances and gene order phylogeny in gamma-Proteobacteria.

2005

Genome rearrangements have been studied in 30 gamma-proteobacterial complete genomes by comparing the order of a reduced set of genes on the chromosome. This set included those genes fulfilling several characteristics, the main ones being that an ortholog was present in every genome and that none of them had been acquired by horizontal gene transfer. Genome rearrangement distances were estimated based on either the number of breakpoints or the minimal number of inversions separating two genomes. Breakpoint and inversion distances were highly correlated, indicating that inversions were the main type of rearrangement event in gamma-Proteobacteria. In general, the progressive increase in seque…

food.ingredientTime FactorsGene Transfer HorizontalYersinia pestisLineage (evolution)BlochmanniaBiologyWigglesworthia glossinidiaGenomeEvolution MolecularfoodPhylogeneticsGene OrderGeneticsEscherichia coliMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyGeneticsGenomePhylogenetic treeModels GeneticModels Theoreticalbiology.organism_classificationBiological EvolutionHorizontal gene transferBuchneraGammaproteobacteriaGenome BacterialMolecular biology and evolution
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Molecular phylogeny of the spider family Sparassidae with focus on the genus Eusparassus and notes on the RTA-clade and ‘Laterigradae’

2013

The phylogeny of the spider family Sparassidae is comprehensively investigated using four molecular markers (mitochondrial COI and 16S; nuclear H3 and 28S). Sparassidae was recovered as monophyletic and as most basal group within the RTA-clade. The higher-level clade Dionycha was not but monophyly of RTA-clade was supported. No affiliation of Sparassidae to other members of the 'Laterigradae' (Philodromidae, Selenopidae and Thomisidae) was observed, and the crab-like posture of this group assumed a result of convergent evolution. Only Philodromidae and Selenopidae were found members of a supported clade, but together with Salticidae and Corinnidae, while Thomisidae was nested within the hig…

food.ingredientZoologySpidersSequence Analysis DNABiologybiology.organism_classificationBiological EvolutionElectron Transport Complex IVHistonesPseudomicrommataMonophylyfoodRNA Ribosomal 16SLycosoideaPolyphylyRNA Ribosomal 28SMolecular phylogeneticsGeneticsSelenopidaeAnimalsThomisidaeCladeMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsMolecular Phylogenetics and Evolution
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A new Lagomorph from the late Miocene of Chad (central Africa)

2007

A new species of the genus Serengetilagus, here named S. tchadensis n. sp., is described from Toros Menalla deposits, Late Miocene of Djurab Erg (North Chad, central Africa). It shows primitive features, such as a simple archaeolagine-type p3, with only two main external folds, and upper cheek teeth strongly widened with wear. Its size and skeletal features resemble S. praecapensis from the Middle Pliocene of Laetoli (Tanzania). They differ in several cranial and dental features (choanae width, zygoma, orbits, basicranial-basifacial angle, lack of hypoflexus in P2, short and asymmetric hypoflexus in P3-M2, lack of lingual folds in p3, etc). Individual variations in S. tchadensis n. sp. appr…

geographySubfamilygeography.geographical_feature_categoryHypolagusbiologyPaleontologyCentral africaLate Miocenebiology.organism_classificationQE701-760late miocene chad africa mammalia leporidae serengetilagus phylogeny mode of life.PaleontologyErg (landform)PhylogeneticsGenus[SDU.STU.PG] Sciences of the Universe [physics]/Earth Sciences/Paleontology[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyComputingMilieux_MISCELLANEOUS
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The identity and geographical distribution of Jacobaea vulgaris subsp. gotlandica , supposedly endemic to Gotland and Öland (Sweden)-the importance o…

2009

The identity of Jacobaea vulgaris Gaertn. subsp. gotlandica (Neum.) B. Nord., hitherto considered an endemic to the Swedish islands Oland and Gotland, was investigated using nrITS and trnT-trnL intergenic spacer sequences and a broad sample of species and accessions particularly of J. vulgaris. We found that J. vulgaris subsp. gotlandica is a distinct evolutionary lineage more widespread in Europe than previously thought and may be a southeastern European steppe floristic element with outliers on the large Baltic islands. Our entirely unexpected findings underline the need of multiple intraspecific sampling in species-level phylogenetic studies.

geographygeography.geographical_feature_categoryJacobaea vulgarisbiologyEcologySteppeIntergenic spacerJacobaeaPlant Sciencebiology.organism_classificationFloristicsIntraspecific competitionMolecular phylogeneticsTaxonomy (biology)Ecology Evolution Behavior and SystematicsTAXON
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New skulls of the basal sauropodomorph Plateosaurus trossingensis from Frick, Switzerland: is there more than one species?

2021

The Triassic basal sauropodomorph Plateosaurus trossingensis is well-known from mass accumulations at the German localities of Trossingen and Halberstadt and the Swiss locality of Frick, and is significant especially regarding its ta-phonomy and proposed developmental plasticity. These implications, however, rely on the assumption that this material derives from a single species, which has been questioned. Here we describe new skull material from Frick including eight complete and six partial skulls, more than doubling the number of known skulls of P. trossingensis. This exceptional sample size allows for gaining a deeper understanding of variability that may occur in a single species. The …

inosauriabiologypreservationPlateosaurusPaleontologyAnatomybiology.organism_classificationTriassicdinosauriaskull ana-tomyskull anatomylcsh:GN282-286.7Basal (phylogenetics)SauropodomorphaGeographyontogenylcsh:Paleontologylcsh:Fossil man. Human paleontologyPlateosauruslcsh:QE701-760intraspecific variabilitySwitzerlandActa Palaeontologica Polonica
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Resurrection of Pomphorhynchus tereticollis (Rudolphi, 1809) (Acanthocephala: Pomphorhynchidae) based on new morphological and molecular data

2011

Abstract Pomphorhynchus tereticollis (Rudolphi, 1809) is here redescribed on the basis of Rudolphi’s material, deposited in the Museum für Naturkunde Berlin, and on acanthocephalans recently collected from the type host Platichthys flessus (L.) and the region embodying the type locality. Out of the paratypes of P. tereticollis, the lectotype and paralectotypes have been designated. Their morphology fits well with that of newly collected material of P. tereticollis dissected from the type fish host from the Baltic coast near Stralsund. The resurrection of P. tereticollis, previously considered a synonym of Pomphorhynchus laevis (Zoega in Müller, 1779), is supported by several morphological f…

lectotypeMedicine (General)[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyBarbelredescriptionbiologyAgriculture (General)PomphorhynchidaeZoologyAnatomybiology.organism_classificationS1-972Pomphorhynchus laevisProboscis (genus)Genetic divergenceR5-920Synonym (taxonomy)paralectotypegenetic differentiationAnimal Science and ZoologyParasitologyPomphorhynchus laevisType localityAcanthocephala[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyHelminthologia
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Changes of Angiotensin Converting Enzyme (Ace) Levels During Activation of the Renin-Angiotensin-Aldosterone System (RAAs)

1987

The aim of this study was to evaluate the changes of ACE levels during RAAs activation induced by: 1) a continuous graded bicycle ergometer test performed in a group of 15 males health youths aged between 21 and 30 years, with average age of 25.8 +/- 2.85 years; 2) i.m. injection of 20 mg of frusemide in 11 health youths (10 males and 1 female), aged between 20 and 30 years, with average age of 24.09 +/- 2.77 years; 3) dialytic treatment in 25 patients (12 males and 13 females), suffering from chronic renal failure, aged between 26 and 68 years, with average age of 54 +/- 15.42 years. Plasmatic renin activity (PRA), aldosterone (ALD) and ACE levels were determined by RIA in basal conditions…

medicine.medical_specialtyAldosteronebiologybusiness.industrymedicine.medical_treatmentAngiotensin-converting enzymePlasma renin activityBasal (phylogenetics)chemistry.chemical_compoundEndocrinologychemistryInternal medicineRenin–angiotensin systembiology.proteinMedicineChronic renal failureBicycle ergometerbusinessDialysis
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Correlation between basal bilirubin levels and survival in advanced colorectal carcinoma treated with CPT-11-based chemotherapy: A study of the Grupp…

2008

AbstractBackgroundThis study was carried out to evaluate total basal bilirubin levels as a predictive factor for survival and toxicity in patients with advanced colorectal carcinoma treated with CTP-11-based regimens.Patients and methodsThe analysis was carried out on a data base including 287 patients affected by advanced colorectal carcinoma all treated with CPT-11 plus bolus and continuous venous infusion intravenous folinic acid and 5-fluorouracil on a biweekly schedule (FOLFIRI regimen). Patients were divided into four groups according to basal bilirubin levels as follows: 0.50 and 1.00 and 1.50mg/dl. Analysis of overall median survival and time-to-progression were correlated to perfor…

medicine.medical_specialtyCancer ResearchColorectal cancerBilirubinmedicine.medical_treatmentGastroenterologyFolinic acidchemistry.chemical_compoundBasal (phylogenetics)Internal medicineCPT-11FOLFIRI RegimenmedicineChemotherapyPerformance statusToxicitybusiness.industrymedicine.diseaseColorectal cancerSurgeryIrinotecanchemistryBilurubinOncologybusinessmedicine.drugEuropean Journal of Cancer Supplements
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