Search results for "Pipeline"
showing 10 items of 157 documents
STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of omics data
2018
AbstractSingle-cell transcriptomic assays have enabled the de novo reconstruction of lineage differentiation trajectories, along with the characterization of cellular heterogeneity and state transitions. Several methods have been developed for reconstructing developmental trajectories from single-cell transcriptomic data, but efforts on analyzing single-cell epigenomic data and on trajectory visualization remain limited. Here we present STREAM, an interactive pipeline capable of disentangling and visualizing complex branching trajectories from both single-cell transcriptomic and epigenomic data.
Fatigue of Mooring Chains Connected to Offshore Floating Structures Considering Out of Plane Bending Effects
2019
Abstract Reliability against fatigue fracture is an issue of major concern in the design of offshore mooring systems with chain segments. The present paper describes the investigation of the effect of OPB (out of plane bending) and IPB (in plane bending) loading modes on the fatigue performance of chain links in critical positions. The hang-off design at the floater is based on long rods with bearings at the connection points to the floating structure. The purpose of the paper is to shed some light on possible design improvements on the connection design when using the available design guidelines for calculation of combined Tension-Bending fatigue in the mooring line. A challenge when using…
Small changes, big impacts: Geographic expansion in small-scale fisheries
2020
Abstract Small-scale fisheries are an important, yet neglected, millenarian activity that has been undergoing significant changes that threaten its future. Understanding how this activity is spatially distributed and the factors that drive its use of the marine space over time can shed some light on how fishing efforts and their impacts have moved over different parts of coastal marine ecosystems. This study investigated changes to the spatial distribution of small-scale fisheries along the Brazilian equatorial region between 1994 and 2014 and the factors, from ecological to socioeconomic, that influenced this shift. Bayesian hierarchical spatial models were used together with environmental…
A distributed genetic algorithm for restoration of vertical line scratches
2008
This paper reports a distributed algorithm for the restoration of still frames corrupted by vertical line scratches. The restoration is here approached as an optimisation problem, and is solved using an ad-hoc Genetic Algorithm. The distributed algorithm is designed following a pipeline logical structure. The front end is a network of standard workstations with heterogeneous operating systems. The quality of image is appreciable and the computational time is quite low with respect the sequential version.
Modeling of Offshore Crane and Marine Craft in Wave Motion
2020
Safe handling of heavy payloads in an offshore environment requires careful planning and depends on the interaction between a crane and a vessel. This paper investigates the coupled dynamics between a multipurpose crane with payload, and an offshore carrying vessel. A classical multi-body model is derived using holonomic constraints and Newton-Euler kinetics. The resulting index-3 system of differential-algebraic equation (DAE) is transformed into an index-1 system and solved using commonly used numerical ode solvers. Numerical simulations are carried out to show that the proposed models behave in a physically realistic manner. © 2020 IEEE. Personal use of this material is permitted. Permis…
Effect of the Converging Pipe on the Performance of a Lucid Spherical Rotor
2018
Lucid spherical rotor is a cross-flow rotor developed to be installed within a pipeline. The purpose of installing this type of rotor is to collect excess energy available in gravity-fed water pipelines. In order to enhance the efficiency of the rotor which is installed in a channel, this paper aims to study the performance of Lucid spherical rotor with converging pipe. Numerical investigations were carried out to analyze the effect of the converging pipe on the performance of the rotor. Numerical simulations have been carried out using the unsteady Reynolds-averaged Navier–Stokes equations in conjunction with the realizable $$k-{\varepsilon }$$ turbulence model. The validation of the numer…
Research on the internal pressure behavior of metal gas distribution pipelines with different types of tubing defects
2017
The paper aims to approach an important subject related to natural gas distribution networks which, depending on the expansion of the localities, are composed of intercommunicating pipes, pressure reducing stations and branch connections fittings. The urban networks are the most complex ones and the rural areas networks are the simplest. However, irrespective of their installation, they must meet the safety operating requirements as much as possible. According to standards, all these components must be tight and pressure resistant. In this regard, we intend to approach a very important issue related to the behavior of the tubular steel material showing corrosion and/or material defects, and…
A Model for a Data Acquisition Solution for a Medium Size Accelerator Laboratory
2005
A pipeline for variants discovery using next-generation DNA sequencing data
2017
Recent advances in next generation sequencing (NGS) technology provide a cost-effective approach to large-scale resequencing of livestock samples in order to study several biological phenomena. NGS produces millions of short DNA sequences that require an unbiased way to make possible comprehensive searches for variation to identify putative causative mutations for economically important traits. The aim of this work was to present a bioinformatics pipeline analysis for variants discovery in ovine genome. A total of 30 individuals belonging to Valle del Belice dairy ewes was used for whole genome sequencing of pooled libraries prepared using Illumina Nextera Kit. Paired-end sequencing was car…
Intrakraniālo aneirismu endovaskulāra ārstēšana ar plūsmas novirzītāju stentiem
2016
Darba mērķis ir zinātniski pamatot intrakraniālu aneirismu endovaskulāru ārstēšanu ar plūsmas novadītājiem. Darba uzdevumi 1. apkopot esošos teorētiskos datu rezultātus par intrakraniālu aneirismu patoloģiju, anamnēzi un ārstēšanu, kur lietoti plūsmas novirzītāji; 2. apkopot PSKUS plūsmas novirzītāju lietošanas pieredzi intrakraniālu aneirismu ārstēšanā. 3. atrast saistību starp intrakraniālo stentu implantāciju un mātes asinsvada remodelāciju, aneirismas maisa mazināšanos. Metodes tika veikts retrospektīvs pētījums, kuram ētikas komisijas atļauju deva LU Eksperimentālās un klīniskās medicīnas institūta Zinātniskās izpētes ētikas komisija. Pētījumā tika analizēts 31 intrakraniālo aneirismu …